; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G010550 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G010550
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCytochrome c550
Genome locationchr08:19157200..19158593
RNA-Seq ExpressionLsi08G010550
SyntenyLsi08G010550
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB3480813.1 unnamed protein product [Digitaria exilis]4.8e-0529.28Show/hide
Query:  PICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKFLACEIEFEREPKAYFAGQESITISLLCIYPMAMAPTGDFLTSQGQPLVRTSPSFV
        PIC G  P +RL   SS  R  A  ++G   P+ LFP  +   +     +     P+++  G  +      C     M PT    +      +RT     
Subjt:  PICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKFLACEIEFEREPKAYFAGQESITISLLCIYPMAMAPTGDFLTSQGQPLVRTSPSFV

Query:  ESVQTLSFGSLQMDSGSSPVKRFTDMSMSTSSVKFPISSGMFPFFSNEISL-GISPLRKFPLSSRSTRDVMFPIDRGISPS
              SF +LQ  +G  P  R +D S ++S         +   FSN  ++ GISP+R F   SR TR +  P D GISP+
Subjt:  ESVQTLSFGSLQMDSGSSPVKRFTDMSMSTSSVKFPISSGMFPFFSNEISL-GISPLRKFPLSSRSTRDVMFPIDRGISPS
GER40230.1 cytochrome c550 [Striga asiatica]3.2e-0936.55Show/hide
Query:  KLPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKFLACEIEFEREPKAYFAGQESITISLLCIYPMAMAPTGDFLTSQGQPLVRTSPS
        +LPI  G GP++R  LRS  TRL A  ISGGI PEI FPC  +SDKF A  I     P         I  S L +               G   +     
Subjt:  KLPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKFLACEIEFEREPKAYFAGQESITISLLCIYPMAMAPTGDFLTSQGQPLVRTSPS

Query:  FVESVQTLSFGSLQMDSGSSPVKRFTDMSMSTSSVKFPISSGMFP
        F    + LSF  LQ  SGS P   F+D S  T     P   G  P
Subjt:  FVESVQTLSFGSLQMDSGSSPVKRFTDMSMSTSSVKFPISSGMFP
PON56471.1 hypothetical protein TorRG33x02_296220 [Trema orientale]1.4e-0766.04Show/hide
Query:  KLPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKFLACEIE
        KLPI  G GPERRLLL S  T+L A EI  G TPEIL  C NNSDKF A  IE
Subjt:  KLPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKFLACEIE
TrEMBL top hitse value%identityAlignment
A0A2P5C645 Uncharacterized protein6.6e-0866.04Show/hide
Query:  KLPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKFLACEIE
        KLPI  G GPERRLLL S  T+L A EI  G TPEIL  C NNSDKF A  IE
Subjt:  KLPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKFLACEIE
A0A5A7Q4V2 Cytochrome c5501.6e-0936.55Show/hide
Query:  KLPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKFLACEIEFEREPKAYFAGQESITISLLCIYPMAMAPTGDFLTSQGQPLVRTSPS
        +LPI  G GP++R  LRS  TRL A  ISGGI PEI FPC  +SDKF A  I     P         I  S L +               G   +     
Subjt:  KLPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKFLACEIEFEREPKAYFAGQESITISLLCIYPMAMAPTGDFLTSQGQPLVRTSPS

