CuGenDBv2

Gene ID	Lsi08G011120
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Chaperone protein dnaJ-like protein
Genome location	chr08:19763414..19764789
RNA-Seq Expression	Lsi08G011120
Synteny	Lsi08G011120
Gene Ontology terms	NA
InterPro domains	IPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6598797.1 hypothetical protein SDJN03_08575, partial [Cucurbita argyrosperma subsp. sororia]

8.7e-51

88.6

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Query:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC
        MATIAMTL  INLVRI PSRS SSR SFN  RCSSIQQVQV  DSTIACEPCNGKGWIVCDFCEGQKTNVKA+NNR+YRRCPSCRAVGYVLCSKCKVFKC
Subjt:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC

Query:  VTFPNYSDGAELSF
        VTFPNYSDG +LSF
Subjt:  VTFPNYSDGAELSF

XP_022962550.1 uncharacterized protein LOC111462947 [Cucurbita moschata]

7.9e-52

89.47

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Query:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC
        MATIAMTL KINLVRI PSRS+SSR SFN  RCSSIQQVQV  DSTIACEPCNGKGWIVCDFCEGQKTNVKA+NNR+YRRCPSCRAVGYVLCSKCKVFKC
Subjt:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC

Query:  VTFPNYSDGAELSF
        VTFPNYSDG +LSF
Subjt:  VTFPNYSDGAELSF

XP_022996808.1 uncharacterized protein LOC111491935 [Cucurbita maxima]

1.1e-50

88.6

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Query:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC
        MATIAMTL KINLVRI PS SSSSR S N  RCSSIQQVQV  DSTIACEPCNGKGWIVCDFCEGQKTNVKA+NNR+YRRCPSCRAVGYVLCSKCKVFKC
Subjt:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC

Query:  VTFPNYSDGAELSF
        VTFPNYSDG +LSF
Subjt:  VTFPNYSDGAELSF

XP_023545805.1 uncharacterized protein LOC111805130 [Cucurbita pepo subsp. pepo]

1.3e-49

85.96

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Query:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC
        MATIA+TL  INLVRI PSRS+SSR S N  RCSSIQQVQV  DSTIACEPCNGKGWIVCDFCEGQKTNVKA+NNR+YRRCPSCRAVGYVLCSKCKVFKC
Subjt:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC

Query:  VTFPNYSDGAELSF
        VTFPNY DG +LSF
Subjt:  VTFPNYSDGAELSF

XP_038885868.1 uncharacterized protein LOC120076171 [Benincasa hispida]

1.3e-51

90.35

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Query:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC
        MATIA+TL +INLVRI PS+ SSSR SFNS RCSSIQQVQV  DSTIACEPCNGKGWIVCDFCEGQKTNVKA+NNRIYRRCPSCRAVGYVLCSKCKVFKC
Subjt:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC

Query:  VTFPNYSDGAELSF
        VTFPNYSDGAELSF
Subjt:  VTFPNYSDGAELSF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPV4 Uncharacterized protein

4.8e-47

82.46

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Query:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC
        MATIA TL KINLVR  PSRSSS R SFN ARCS IQQVQ   DSTI CEPCNGKGWIVCDFCEGQKTNVK + NRIYRRCP+CRAVGYVLCS CKVFKC
Subjt:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC

Query:  VTFPNYSDGAELSF
        VTFPN++DGA+LSF
Subjt:  VTFPNYSDGAELSF

A0A1S3BBB6 uncharacterized protein LOC103488212 isoform X2

8.2e-47

84.68

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Query:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC
        MATIA TL KINLV   P RSSSSR SF+SARCS IQQVQV  DSTI CEPCNGKGWIVCDFCEGQKTNVKA+NNRIYRRCPSCRAVGYVLCSKCKVFKC
Subjt:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC

Query:  VTFPNYSDGAE
        VTFPN++DG +
Subjt:  VTFPNYSDGAE

A0A1S3BCN0 uncharacterized protein LOC103488212 isoform X1

5.2e-49

85.96

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Query:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC
        MATIA TL KINLV   P RSSSSR SF+SARCS IQQVQV  DSTI CEPCNGKGWIVCDFCEGQKTNVKA+NNRIYRRCPSCRAVGYVLCSKCKVFKC
Subjt:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC

Query:  VTFPNYSDGAELSF
        VTFPN++DGA+LSF
Subjt:  VTFPNYSDGAELSF

A0A6J1HFF6 uncharacterized protein LOC111462947

3.8e-52

89.47

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Query:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC
        MATIAMTL KINLVRI PSRS+SSR SFN  RCSSIQQVQV  DSTIACEPCNGKGWIVCDFCEGQKTNVKA+NNR+YRRCPSCRAVGYVLCSKCKVFKC
Subjt:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC

Query:  VTFPNYSDGAELSF
        VTFPNYSDG +LSF
Subjt:  VTFPNYSDGAELSF

A0A6J1K9Q6 uncharacterized protein LOC111491935

5.5e-51

88.6

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Query:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC
        MATIAMTL KINLVRI PS SSSSR S N  RCSSIQQVQV  DSTIACEPCNGKGWIVCDFCEGQKTNVKA+NNR+YRRCPSCRAVGYVLCSKCKVFKC
Subjt:  MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKC

Query:  VTFPNYSDGAELSF
        VTFPNYSDG +LSF
Subjt:  VTFPNYSDGAELSF

SwissProt top hits

e value

%identity

Alignment

P63967 Chaperone protein DnaJ 2

8.3e-04

29.03

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Query:  RIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGW------IVCDFCEGQKTNVKADNNRI-----YRRCPSCRAVGYVLCSKCK
        R+ P   S  R   +   C++    QV +D+ + C+ C GKG       I CD C G+        + +      R CP+CR VG V+   C+
Subjt:  RIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGW------IVCDFCEGQKTNVKADNNRI-----YRRCPSCRAVGYVLCSKCK

P9WNV6 Chaperone protein DnaJ 2

8.3e-04

29.03

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Query:  RIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGW------IVCDFCEGQKTNVKADNNRI-----YRRCPSCRAVGYVLCSKCK
        R+ P   S  R   +   C++    QV +D+ + C+ C GKG       I CD C G+        + +      R CP+CR VG V+   C+
Subjt:  RIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGW------IVCDFCEGQKTNVKADNNRI-----YRRCPSCRAVGYVLCSKCK

P9WNV7 Chaperone protein DnaJ 2

8.3e-04

29.03

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Query:  RIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGW------IVCDFCEGQKTNVKADNNRI-----YRRCPSCRAVGYVLCSKCK
        R+ P   S  R   +   C++    QV +D+ + C+ C GKG       I CD C G+        + +      R CP+CR VG V+   C+
Subjt:  RIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGW------IVCDFCEGQKTNVKADNNRI-----YRRCPSCRAVGYVLCSKCK

Arabidopsis top hits

e value

%identity

Alignment

AT2G24395.1 chaperone protein dnaJ-related

3.9e-33

59.26

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Query:  PSRSSSSRPS---FNSARCSSIQQVQVQLD--------STIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKCVTFPNY
        P+ S+S R     F   RC  +Q+ + QLD        + I CE CNGKGW++CDFC+GQKTNVK++NNRIYRRCP+C+AVG+VLC KCKVFKCVTFPN 
Subjt:  PSRSSSSRPS---FNSARCSSIQQVQVQLD--------STIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKCVTFPNY

Query:  SDGAELSF
         DG EL F
Subjt:  SDGAELSF

Sequences

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CDS sequence

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ATGGCGACGATCGCTATGACTCTTGCGAAGATCAACCTCGTCCGAATTCCTCCATCTCGATCCTCTTCCTCCAGACCTTCCTTCAATTCTGCGCGTTGCTCATCA
ATCCAGCAAGTCCAGGTACAACTTGATTCAACAATTGCTTGCGAACCTTGTAATGGTAAAGGATGGATAGTGTGTGATTTCTGTGAAGGGCAGAAGACTAATGTG
AAGGCCGATAACAATCGTATCTACCGACGCTGTCCGTCTTGCCGAGCTGTTGGATATGTTCTATGTTCAAAGTGCAAGGTTTTCAAGTGTGTTACTTTCCCAAAC
TACAGCGACGGTGCAGAACTATCCTTTTGA

mRNA sequence

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Protein sequence

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MATIAMTLAKINLVRIPPSRSSSSRPSFNSARCSSIQQVQVQLDSTIACEPCNGKGWIVCDFCEGQKTNVKADNNRIYRRCPSCRAVGYVLCSKCKVFKCVTFPN
YSDGAELSF

Lsi08G011120 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome