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Lsi08G010670 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G010670
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:19263339..19267712
RNA-Seq ExpressionLsi08G010670
SyntenyLsi08G010670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAU02936.1 hypothetical protein VIGAN_11253300 [Vigna angularis var. angularis]3.9e-0440.22Show/hide
Query:  RNKLLKFCKENNPAGIKPIKLLLDKSKCSRLKRSEKLSGISPIKLDFVIHIYFNFFSFLK-SCGIGDGTSKVLYAMLKVSRLDKLPISAGNV
        RN + +F   N P GI P+K   D+S  S+      +SGISP KL   +   FN  + ++ SC + +G +  L    K SRLDKLPIS G V
Subjt:  RNKLLKFCKENNPAGIKPIKLLLDKSKCSRLKRSEKLSGISPIKLDFVIHIYFNFFSFLK-SCGIGDGTSKVLYAMLKVSRLDKLPISAGNV
TrEMBL top hitse value%identityAlignment
A0A0S3TCP1 Uncharacterized protein1.9e-0440.22Show/hide
Query:  RNKLLKFCKENNPAGIKPIKLLLDKSKCSRLKRSEKLSGISPIKLDFVIHIYFNFFSFLK-SCGIGDGTSKVLYAMLKVSRLDKLPISAGNV
        RN + +F   N P GI P+K   D+S  S+      +SGISP KL   +   FN  + ++ SC + +G +  L    K SRLDKLPIS G V
Subjt:  RNKLLKFCKENNPAGIKPIKLLLDKSKCSRLKRSEKLSGISPIKLDFVIHIYFNFFSFLK-SCGIGDGTSKVLYAMLKVSRLDKLPISAGNV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGTTGTGGAGATACCCCCTCTCCCCCTCTAGTTTGGCTGAAAAAAGAAAAATCAAACTATTCAAAACAGCGGCATTTTTGTTTTACGTAGAGGAGTGCCAAGG
AGGGGAACAGCATCATATTCAATGGCATGCTTTCTCGTATCACAAGCTTCTGGAGGGCTGCATTGGCGTAGAATATGCAGAACTTCCTTCATCGAAGGTCGTACTTCAGC
TCGGAAGGTCGAGTACACCGGTGGCGAGAAACAAGTTGCTTAAATTCTGCAAAGAGAACAACCCAGCAGGAATAAAGCCTATCAAGTTGTTACTCGATAAATCCAAGTGC
TCAAGGCTCAAAAGATCCGAAAAGCTTTCTGGGATTTCACCTATCAAATTGGATTTTGTCATCCACATATACTTCAACTTCTTCAGTTTCTTGAAATCTTGTGGTATTGG
CGATGGGACAAGCAAAGTGTTATACGCCATGCTCAAAGTTTCAAGATTGGACAAATTACCAATTTCAGCTGGCAATGTTACAGATGACAATTGGGAATCTCCCAGTGATA
TTCTTGTTCCTCAGAGAGATTCCAGTAACCGTGCCGTCTCTACAGATGATCTCAGGCCAATCACAGGGCGGGGACGAGGCGTTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGGTTGTGGAGATACCCCCTCTCCCCCTCTAGTTTGGCTGAAAAAAGAAAAATCAAACTATTCAAAACAGCGGCATTTTTGTTTTACGTAGAGGAGTGCCAAGG
AGGGGAACAGCATCATATTCAATGGCATGCTTTCTCGTATCACAAGCTTCTGGAGGGCTGCATTGGCGTAGAATATGCAGAACTTCCTTCATCGAAGGTCGTACTTCAGC
TCGGAAGGTCGAGTACACCGGTGGCGAGAAACAAGTTGCTTAAATTCTGCAAAGAGAACAACCCAGCAGGAATAAAGCCTATCAAGTTGTTACTCGATAAATCCAAGTGC
TCAAGGCTCAAAAGATCCGAAAAGCTTTCTGGGATTTCACCTATCAAATTGGATTTTGTCATCCACATATACTTCAACTTCTTCAGTTTCTTGAAATCTTGTGGTATTGG
CGATGGGACAAGCAAAGTGTTATACGCCATGCTCAAAGTTTCAAGATTGGACAAATTACCAATTTCAGCTGGCAATGTTACAGATGACAATTGGGAATCTCCCAGTGATA
TTCTTGTTCCTCAGAGAGATTCCAGTAACCGTGCCGTCTCTACAGATGATCTCAGGCCAATCACAGGGCGGGGACGAGGCGTTCCATAA
Protein sequenceShow/hide protein sequence
MGRLWRYPLSPSSLAEKRKIKLFKTAAFLFYVEECQGGEQHHIQWHAFSYHKLLEGCIGVEYAELPSSKVVLQLGRSSTPVARNKLLKFCKENNPAGIKPIKLLLDKSKC
SRLKRSEKLSGISPIKLDFVIHIYFNFFSFLKSCGIGDGTSKVLYAMLKVSRLDKLPISAGNVTDDNWESPSDILVPQRDSSNRAVSTDDLRPITGRGRGVP