Query:  FVESVQTLSFGSLQMDSGSSPVKRFTDMSMSTSSVKFPISSGMFP
        F    + LSF  LQ  SGS P   F+D S  T     P   G  P
Subjt:  FVESVQTLSFGSLQMDSGSSPVKRFTDMSMSTSSVKFPISSGMFP
A0A7N0V1S0 Uncharacterized protein2.0e-0449.15Show/hide
Query:  MKLPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKFLACEIEFEREP
        ++ PI +G   ERRL L S+FTR  A EIS G  PE +F   N+SDK  A  I F  EP
Subjt:  MKLPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKFLACEIEFEREP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTGCCAATCTGCGACGGCACTGGACCGGAGAGAAGATTGTTGCTGAGATCAAGCTTCACCAGATTGGCTGCTCCCGAAATCTCTGGTGGTATAACTCCAGAAAT
CCTGTTTCCTTGTAAGAACAACTCTGACAAGTTTCTTGCCTGTGAGATAGAATTTGAAAGGGAACCAAAAGCCTATTTTGCAGGACAAGAAAGTATAACAATTTCCCTCC
TCTGCATATATCCAATGGCAATGGCCCCAACAGGCGATTTTCTGACAAGTCAAGGACAACCATTGGTGAGAACTTCCCCAAGTTTTGTGGAATCTGTCCAAACTTTAAGC
TTTGGGAGTTTACAAATGGATTCTGGAAGCTCTCCTGTCAAAAGGTTCACTGACATGTCCATGTCAACAAGCTCCGTTAAATTTCCAATCTCCTCTGGTATGTTTCCTTT
CTTCAGCAATGAGATTTCTCTTGGAATCTCTCCCTTGAGAAAGTTCCCACTTAGTTCGAGATCAACAAGAGACGTCATGTTCCCTATCGATCGCGGGATTTCGCCATCTA
ACATACAGGTTGTCAAGACCATAGATTTCAGCTTTGTCAGGCTGGAGATCTTCTCAGGCAACTTCCATAAGTTGAGCACCTCAAGATTAACAAGGTCGAAAACCGACATG
GGAAAATCACCAATCTGGGATAGTTCCATTGAGATACAAAGAGCTCATGTTAAGTTCTTCAATGACAGAGCAGTTGGTGATTCCTGGAGGAAAATGACCGTAAAAACCAG
TACCAGCGAGACGAAGAACTCTCAGCTCTGGCAGAAGGATTTGCCTCCTGAAAGATCCCAATCAGACAGGAACTCTCCTGAGGCTGTCTTTTGCATGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAATTGCCAATCTGCGACGGCACTGGACCGGAGAGAAGATTGTTGCTGAGATCAAGCTTCACCAGATTGGCTGCTCCCGAAATCTCTGGTGGTATAACTCCAGAAAT
CCTGTTTCCTTGTAAGAACAACTCTGACAAGTTTCTTGCCTGTGAGATAGAATTTGAAAGGGAACCAAAAGCCTATTTTGCAGGACAAGAAAGTATAACAATTTCCCTCC
TCTGCATATATCCAATGGCAATGGCCCCAACAGGCGATTTTCTGACAAGTCAAGGACAACCATTGGTGAGAACTTCCCCAAGTTTTGTGGAATCTGTCCAAACTTTAAGC
TTTGGGAGTTTACAAATGGATTCTGGAAGCTCTCCTGTCAAAAGGTTCACTGACATGTCCATGTCAACAAGCTCCGTTAAATTTCCAATCTCCTCTGGTATGTTTCCTTT
CTTCAGCAATGAGATTTCTCTTGGAATCTCTCCCTTGAGAAAGTTCCCACTTAGTTCGAGATCAACAAGAGACGTCATGTTCCCTATCGATCGCGGGATTTCGCCATCTA
ACATACAGGTTGTCAAGACCATAGATTTCAGCTTTGTCAGGCTGGAGATCTTCTCAGGCAACTTCCATAAGTTGAGCACCTCAAGATTAACAAGGTCGAAAACCGACATG
GGAAAATCACCAATCTGGGATAGTTCCATTGAGATACAAAGAGCTCATGTTAAGTTCTTCAATGACAGAGCAGTTGGTGATTCCTGGAGGAAAATGACCGTAAAAACCAG
TACCAGCGAGACGAAGAACTCTCAGCTCTGGCAGAAGGATTTGCCTCCTGAAAGATCCCAATCAGACAGGAACTCTCCTGAGGCTGTCTTTTGCATGAGATAG
Protein sequenceShow/hide protein sequence
MKLPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKFLACEIEFEREPKAYFAGQESITISLLCIYPMAMAPTGDFLTSQGQPLVRTSPSFVESVQTLS
FGSLQMDSGSSPVKRFTDMSMSTSSVKFPISSGMFPFFSNEISLGISPLRKFPLSSRSTRDVMFPIDRGISPSNIQVVKTIDFSFVRLEIFSGNFHKLSTSRLTRSKTDM
GKSPIWDSSIEIQRAHVKFFNDRAVGDSWRKMTVKTSTSETKNSQLWQKDLPPERSQSDRNSPEAVFCMR