; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G011360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G011360
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionflowering-promoting factor 1-like
Genome locationchr08:19993018..19993754
RNA-Seq ExpressionLsi08G011360
SyntenyLsi08G011360
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0010228 - vegetative to reproductive phase transition of meristem (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652180.1 hypothetical protein Csa_021977 [Cucumis sativus]1.3e-5495.5Show/hide
Query:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRR-KVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRL+ENPQADSDGRLGNSRR KVLIHLPTGQPVTSYSSLE+ILTSLGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRR-KVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDM
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDM

XP_004138764.1 flowering-promoting factor 1 [Cucumis sativus]4.3e-5596.4Show/hide
Query:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRR-KVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRL+ENPQADSDGRLGNSRR KVLIHLPTGQPVTSYSSLE+ILTSLGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRR-KVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDM
        KNPNLFHVRDM
Subjt:  KNPNLFHVRDM

XP_022132061.1 flowering-promoting factor 1-like [Momordica charantia]5.1e-5694.55Show/hide
Query:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNG+IRL+ENPQADSDGRLGNSRRKVLIHLPTGQPV+SYSSLE+ILT+LGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDM
        NPNLFHVRDM
Subjt:  NPNLFHVRDM

XP_022950996.1 flowering-promoting factor 1-like protein 2 [Cucurbita moschata]4.8e-5493.64Show/hide
Query:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGVIRL+ENPQADSDGRLGNSRRKVLI+LPTGQ V+SYSSLE+ILTSLGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
Subjt:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDM
        NPNLFHVRD+
Subjt:  NPNLFHVRDM

XP_038886640.1 flowering-promoting factor 1-like protein 2 [Benincasa hispida]9.0e-5392.79Show/hide
Query:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRR-KVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRL+ENPQADSDGRLGNSRR KVLIHLPTGQ VTSY SLE+ILTSLGWERYYGGDP+LFQFHK SSIDLISLPRDFAKFNS+HMYDIVI
Subjt:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRR-KVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDM
        KNPNLFHVRDM
Subjt:  KNPNLFHVRDM

TrEMBL top hitse value%identityAlignment
A0A0A0LPY7 Uncharacterized protein2.1e-5596.4Show/hide
Query:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRR-KVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRL+ENPQADSDGRLGNSRR KVLIHLPTGQPVTSYSSLE+ILTSLGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRR-KVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDM
        KNPNLFHVRDM
Subjt:  KNPNLFHVRDM

A0A1S3BBE4 flowering-promoting factor 1-like2.1e-5596.4Show/hide
Query:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRR-KVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRL+ENPQADSDGRLGNSRR KVLIHLPTGQPVTSYSSLE+ILTSLGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRR-KVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDM
        KNPNLFHVRDM
Subjt:  KNPNLFHVRDM

A0A5A7VCS2 Flowering-promoting factor 12.1e-5596.4Show/hide
Query:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRR-KVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRL+ENPQADSDGRLGNSRR KVLIHLPTGQPVTSYSSLE+ILTSLGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRR-KVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDM
        KNPNLFHVRDM
Subjt:  KNPNLFHVRDM

A0A6J1BR67 flowering-promoting factor 1-like2.5e-5694.55Show/hide
Query:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNG+IRL+ENPQADSDGRLGNSRRKVLIHLPTGQPV+SYSSLE+ILT+LGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDM
        NPNLFHVRDM
Subjt:  NPNLFHVRDM

A0A6J1KTX8 flowering-promoting factor 1-like protein 22.3e-5493.64Show/hide
Query:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGVIRL+ENPQADSDGRLGNSRRKVLI+LPTGQ V+SYSSLE+ILTSLGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
Subjt:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDM
        NPNLFHVRD+
Subjt:  NPNLFHVRDM

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 14.3e-4275.68Show/hide
Query:  MSGVWVFKNGVIRLVENP-QADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIV
        MSGVWVFKNGVIRLVENP Q+ SD +   +RRKV+++LPTG+ V+SYS+LE IL SLGWERY+ GGD DL QFHKRSSIDLISLPRDF KFNS++MYDIV
Subjt:  MSGVWVFKNGVIRLVENP-QADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIV

Query:  IKNPNLFHVRD
        +KNPN FHVRD
Subjt:  IKNPNLFHVRD

O24340 Flowering-promoting factor 19.7e-4273.64Show/hide
Query:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRLVENP  +  G   NSRRKV+++LPTG+ ++SYS+LE IL SLGWERY+ GGD DL QFHKRSSIDLISLP+DF KF+S++MYDIV+
Subjt:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

Q5Q0B3 Flowering-promoting factor 1-like protein 15.9e-3966.13Show/hide
Query:  MSGVWVF-KNGVIRLVENPQADSDGRLGNS-----------RRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGD--PDLFQFHKRSSIDLISLPRDF
        MSGVWVF KNGV+RLVENP   S G    S           RRK+L+HLP+ + V+SY SLE IL +LGWERYY GD    L QFHKR+SIDLISLPRDF
Subjt:  MSGVWVF-KNGVIRLVENPQADSDGRLGNS-----------RRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGD--PDLFQFHKRSSIDLISLPRDF

