; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G010590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G010590
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationchr08:19209648..19210345
RNA-Seq ExpressionLsi08G010590
SyntenyLsi08G010590
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065061.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo var. makuwa]2.5e-4772.26Show/hide
Query:  MGSLQNWYRIKN--VSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAA-------EKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALH
        MGS Q W+R +N  VSI LLFLSV ILI VTSI EGRGIQ      +S   VA        EK+GMMMRNQIGSRPPSCRR+C ECGGHCEAVQVPVALH
Subjt:  MGSLQNWYRIKN--VSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAA-------EKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALH

Query:  DSHQNRRK--RRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
        DS+QN++K  RRR SS  +FS +SKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  DSHQNRRK--RRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP

XP_004148430.2 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus]2.1e-4975.5Show/hide
Query:  MGSLQNWYRIKN--VSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAA---EKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSHQ
        MGS Q W+R +N  +SI LLFLSV ILI VTSI EGRGIQ ++   R    VA    EK+GMMMRNQIGSRPPSCRR+CRECGGHCEAVQVPVALHDS+Q
Subjt:  MGSLQNWYRIKN--VSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAA---EKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSHQ

Query:  NRRK--RRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
        N+RK  R+R SSS +FS NSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  NRRK--RRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP

XP_008444980.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo]1.9e-4772.73Show/hide
Query:  MGSLQNWYRIKN--VSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAA------EKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHD
        MGS Q W+R +N  VSI LLFLSV ILI VTSI EGRGIQ      +S   VA       EK+GMMMRNQIGSRPPSCRR+C ECGGHCEAVQVPVALHD
Subjt:  MGSLQNWYRIKN--VSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAA------EKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHD

Query:  SHQNRRK--RRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
        S+QN++K  RRR SS  +FS +SKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  SHQNRRK--RRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP

XP_022131875.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Momordica charantia]9.0e-4568.15Show/hide
Query:  MGSLQNWYRIK-NVSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGR-----SELPVAAEKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSH
        MGSLQNW+R K ++SI LL LSVSI + V S+AEGRGI   LM GR        P   EKVG M+R+QIGSRPPSCRRRCRECGGHCEA+QVPVALHDS 
Subjt:  MGSLQNWYRIK-NVSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGR-----SELPVAAEKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSH

Query:  QNRRKRRRSSSSSHFSA-------NSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
        QN+RK+R    SSHF A        S  D+ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  QNRRKRRRSSSSSHFSA-------NSKHDVALSSEDETSNYKPISWKCKCGNFIFNP

XP_038886514.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Benincasa hispida]3.1e-6185.81Show/hide
Query:  MGSLQNWYRIKNVSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELP---VAAEKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHD-SHQN
        MGS QNW+RIK+VSI LLFLSVSILIHVTSI EGRGIQGSL  GRSE P    A EK GMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHD SHQN
Subjt:  MGSLQNWYRIKNVSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELP---VAAEKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHD-SHQN

Query:  RRKRRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
        +RK +R+S SSHFS NSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  RRKRRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP

TrEMBL top hitse value%identityAlignment
A0A0A0LPQ0 Epidermal patterning factor-like protein1.0e-4975.5Show/hide
Query:  MGSLQNWYRIKN--VSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAA---EKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSHQ
        MGS Q W+R +N  +SI LLFLSV ILI VTSI EGRGIQ ++   R    VA    EK+GMMMRNQIGSRPPSCRR+CRECGGHCEAVQVPVALHDS+Q
Subjt:  MGSLQNWYRIKN--VSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAA---EKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSHQ

Query:  NRRK--RRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
        N+RK  R+R SSS +FS NSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  NRRK--RRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP

A0A1S3BBM2 Epidermal patterning factor-like protein9.4e-4872.73Show/hide
Query:  MGSLQNWYRIKN--VSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAA------EKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHD
        MGS Q W+R +N  VSI LLFLSV ILI VTSI EGRGIQ      +S   VA       EK+GMMMRNQIGSRPPSCRR+C ECGGHCEAVQVPVALHD
Subjt:  MGSLQNWYRIKN--VSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAA------EKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHD

Query:  SHQNRRK--RRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
        S+QN++K  RRR SS  +FS +SKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  SHQNRRK--RRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP

A0A5A7VH43 Epidermal patterning factor-like protein1.2e-4772.26Show/hide
Query:  MGSLQNWYRIKN--VSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAA-------EKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALH
        MGS Q W+R +N  VSI LLFLSV ILI VTSI EGRGIQ      +S   VA        EK+GMMMRNQIGSRPPSCRR+C ECGGHCEAVQVPVALH
Subjt:  MGSLQNWYRIKN--VSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAA-------EKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALH

Query:  DSHQNRRK--RRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
        DS+QN++K  RRR SS  +FS +SKHDVALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  DSHQNRRK--RRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP

A0A6J1BQW9 Epidermal patterning factor-like protein4.4e-4568.15Show/hide
Query:  MGSLQNWYRIK-NVSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGR-----SELPVAAEKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSH
        MGSLQNW+R K ++SI LL LSVSI + V S+AEGRGI   LM GR        P   EKVG M+R+QIGSRPPSCRRRCRECGGHCEA+QVPVALHDS 
Subjt:  MGSLQNWYRIK-NVSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGR-----SELPVAAEKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSH

Query:  QNRRKRRRSSSSSHFSA-------NSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
        QN+RK+R    SSHF A        S  D+ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  QNRRKRRRSSSSSHFSA-------NSKHDVALSSEDETSNYKPISWKCKCGNFIFNP

A0A6J1GIN2 Epidermal patterning factor-like protein6.3e-4467.31Show/hide
Query:  MGSLQNWYRIKNVSI-FLLFLSVSILIHVTSIAEGRGIQGSLMVGR--SELPVAAEKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDS-HQN
        MGSLQ W+R K++SI FL FLSV + IH+TSIAEGRG Q  LM  R   E P  AE V M  R+QIGS+PPSCRRRCRECGG CEA+QVPVA+HDS HQ 
Subjt:  MGSLQNWYRIKNVSI-FLLFLSVSILIHVTSIAEGRGIQGSLMVGR--SELPVAAEKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDS-HQN

Query:  RRKRRRSSSSSHF-------SANSKHD-VALSSEDETSNYKPISWKCKCGNFIFNP
        +R+R R    SHF       S++SKH+ VALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  RRKRRRSSSSSHF-------SANSKHD-VALSSEDETSNYKPISWKCKCGNFIFNP

SwissProt top hitse value%identityAlignment
Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 11.1e-0533.33Show/hide
Query:  PVAAEKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSHQNRRKRRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
        P++ +   +  + ++GS PPSC  RC  C   C A+QVP       ++R  R    S       S     L   D+ SNYKP+ WKC C    +NP
Subjt:  PVAAEKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSHQNRRKRRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 21.1e-1643.28Show/hide
Query:  NVSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAAEKVGMMMRNQIGSRPPSCRR-RCRECGGHCEAVQVPVALHDSHQNRRKRRRSSSSSHFS
        N+S FLL L +    H + +A GR    S+   +S      + V MMMR  IGSRPP C R RCR C GHCEA+QVP     + Q +     ++SSS  S
Subjt:  NVSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAAEKVGMMMRNQIGSRPPSCRR-RCRECGGHCEAVQVPVALHDSHQNRRKRRRSSSSSHFS

Query:  ANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
        ++    +  +  D+++NYKP+SWKCKCGN I+NP
Subjt:  ANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP

Arabidopsis top hitse value%identityAlignment
AT3G22820.1 allergen-related1.3e-0430.3Show/hide
Query:  VSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAAEKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSHQNRRKRRRSSSSSHFSAN
        V  FLLF S S    +   + G G QG   + RS LP   + V        GS PP CR +C +C   C+AV VP+                        
Subjt:  VSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAAEKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSHQNRRKRRRSSSSSHFSAN

Query:  SKHDVALSSEDETSNYKPISWKCKCGNFIFNP
         +  + +  E     Y P +W+CKCGN +F P
Subjt:  SKHDVALSSEDETSNYKPISWKCKCGNFIFNP

AT4G37810.1 unknown protein7.7e-1843.28Show/hide
Query:  NVSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAAEKVGMMMRNQIGSRPPSCRR-RCRECGGHCEAVQVPVALHDSHQNRRKRRRSSSSSHFS
        N+S FLL L +    H + +A GR    S+   +S      + V MMMR  IGSRPP C R RCR C GHCEA+QVP     + Q +     ++SSS  S
Subjt:  NVSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAAEKVGMMMRNQIGSRPPSCRR-RCRECGGHCEAVQVPVALHDSHQNRRKRRRSSSSSHFS

Query:  ANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
        ++    +  +  D+++NYKP+SWKCKCGN I+NP
Subjt:  ANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP

AT5G10310.1 unknown protein8.0e-0733.33Show/hide
Query:  PVAAEKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSHQNRRKRRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP
        P++ +   +  + ++GS PPSC  RC  C   C A+QVP       ++R  R    S       S     L   D+ SNYKP+ WKC C    +NP
Subjt:  PVAAEKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSHQNRRKRRRSSSSSHFSANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGCCTTCAAAATTGGTACAGAATAAAAAATGTTTCAATTTTCTTGCTATTCCTCTCTGTTTCCATTCTCATTCATGTCACATCCATTGCTGAAGGCAGAGGAAT
TCAGGGGTCATTAATGGTGGGACGAAGCGAGTTGCCGGTGGCGGCGGAGAAAGTGGGGATGATGATGAGGAATCAAATAGGGTCAAGGCCACCAAGCTGTAGGAGAAGAT
GTAGAGAATGTGGAGGACATTGTGAAGCAGTTCAAGTACCAGTGGCATTACATGATTCACATCAGAATCGAAGAAAAAGAAGAAGAAGCAGCAGCAGCAGCCATTTCTCT
GCTAATTCAAAACATGATGTTGCTTTATCTAGTGAAGATGAGACCTCAAATTACAAGCCTATAAGCTGGAAATGCAAATGTGGGAACTTCATCTTCAACCCATGA
mRNA sequenceShow/hide mRNA sequence
AATTCTTTTCCCTTCCTTTCTCTTTTCTTATTTAAACACTTCTTCTTCTTCTTCTTCTTTCCATCCTTACCCATTTCCCCTTTTTTCTAAAATTTTTTCCTTTTTGTCTT
AGTCACTACTGAAAAAACTGAAAAGATGGGCAGCCTTCAAAATTGGTACAGAATAAAAAATGTTTCAATTTTCTTGCTATTCCTCTCTGTTTCCATTCTCATTCATGTCA
CATCCATTGCTGAAGGCAGAGGAATTCAGGGGTCATTAATGGTGGGACGAAGCGAGTTGCCGGTGGCGGCGGAGAAAGTGGGGATGATGATGAGGAATCAAATAGGGTCA
AGGCCACCAAGCTGTAGGAGAAGATGTAGAGAATGTGGAGGACATTGTGAAGCAGTTCAAGTACCAGTGGCATTACATGATTCACATCAGAATCGAAGAAAAAGAAGAAG
AAGCAGCAGCAGCAGCCATTTCTCTGCTAATTCAAAACATGATGTTGCTTTATCTAGTGAAGATGAGACCTCAAATTACAAGCCTATAAGCTGGAAATGCAAATGTGGGA
ACTTCATCTTCAACCCATGATTTTTTTTTTCTTCTTCTTTTCTTCAATTTTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MGSLQNWYRIKNVSIFLLFLSVSILIHVTSIAEGRGIQGSLMVGRSELPVAAEKVGMMMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDSHQNRRKRRRSSSSSHFS
ANSKHDVALSSEDETSNYKPISWKCKCGNFIFNP