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Lsi08G011260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G011260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMethionyl-tRNA synthetase
Genome locationchr08:19893688..19895830
RNA-Seq ExpressionLsi08G011260
SyntenyLsi08G011260
Gene Ontology termsGO:0004812 - aminoacyl-tRNA ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029748.1 hypothetical protein SDJN02_08090, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-3366.07Show/hide
Query:  KNIKAHNFPDPRLFIQNPEKKTTNNS--RKKSLSQESKKNLKEEKNMCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKF
        K+ K+   P  R   QNP+KK+ +     ++SL  + K+  +    MCLVFVCDEDQRVLSRQPAPGACPFCGG+IQATD+ESQWRFCFLPLYWKTKRKF
Subjt:  KNIKAHNFPDPRLFIQNPEKKTTNNS--RKKSLSQESKKNLKEEKNMCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKF

Query:  YCTMCTRQLVMK
        YCTMCTRQLV++
Subjt:  YCTMCTRQLVMK

XP_004138769.1 uncharacterized protein LOC101206986 [Cucumis sativus]5.6e-3192.42Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK
        MCLVFVCDEDQRVLSRQPAPG CPFCGG+IQATD+ESQWRFCF+PLYWKTKRKFYCTMCTRQLVM+
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK

XP_008445081.1 PREDICTED: uncharacterized protein LOC103488227 [Cucumis melo]1.9e-3193.94Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK
        MCLVFVCDEDQRVLSRQPAPGACPFCGG+IQATD+ESQWRFCF+PLYWKTKRKFYCTMCTRQLVM+
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK

XP_022962063.1 uncharacterized protein LOC111462635 [Cucurbita moschata]2.5e-3193.94Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK
        MCLVFVCDEDQRVLSRQPAPGACPFCGG+IQATD+ESQWRFCFLPLYWKTKRKFYCTMCTRQLV++
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK

XP_038884125.1 uncharacterized protein LOC120075047 [Benincasa hispida]8.6e-3295.45Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK
        MCLVFVCDEDQRVLSRQPAPGACPFCGG+IQATD+ESQWRFCFLPLYWKTKRKFYCTMCTRQLVM+
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK

TrEMBL top hitse value%identityAlignment
A0A1S3BCK8 uncharacterized protein LOC1034882279.3e-3293.94Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK
        MCLVFVCDEDQRVLSRQPAPGACPFCGG+IQATD+ESQWRFCF+PLYWKTKRKFYCTMCTRQLVM+
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK

A0A6J1BVT7 uncharacterized protein LOC1110051731.1e-2781.82Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK
        MCLVFVCDE+QRVLSRQPAPGACPFCGG++QATDI++QW FCFLPLYWKTKRK YC++CTR+LV++
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK

A0A6J1HDM3 uncharacterized protein LOC1114626351.2e-3193.94Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK
        MCLVFVCDEDQRVLSRQPAPGACPFCGG+IQATD+ESQWRFCFLPLYWKTKRKFYCTMCTRQLV++
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK

A0A6J1KC13 uncharacterized protein LOC1114919251.2e-3193.94Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK
        MCLVFVCDEDQRVLSRQPAPGACPFCGG+IQATD+ESQWRFCFLPLYWKTKRKFYCTMCTRQLV++
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK

A0A6P3Z2S4 uncharacterized protein LOC1074058421.6e-2881.82Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK
        MCLVFVCDED+RV+SRQPAPGACP+CGG++QA D+ESQWRFCFLPLYWKTKRKFYC++CTR+LV++
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52855.1 unknown protein2.2e-0935.59Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMC
        +C  F+ D+ ++V   +PA G C  CG      D+++  RFCF+P+YW++ R   C+ C
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMC

AT4G29905.1 unknown protein2.9e-1755.38Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVM
        MCL  V  E++  L RQ APG CP+CGG + A DIE++W FCFLPL +K KRK+ C+ C R LV+
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVM

AT5G10695.1 unknown protein2.5e-2158.46Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVM
        MCLVFVCD+D+RV+ R  APGACP+CGG +Q  D+ SQWRFCF+PL  K+KR+  C+ C ++L++
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVM

AT5G10695.2 unknown protein3.3e-0535.38Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVM
        MCLVFVCD+D+RV+                         RFCF+PL  K+KR+  C+ C ++L++
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVM

AT5G57123.1 unknown protein3.1e-1955.38Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVM
        MCLV +CDE++  L RQ APG+CP+CGG +Q  D+E +W FCF+PL +K KRK+ C+ C R+LV+
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDIESQWRFCFLPLYWKTKRKFYCTMCTRQLVM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATTTTCGAGAATAAGTCAGAAACTTCTAGAGATACACGGTTCTCCATATCCCCTCAAATTCCACGAAACTTCCTTCTCTTTCTCTATAAAAACATCAAAGCTCA
CAACTTCCCTGATCCTAGACTTTTCATCCAAAACCCAGAAAAGAAAACAACAAACAACAGCAGAAAGAAATCCCTCAGCCAGGAAAGCAAGAAGAACCTAAAGGAAGAGA
AAAATATGTGTTTGGTATTTGTTTGCGATGAAGATCAGAGAGTATTATCAAGGCAACCAGCTCCAGGGGCATGCCCCTTCTGCGGAGGTATTATCCAAGCCACCGACATT
GAAAGCCAATGGAGGTTCTGTTTCCTCCCTCTTTACTGGAAAACCAAACGAAAGTTCTATTGCACTATGTGCACCAGACAACTCGTTATGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAATTTTCGAGAATAAGTCAGAAACTTCTAGAGATACACGGTTCTCCATATCCCCTCAAATTCCACGAAACTTCCTTCTCTTTCTCTATAAAAACATCAAAGCTCA
CAACTTCCCTGATCCTAGACTTTTCATCCAAAACCCAGAAAAGAAAACAACAAACAACAGCAGAAAGAAATCCCTCAGCCAGGAAAGCAAGAAGAACCTAAAGGAAGAGA
AAAATATGTGTTTGGTATTTGTTTGCGATGAAGATCAGAGAGTATTATCAAGGCAACCAGCTCCAGGGGCATGCCCCTTCTGCGGAGGTATTATCCAAGCCACCGACATT
GAAAGCCAATGGAGGTTCTGTTTCCTCCCTCTTTACTGGAAAACCAAACGAAAGTTCTATTGCACTATGTGCACCAGACAACTCGTTATGAAGTAG
Protein sequenceShow/hide protein sequence
MLIFENKSETSRDTRFSISPQIPRNFLLFLYKNIKAHNFPDPRLFIQNPEKKTTNNSRKKSLSQESKKNLKEEKNMCLVFVCDEDQRVLSRQPAPGACPFCGGIIQATDI
ESQWRFCFLPLYWKTKRKFYCTMCTRQLVMK