Query:  AKFNSIHMYDIVIKNPNLFHVRDM
        +KFNSIHMYDIV+KNPN+FHVRDM
Subjt:  AKFNSIHMYDIVIKNPNLFHVRDM

Q9LGE3 Flowering-promoting factor 1-like protein 12.3e-3564.22Show/hide
Query:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGV+RLVE  QA +   +   RRK L+H P+GQ V+SY++LE  LT+LGWERYY  DP LFQFHKR S+DLISLP DF+ F+S+HMYDIV+K
Subjt:  MSGVWVFKNGVIRLVENPQADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRD
        N + F V D
Subjt:  NPNLFHVRD

Q9LXB5 Flowering-promoting factor 1-like protein 27.4e-4272.73Show/hide
Query:  MSGVWVFKNGVIRLVENP-QADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVF NGVIRLVENP Q+       + RR VL++LPTG+ V+SYSSLE IL SLGWERY+ GD DL Q+HKRSSIDLISLPRDF+KFNS++MYDIV+
Subjt:  MSGVWVFKNGVIRLVENP-QADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 14.2e-4066.13Show/hide
Query:  MSGVWVF-KNGVIRLVENPQADSDGRLGNS-----------RRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGD--PDLFQFHKRSSIDLISLPRDF
        MSGVWVF KNGV+RLVENP   S G    S           RRK+L+HLP+ + V+SY SLE IL +LGWERYY GD    L QFHKR+SIDLISLPRDF
Subjt:  MSGVWVF-KNGVIRLVENPQADSDGRLGNS-----------RRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGD--PDLFQFHKRSSIDLISLPRDF

Query:  AKFNSIHMYDIVIKNPNLFHVRDM
        +KFNSIHMYDIV+KNPN+FHVRDM
Subjt:  AKFNSIHMYDIVIKNPNLFHVRDM

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)5.3e-4372.73Show/hide
Query:  MSGVWVFKNGVIRLVENP-QADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVF NGVIRLVENP Q+       + RR VL++LPTG+ V+SYSSLE IL SLGWERY+ GD DL Q+HKRSSIDLISLPRDF+KFNS++MYDIV+
Subjt:  MSGVWVFKNGVIRLVENP-QADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

AT5G24860.1 flowering promoting factor 13.1e-4375.68Show/hide
Query:  MSGVWVFKNGVIRLVENP-QADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIV
        MSGVWVFKNGVIRLVENP Q+ SD +   +RRKV+++LPTG+ V+SYS+LE IL SLGWERY+ GGD DL QFHKRSSIDLISLPRDF KFNS++MYDIV
Subjt:  MSGVWVFKNGVIRLVENP-QADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIV

Query:  IKNPNLFHVRD
        +KNPN FHVRD
Subjt:  IKNPNLFHVRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGAGTTTGGGTTTTCAAGAATGGTGTAATTCGACTCGTCGAAAATCCTCAAGCAGATTCTGACGGAAGGCTAGGAAACTCGAGGCGAAAGGTATTGATACACTT
ACCGACAGGTCAACCTGTGACGTCCTACTCCTCGCTAGAGGATATCCTCACGTCATTGGGATGGGAGAGATACTATGGAGGCGATCCAGACCTGTTTCAGTTTCATAAAC
GTTCGTCCATTGACCTAATTTCTCTTCCAAGGGACTTTGCCAAGTTCAACTCCATTCACATGTACGACATAGTGATTAAAAATCCCAATCTCTTCCACGTCCGAGATATG
TGA
mRNA sequenceShow/hide mRNA sequence
AGAAAAAAAAAAACTTCAACTTAATTGTCACACAATGTCTGGAGTTTGGGTTTTCAAGAATGGTGTAATTCGACTCGTCGAAAATCCTCAAGCAGATTCTGACGGAAGGC
TAGGAAACTCGAGGCGAAAGGTATTGATACACTTACCGACAGGTCAACCTGTGACGTCCTACTCCTCGCTAGAGGATATCCTCACGTCATTGGGATGGGAGAGATACTAT
GGAGGCGATCCAGACCTGTTTCAGTTTCATAAACGTTCGTCCATTGACCTAATTTCTCTTCCAAGGGACTTTGCCAAGTTCAACTCCATTCACATGTACGACATAGTGAT
TAAAAATCCCAATCTCTTCCACGTCCGAGATATGTGAGTTTGGCAGCTTCAATTCATCTGATTTCCCCATCATCTCTCAGGTCTTATACACATAATATAATCTTCCCATT
TTTATCATCAATTCCTTCCGTCCTTGAATCTTGTAAGAAAATGCTGTTCCACTAGCTAGTTTTAGGTGTTTTTCCTCCATGGTTATCTTAAATATTTGTGTAGTTTCGTG
TGATGTGTGTTATGTATTATATAATAATTTCATAGGATTGATGTGTTTGTATCATATATATCAATAAAAGTATGGTATGTTTTTCCGCTTCAA
Protein sequenceShow/hide protein sequence
MSGVWVFKNGVIRLVENPQADSDGRLGNSRRKVLIHLPTGQPVTSYSSLEDILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIKNPNLFHVRDM