CuGenDBv2

Gene ID	Lsi08G011590
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr08:20247766..20249680
RNA-Seq Expression	Lsi08G011590
Synteny	Lsi08G011590
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0064965.1 uncharacterized protein E6C27_scaffold82G002860 [Cucumis melo var. makuwa]

5.7e-57

82.14

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Query:  MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENG-EWWQKRCVLGVAGVATALLMGGESGGVEMGNVN-FVD-SRKWSEERMCPQWRLNSLETIVPE
        MAMATTCC+NNL PPPRL Q  T STNN  +P N +G +WW+KRCVLGVAGV TAL+M GESGGVEMGNVN FVD SRKWSEERMCPQWRLNSLETIVPE
Subjt:  MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENG-EWWQKRCVLGVAGVATALLMGGESGGVEMGNVN-FVD-SRKWSEERMCPQWRLNSLETIVPE

Query:  NLPRPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM
        NLPRP+ RRRWDPAALPHTAPAPQLRTT+  SLSTRCFSM
Subjt:  NLPRPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM

KAG6598839.1 Pleiotropic drug resistance protein 1, partial [Cucurbita argyrosperma subsp. sororia]

4.5e-54

80.43

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Query:  MAMA-TTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENGEWWQKRCVLGVAGVATALLMGGESGGVEMGNVNFVDSRKWSEERMCPQWRLNSLETIVPENL
        MAM+ TTCCLNNL PPPRL  K TT T NQ +P N NGE WQKRCVLGV GVA AL M GESGGVEMG+VNFVDSRKWSEERMCPQWRLNSLETIVPENL
Subjt:  MAMA-TTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENGEWWQKRCVLGVAGVATALLMGGESGGVEMGNVNFVDSRKWSEERMCPQWRLNSLETIVPENL

Query:  PRPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM
        PRP+ RRRW+PAALP T  APQLRT HT+SLSTRCFS+
Subjt:  PRPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM

XP_008445145.1 PREDICTED: uncharacterized protein LOC103488267 [Cucumis melo]

8.9e-58

82.86

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Query:  MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENG-EWWQKRCVLGVAGVATALLMGGESGGVEMGNVN-FVD-SRKWSEERMCPQWRLNSLETIVPE
        MAMATTCC+NNL PPPRL Q  T STNN  +P N +G +WW+KRCVLGVAGV TAL+M GESGGVEMGNVN FVD SRKWSEERMCPQWRLNSLETIVPE
Subjt:  MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENG-EWWQKRCVLGVAGVATALLMGGESGGVEMGNVN-FVD-SRKWSEERMCPQWRLNSLETIVPE

Query:  NLPRPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM
        NLPRP+ RRRWDPAALPHTAPAPQLRTT+T SLSTRCFSM
Subjt:  NLPRPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM

XP_022997474.1 uncharacterized protein LOC111492380 [Cucurbita maxima]

1.1e-55

81.75

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Query:  MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENGEWWQKRCVLGVAGVATALLMGGESGGVEMGNVNFVDSRKWSEERMCPQWRLNSLETIVPENLP
        MAM+TTCCLNNL PPPRL  K TT T NQ +P N NGE WQKRCVLGV GVA AL M GESGGVEMG+VNFVDSRKWSEERMCPQWRLNSLETIVPENLP
Subjt:  MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENGEWWQKRCVLGVAGVATALLMGGESGGVEMGNVNFVDSRKWSEERMCPQWRLNSLETIVPENLP

Query:  RPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM
        RP+ RRRW+PAALP T  APQLRT HT+SLSTRCFSM
Subjt:  RPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM

XP_038884319.1 uncharacterized protein LOC120075190 [Benincasa hispida]

1.2e-65

88.32

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Query:  MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENGEWWQKRCVLGVAGVATALLMGGESGGVEMGNVNFVDSRKWSEERMCPQWRLNSLETIVPENLP
        M+MATTCCLNNL PPP+LPQ  TTS NNQ VPWN NGEWWQKR VL VAGVATAL+M GESGGVEMGNVN VDSRKWSEERMCPQWRLNSLET+VPENLP
Subjt:  MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENGEWWQKRCVLGVAGVATALLMGGESGGVEMGNVNFVDSRKWSEERMCPQWRLNSLETIVPENLP

Query:  RPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM
        RP+GRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFS+
Subjt:  RPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LLU6 Uncharacterized protein

