; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G010560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G010560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:19158706..19162154
RNA-Seq ExpressionLsi08G010560
SyntenyLsi08G010560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7817081.1 hypothetical protein G2W53_031050 [Senna tora]3.6e-0550Show/hide
Query:  MAILRALIMSSLNNPFNFLSRISRTP-----SFVSTLFETQNTMFLFSPYSVSIGFFPVINSINTTPKLYTS
        +A+ R  I++      +++S I ++      S + TL  TQ TM LFSPYSVSIG FPV NSI+TTPKLYTS
Subjt:  MAILRALIMSSLNNPFNFLSRISRTP-----SFVSTLFETQNTMFLFSPYSVSIGFFPVINSINTTPKLYTS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTTAGTATTTATTACATATTCTCCTTGGTCCCCTCTTTCTCACTTCTTTTCTTGGACATACCATTCAAGGCACAAGCTGAATCCATCGTCGACGAATCAATCCC
TATCTTGGTTGTTGACTACAAACTCGATGTCTTCATGAGCAACACTCAAATAACTTACAAGCTTGAAGAATCTTTAAGCATTTATGAACCTGAGGACCACAAGCTGAACC
ACCTCTCCCATGGCGGGTCGAAGCACTGGATTCTTCGAATGGCGATTCTCAGAGCCTTAATTATGTCATCCCTGAACAACCCTTTTAATTTCTTGTCAAGAATCTCAAGA
ACCCCTTCTTTTGTGTCCACTTTATTCGAAACCCAGAATACAATGTTCTTGTTTTCTCCATACTCTGTTTCAATCGGCTTCTTCCCTGTAATCAACTCCATTAACACTAC
TCCAAAGCTGTACACATCGCACTTGGTTGTTGCCTTTGATGAATATGCATATTCTGACTTTGGCGATGCCGAAATCTGCAACTTTGGGTTGCGAGGCCTTGGGCGATTCC
CACCGCGATGCGGTGGCGCGTGGGCCAATCAAGATGAATCCACCCTTTATGAAGGGCGTCCCATAAATTGCCGTTTGGCATGTATTCGTAAACCAGAAGGCTGCAATTTA
GACCTGAAAAGTAGCTATAGAGTTTCACGATGTTCTTATGCCTTATTGTTCCTAGGGTTTCGACCTCTGTTTTCAATTCTTTGTCGAAGAGATGTTTCGCTCTTCGATTC
CATAGCCTCTTCACGGCGACGATTTCTCCTTTTCCGAGCTCGATTTTGTAGACTGTTCCTGATCCACCGTGGCCCACAATGTTCTTTTCCACCATGGCTTCGAGAATCCT
GCTTTGGTCGAAGTTCTGCAAATGGAAGAATGACGAAGAAAGGGTTTCTTCGTTTTCGATCTCTGATAAACAGGACGGCGCCGGTGAAGAAGATTAGCAATGGAATGACG
ATTCCCCAGATGAAATTTAGACGTGAAATGAAATACGCCGGTGGAACACATAGATTTGGGTTGCCGGAGAAGCTATCTGCTAACCCTTGTTTGATTAAGGACAAAGGAAT
TGCACCGGAAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTTAGTATTTATTACATATTCTCCTTGGTCCCCTCTTTCTCACTTCTTTTCTTGGACATACCATTCAAGGCACAAGCTGAATCCATCGTCGACGAATCAATCCC
TATCTTGGTTGTTGACTACAAACTCGATGTCTTCATGAGCAACACTCAAATAACTTACAAGCTTGAAGAATCTTTAAGCATTTATGAACCTGAGGACCACAAGCTGAACC
ACCTCTCCCATGGCGGGTCGAAGCACTGGATTCTTCGAATGGCGATTCTCAGAGCCTTAATTATGTCATCCCTGAACAACCCTTTTAATTTCTTGTCAAGAATCTCAAGA
ACCCCTTCTTTTGTGTCCACTTTATTCGAAACCCAGAATACAATGTTCTTGTTTTCTCCATACTCTGTTTCAATCGGCTTCTTCCCTGTAATCAACTCCATTAACACTAC
TCCAAAGCTGTACACATCGCACTTGGTTGTTGCCTTTGATGAATATGCATATTCTGACTTTGGCGATGCCGAAATCTGCAACTTTGGGTTGCGAGGCCTTGGGCGATTCC
CACCGCGATGCGGTGGCGCGTGGGCCAATCAAGATGAATCCACCCTTTATGAAGGGCGTCCCATAAATTGCCGTTTGGCATGTATTCGTAAACCAGAAGGCTGCAATTTA
GACCTGAAAAGTAGCTATAGAGTTTCACGATGTTCTTATGCCTTATTGTTCCTAGGGTTTCGACCTCTGTTTTCAATTCTTTGTCGAAGAGATGTTTCGCTCTTCGATTC
CATAGCCTCTTCACGGCGACGATTTCTCCTTTTCCGAGCTCGATTTTGTAGACTGTTCCTGATCCACCGTGGCCCACAATGTTCTTTTCCACCATGGCTTCGAGAATCCT
GCTTTGGTCGAAGTTCTGCAAATGGAAGAATGACGAAGAAAGGGTTTCTTCGTTTTCGATCTCTGATAAACAGGACGGCGCCGGTGAAGAAGATTAGCAATGGAATGACG
ATTCCCCAGATGAAATTTAGACGTGAAATGAAATACGCCGGTGGAACACATAGATTTGGGTTGCCGGAGAAGCTATCTGCTAACCCTTGTTTGATTAAGGACAAAGGAAT
TGCACCGGAAAGTTGA
Protein sequenceShow/hide protein sequence
MEVSIYYIFSLVPSFSLLFLDIPFKAQAESIVDESIPILVVDYKLDVFMSNTQITYKLEESLSIYEPEDHKLNHLSHGGSKHWILRMAILRALIMSSLNNPFNFLSRISR
TPSFVSTLFETQNTMFLFSPYSVSIGFFPVINSINTTPKLYTSHLVVAFDEYAYSDFGDAEICNFGLRGLGRFPPRCGGAWANQDESTLYEGRPINCRLACIRKPEGCNL
DLKSSYRVSRCSYALLFLGFRPLFSILCRRDVSLFDSIASSRRRFLLFRARFCRLFLIHRGPQCSFPPWLRESCFGRSSANGRMTKKGFLRFRSLINRTAPVKKISNGMT
IPQMKFRREMKYAGGTHRFGLPEKLSANPCLIKDKGIAPES