1.5e-58

81.75

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Query:  MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENGEWWQKRCVLGVAGVATALLMGGESGGVEMGNVNFVDSRKWSEERMCPQWRLNSLETIVPENLP
        M MATTCCLNNL PPPRL Q  T STN   +P N NGEWW+KRCVLG AGV TAL+M GES GVEM N+NFVDSRKWSEERMCPQWRLNSLETIVPENLP
Subjt:  MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENGEWWQKRCVLGVAGVATALLMGGESGGVEMGNVNFVDSRKWSEERMCPQWRLNSLETIVPENLP

Query:  RPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM
        RP+ RRRWDPAALP T PAPQLRTT+TTSLSTRCFSM
Subjt:  RPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM

A0A1S3BBI5 uncharacterized protein LOC103488267

4.3e-58

82.86

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Query:  MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENG-EWWQKRCVLGVAGVATALLMGGESGGVEMGNVN-FVD-SRKWSEERMCPQWRLNSLETIVPE
        MAMATTCC+NNL PPPRL Q  T STNN  +P N +G +WW+KRCVLGVAGV TAL+M GESGGVEMGNVN FVD SRKWSEERMCPQWRLNSLETIVPE
Subjt:  MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENG-EWWQKRCVLGVAGVATALLMGGESGGVEMGNVN-FVD-SRKWSEERMCPQWRLNSLETIVPE

Query:  NLPRPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM
        NLPRP+ RRRWDPAALPHTAPAPQLRTT+T SLSTRCFSM
Subjt:  NLPRPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM

A0A5A7VGF0 Uncharacterized protein

2.8e-57

82.14

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Query:  MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENG-EWWQKRCVLGVAGVATALLMGGESGGVEMGNVN-FVD-SRKWSEERMCPQWRLNSLETIVPE
        MAMATTCC+NNL PPPRL Q  T STNN  +P N +G +WW+KRCVLGVAGV TAL+M GESGGVEMGNVN FVD SRKWSEERMCPQWRLNSLETIVPE
Subjt:  MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENG-EWWQKRCVLGVAGVATALLMGGESGGVEMGNVN-FVD-SRKWSEERMCPQWRLNSLETIVPE

Query:  NLPRPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM
        NLPRP+ RRRWDPAALPHTAPAPQLRTT+  SLSTRCFSM
Subjt:  NLPRPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM

A0A6J1EPL8 uncharacterized protein LOC111436227

2.9e-54

80.43

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Query:  MAMA-TTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENGEWWQKRCVLGVAGVATALLMGGESGGVEMGNVNFVDSRKWSEERMCPQWRLNSLETIVPENL
        MAM+ TTCCLNNL PPPRL  K TT T NQ +P N NGE WQKRCVLGV GVA AL M GESGGVEMG+VNFVDSRKWSEERMCPQWRLNSLETIVPENL
Subjt:  MAMA-TTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENGEWWQKRCVLGVAGVATALLMGGESGGVEMGNVNFVDSRKWSEERMCPQWRLNSLETIVPENL

Query:  PRPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM
        PRP+ RRRW+PAALP T  APQLRT HT+SLSTRCFS+
Subjt:  PRPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM

A0A6J1KBE7 uncharacterized protein LOC111492380

5.2e-56

81.75

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Query:  MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENGEWWQKRCVLGVAGVATALLMGGESGGVEMGNVNFVDSRKWSEERMCPQWRLNSLETIVPENLP
        MAM+TTCCLNNL PPPRL  K TT T NQ +P N NGE WQKRCVLGV GVA AL M GESGGVEMG+VNFVDSRKWSEERMCPQWRLNSLETIVPENLP
Subjt:  MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENGEWWQKRCVLGVAGVATALLMGGESGGVEMGNVNFVDSRKWSEERMCPQWRLNSLETIVPENLP

Query:  RPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM
        RP+ RRRW+PAALP T  APQLRT HT+SLSTRCFSM
Subjt:  RPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G25625.1 unknown protein

1.2e-09

35.06

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Query:  MAMATTCCLNNLTPPPRLPQKPTTS----TNNQFVPWNENGEWWQKRCVLGVAGVATALLMGG-------------ESGGVEMGNVNFVDSRKWSEERMC
        MA   +CCL NL P      +   S    T+       EN    +K     V GVA  +++GG                 VE      V  R+WS++R C
Subjt:  MAMATTCCLNNLTPPPRLPQKPTTS----TNNQFVPWNENGEWWQKRCVLGVAGVATALLMGG-------------ESGGVEMGNVNFVDSRKWSEERMC

Query:  PQWRLNSLETIVPENLPRPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM
        P W  NSLETIVPENLPRPS  RR + A L     AP +    T      CFS+
Subjt:  PQWRLNSLETIVPENLPRPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM

AT2G25625.2 unknown protein

4.3e-10

35.29

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Query:  MAMATTCCLNNLTPPPRLPQKPTTS---TNNQFVPWNENGEWWQKRCVLGVAGVATALLMGG-------------ESGGVEMGNVNFVDSRKWSEERMCP
        MA   +CCL NL P      +   S   T ++     EN    +K     V GVA  +++GG                 VE      V  R+WS++R CP
Subjt:  MAMATTCCLNNLTPPPRLPQKPTTS---TNNQFVPWNENGEWWQKRCVLGVAGVATALLMGG-------------ESGGVEMGNVNFVDSRKWSEERMCP

Query:  QWRLNSLETIVPENLPRPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM
         W  NSLETIVPENLPRPS  RR + A L     AP +    T      CFS+
Subjt:  QWRLNSLETIVPENLPRPSGRRRWDPAALPHTAPAPQLRTTHTTSLSTRCFSM

Sequences

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CDS sequence

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ATGGCTATGGCCACCACCTGCTGCCTGAACAACCTCACTCCACCGCCGCGGTTGCCCCAAAAGCCCACCACATCCACCAACAACCAATTTGTTCCATGGAATGAAAATGG
AGAATGGTGGCAAAAGCGGTGCGTTTTGGGAGTGGCCGGAGTTGCGACGGCGCTGCTAATGGGCGGAGAAAGTGGTGGCGTAGAAATGGGAAATGTTAATTTTGTTGATT
CCAGAAAATGGAGCGAAGAAAGAATGTGCCCACAGTGGCGGCTCAATTCCCTCGAAACCATCGTGCCGGAGAATCTTCCGAGGCCGTCCGGCCGCCGGAGATGGGACCCC
GCCGCCCTTCCTCACACGGCGCCGGCGCCTCAACTCCGAACCACACATACAACTTCCCTTTCTACTCGCTGCTTCTCCATGTAA

mRNA sequence

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AAAAAAAAAAAATCTTAGAAATTTTAAAATTTTAAAAGAGGTAGGCTCAATAATCAAAACACGATTGAATTTCTCTTACTTAAAATTGTCAACCAAAGATTGTTCCAATC
AAAGTAAAATTTCTAACCCACTTTTTGGTGTTCCAAACTTGCTGGACTTCCCTTTGCCGTCGTTCTCAACTACCGTGGGCAGACCAACAACCTCCGACGCCGCTGCCGCC
TCCTTCTTCTTCTTTTTAACTTCTCCAAATCCCATCTCTCTCTCCCCAAAAATCTACAGTTTCATTGAAACACAGAGAAATCCATCAAAATTGGCTATGGCTATGGCCAC
CACCTGCTGCCTGAACAACCTCACTCCACCGCCGCGGTTGCCCCAAAAGCCCACCACATCCACCAACAACCAATTTGTTCCATGGAATGAAAATGGAGAATGGTGGCAAA
AGCGGTGCGTTTTGGGAGTGGCCGGAGTTGCGACGGCGCTGCTAATGGGCGGAGAAAGTGGTGGCGTAGAAATGGGAAATGTTAATTTTGTTGATTCCAGAAAATGGAGC
GAAGAAAGAATGTGCCCACAGTGGCGGCTCAATTCCCTCGAAACCATCGTGCCGGAGAATCTTCCGAGGCCGTCCGGCCGCCGGAGATGGGACCCCGCCGCCCTTCCTCA
CACGGCGCCGGCGCCTCAACTCCGAACCACACATACAACTTCCCTTTCTACTCGCTGCTTCTCCATGTAAATAACCAATTTACCAACACAATTTACCATTTTTTCAAATA
CCATTTTACAATAATTACATTGCAATAAACAACCATTAATGTTATTTAAATCCCACACTGTCAAATTGAGTATGGCTCAGTATTAAATTGAACATATACTTCTTTGATTT
TATTTAAAATCAAATATTCAAATTGTAAAACTCTTAATTTTGTTGTACTGTTGTCTGTGTTGATCTCTATATTTTTAGAAATGGGCAATTGTATTATAAAGGTGTAAAGA
CCCAAATAAACACTTTAAACATTTTAGTTGTACCAGAATTAAAATAAACAAAAGTTAAAAATACAAAAACTAAAATGGAAAGCACATAGGATCAATCCAAAATTTTCCTT
ACAAATTCAAATGTGGAAATTTTTAATGTTTAATTTATA

Protein sequence

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MAMATTCCLNNLTPPPRLPQKPTTSTNNQFVPWNENGEWWQKRCVLGVAGVATALLMGGESGGVEMGNVNFVDSRKWSEERMCPQWRLNSLETIVPENLPRPSGRRRWDP
AALPHTAPAPQLRTTHTTSLSTRCFSM

Lsi08G011590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome