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Lsi08G012280 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G012280
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionStress induced protein
Genome locationchr08:20735277..20735738
RNA-Seq ExpressionLsi08G012280
SyntenyLsi08G012280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598556.1 hypothetical protein SDJN03_08334, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4961.66Show/hide
Query:  MASSSSAINGTLRSEEIRGTDRIEEGDDH------DEVGVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVKQSWMMKKVKRLNEIIKAMAGRK
        MASSS+  +   RSEEIR  DRIEEG+D       DEVGVSYSSCGCFFGFGSRL+RS SVRC YL L   R+ EEVKQSWMMKKVKR  +IIKAMAGRK
Subjt:  MASSSSAINGTLRSEEIRGTDRIEEGDDH------DEVGVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVKQSWMMKKVKRLNEIIKAMAGRK

Query:  WRSLINGIMNKRRSVRFQYDPRSYALNFDEGIREE----------------------------------GRHVLRPPSASPIGLGIGMNRTQI
        WRS INGI+NKRRSVRFQYDPRSYALNFDEGI EE                                  GRH  R P ASPIGLG GMN +Q+
Subjt:  WRSLINGIMNKRRSVRFQYDPRSYALNFDEGIREE----------------------------------GRHVLRPPSASPIGLGIGMNRTQI

KAG7029494.1 hypothetical protein SDJN02_07833, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-5373.62Show/hide
Query:  MASSSSAINGTLRSEEIRGTDRIEEGDDH------DEVGVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVKQSWMMKKVKRLNEIIKAMAGRK
        MASSS+  +   RSEEIR  DRIEEG+D       DEVGVSYSSCGCFFGFGSRL+RS SVRC YL L   R+ EEVKQSWMMKKVKR  +IIKAMAGRK
Subjt:  MASSSSAINGTLRSEEIRGTDRIEEGDDH------DEVGVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVKQSWMMKKVKRLNEIIKAMAGRK

Query:  WRSLINGIMNKRRSVRFQYDPRSYALNFDEGIREE----GRHVLRPPSASPIGLGIGMNRTQI
        WRS INGI+NKRRSVRFQYDPRSYALNFDEGI EE    GRH  R P ASPIGLG GMN +QI
Subjt:  WRSLINGIMNKRRSVRFQYDPRSYALNFDEGIREE----GRHVLRPPSASPIGLGIGMNRTQI

XP_008445245.1 PREDICTED: uncharacterized protein LOC103488331 [Cucumis melo]3.1e-5176.92Show/hide
Query:  ASSSSAINGTLRSEEIRGTDRIEEGDD--HDEV-GVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVK-QSWMMKKVKRLNEIIKAMAGRKWRS
        +SSSSAI+GTLRSE+    DRIEEG+D   +EV G SYSSCGCFFGFGSRL+R   VR GYLPLQ +RK EEVK QSWMM+KVKRLNEIIKAMAGRKWRS
Subjt:  ASSSSAINGTLRSEEIRGTDRIEEGDD--HDEV-GVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVK-QSWMMKKVKRLNEIIKAMAGRKWRS

Query:  LINGIMNKRRSVRFQYDPRSYALNFDEGIREEGRHVLRPPSASPIGLGIGMNRTQI
        LINGI+NKRRSVRFQYDPRSYALNFDEG+ EEGR      S  PIGLGIGMNR QI
Subjt:  LINGIMNKRRSVRFQYDPRSYALNFDEGIREEGRHVLRPPSASPIGLGIGMNRTQI

XP_011649836.1 uncharacterized protein LOC105434671 [Cucumis sativus]1.1e-4874.19Show/hide
Query:  ASSSSAINGTLRSEEIRGTDRIEEGDD-HDEVGVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVK--QSWMMKKVKRLNEIIKAMAGRKWRSL
        +SSSS I+GTLRS         EEG+D  D+VGVSYSSCGCFFGF SRL+R   VR GYLPLQ +RK EEVK  QSWMM KVKRLNEIIKA+AGRKWRSL
Subjt:  ASSSSAINGTLRSEEIRGTDRIEEGDD-HDEVGVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVK--QSWMMKKVKRLNEIIKAMAGRKWRSL

Query:  INGIMNKRRSVRFQYDPRSYALNFDEGIREEGRHVLRPPSASPIGLGIGMNRTQI
        INGI+NKRRSVRFQYDPRSYALNFDEGI EE RH L      PIGLGIGMNR QI
Subjt:  INGIMNKRRSVRFQYDPRSYALNFDEGIREEGRHVLRPPSASPIGLGIGMNRTQI

XP_022997532.1 uncharacterized protein LOC111492425 [Cucurbita maxima]8.4e-4973.51Show/hide
Query:  MASSSSAINGTLRSEEIRGTDRIEEGDDH----DEVGVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVKQSWMMKKVKRLNEIIKAMAGRKWR
        MASS++  +   RSEEIR  DRIEEG+D     DEVGVSYSSCGCFFGFGSRL+RS SVRC YL L   R+ EEVKQSWMMKKVKR  +IIKAMAGRKWR
Subjt:  MASSSSAINGTLRSEEIRGTDRIEEGDDH----DEVGVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVKQSWMMKKVKRLNEIIKAMAGRKWR

Query:  SLINGIMNKRRSVRFQYDPRSYALNFDEGIREE----GRHVLRPPSASPIG
        S INGI+NKRRSVRFQYDPRSYALNFDEG+ EE    GRH  R P ASPIG
Subjt:  SLINGIMNKRRSVRFQYDPRSYALNFDEGIREE----GRHVLRPPSASPIG

TrEMBL top hitse value%identityAlignment
A0A0A0LPP6 Uncharacterized protein5.3e-4974.19Show/hide
Query:  ASSSSAINGTLRSEEIRGTDRIEEGDD-HDEVGVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVK--QSWMMKKVKRLNEIIKAMAGRKWRSL
        +SSSS I+GTLRS         EEG+D  D+VGVSYSSCGCFFGF SRL+R   VR GYLPLQ +RK EEVK  QSWMM KVKRLNEIIKA+AGRKWRSL
Subjt:  ASSSSAINGTLRSEEIRGTDRIEEGDD-HDEVGVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVK--QSWMMKKVKRLNEIIKAMAGRKWRSL

Query:  INGIMNKRRSVRFQYDPRSYALNFDEGIREEGRHVLRPPSASPIGLGIGMNRTQI
        INGI+NKRRSVRFQYDPRSYALNFDEGI EE RH L      PIGLGIGMNR QI
Subjt:  INGIMNKRRSVRFQYDPRSYALNFDEGIREEGRHVLRPPSASPIGLGIGMNRTQI

A0A1S3BC68 uncharacterized protein LOC1034883311.5e-5176.92Show/hide
Query:  ASSSSAINGTLRSEEIRGTDRIEEGDD--HDEV-GVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVK-QSWMMKKVKRLNEIIKAMAGRKWRS
        +SSSSAI+GTLRSE+    DRIEEG+D   +EV G SYSSCGCFFGFGSRL+R   VR GYLPLQ +RK EEVK QSWMM+KVKRLNEIIKAMAGRKWRS
Subjt:  ASSSSAINGTLRSEEIRGTDRIEEGDD--HDEV-GVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVK-QSWMMKKVKRLNEIIKAMAGRKWRS

Query:  LINGIMNKRRSVRFQYDPRSYALNFDEGIREEGRHVLRPPSASPIGLGIGMNRTQI
        LINGI+NKRRSVRFQYDPRSYALNFDEG+ EEGR      S  PIGLGIGMNR QI
Subjt:  LINGIMNKRRSVRFQYDPRSYALNFDEGIREEGRHVLRPPSASPIGLGIGMNRTQI

A0A5A7VG87 Stress induced protein1.5e-5176.92Show/hide
Query:  ASSSSAINGTLRSEEIRGTDRIEEGDD--HDEV-GVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVK-QSWMMKKVKRLNEIIKAMAGRKWRS
        +SSSSAI+GTLRSE+    DRIEEG+D   +EV G SYSSCGCFFGFGSRL+R   VR GYLPLQ +RK EEVK QSWMM+KVKRLNEIIKAMAGRKWRS
Subjt:  ASSSSAINGTLRSEEIRGTDRIEEGDD--HDEV-GVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVK-QSWMMKKVKRLNEIIKAMAGRKWRS

Query:  LINGIMNKRRSVRFQYDPRSYALNFDEGIREEGRHVLRPPSASPIGLGIGMNRTQI
        LINGI+NKRRSVRFQYDPRSYALNFDEG+ EEGR      S  PIGLGIGMNR QI
Subjt:  LINGIMNKRRSVRFQYDPRSYALNFDEGIREEGRHVLRPPSASPIGLGIGMNRTQI

A0A6J1BV09 uncharacterized protein LOC1110049726.9e-4970.44Show/hide
Query:  MASSSSAINGTLRSEEIRGTDRIEEGDDHDEVGV-SYSSCGCFFGFGSRLTRSG-SVRCGYLPLQPHRKEEEVKQSWMMKKVKRLNEIIKAMAGRKWRSL
        MAS SS+ + +   E +R TDRIEE DD  EVGV SYSSCGCFFGFGSR  RS   VRC YLPLQPH  E++VKQSWMMKKVKR  EIIKA+AGRKWRS 
Subjt:  MASSSSAINGTLRSEEIRGTDRIEEGDDHDEVGV-SYSSCGCFFGFGSRLTRSG-SVRCGYLPLQPHRKEEEVKQSWMMKKVKRLNEIIKAMAGRKWRSL

Query:  INGIMNKRRSVRFQYDPRSYALNFDEGIREE----GRHVLRPPSASPIGLGIGMNRTQI
        I+GI++K+RSVRFQYDPRSYALNFDEG  E+    GRH  R PSA+PIGLGIGMNR+Q+
Subjt:  INGIMNKRRSVRFQYDPRSYALNFDEGIREE----GRHVLRPPSASPIGLGIGMNRTQI

A0A6J1K5B0 uncharacterized protein LOC1114924254.1e-4973.51Show/hide
Query:  MASSSSAINGTLRSEEIRGTDRIEEGDDH----DEVGVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVKQSWMMKKVKRLNEIIKAMAGRKWR
        MASS++  +   RSEEIR  DRIEEG+D     DEVGVSYSSCGCFFGFGSRL+RS SVRC YL L   R+ EEVKQSWMMKKVKR  +IIKAMAGRKWR
Subjt:  MASSSSAINGTLRSEEIRGTDRIEEGDDH----DEVGVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVKQSWMMKKVKRLNEIIKAMAGRKWR

Query:  SLINGIMNKRRSVRFQYDPRSYALNFDEGIREE----GRHVLRPPSASPIG
        S INGI+NKRRSVRFQYDPRSYALNFDEG+ EE    GRH  R P ASPIG
Subjt:  SLINGIMNKRRSVRFQYDPRSYALNFDEGIREE----GRHVLRPPSASPIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G25240.1 unknown protein1.0e-0734.55Show/hide
Query:  TDRIEEGDDHDEVGVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVKQSWMMKKVKRLNEIIKAMAGRKW----RSLINGIMNKRRSVRFQYDP
        TDR     D  E   ++  CG F  F     R G              +EE + +W  +K+K L EI + +AG KW    RS  +G    RR V F YD 
Subjt:  TDRIEEGDDHDEVGVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVKQSWMMKKVKRLNEIIKAMAGRKW----RSLINGIMNKRRSVRFQYDP

Query:  RSYALNFDEG
        ++Y+LNFD+G
Subjt:  RSYALNFDEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCTTCTTCCGCCATTAATGGAACCTTGCGATCGGAGGAGATCAGAGGGACTGATCGGATCGAGGAAGGAGATGATCATGATGAAGTAGGAGTTTCGTATTC
TTCCTGTGGATGTTTCTTTGGATTCGGATCGAGATTGACTCGGAGCGGCAGTGTTCGATGCGGATATCTACCTCTGCAACCGCATCGGAAAGAGGAAGAAGTGAAGCAGA
GTTGGATGATGAAGAAGGTGAAGAGATTGAACGAGATTATAAAAGCTATGGCAGGGCGGAAATGGAGAAGTTTGATTAATGGAATAATGAACAAGAGACGGAGTGTGAGG
TTTCAGTACGATCCGAGGAGTTACGCTCTGAATTTTGACGAAGGGATCAGGGAAGAAGGACGTCATGTTCTCCGGCCGCCGTCTGCATCTCCGATCGGATTGGGGATTGG
AATGAACAGAACCCAAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTCTTCTTCCGCCATTAATGGAACCTTGCGATCGGAGGAGATCAGAGGGACTGATCGGATCGAGGAAGGAGATGATCATGATGAAGTAGGAGTTTCGTATTC
TTCCTGTGGATGTTTCTTTGGATTCGGATCGAGATTGACTCGGAGCGGCAGTGTTCGATGCGGATATCTACCTCTGCAACCGCATCGGAAAGAGGAAGAAGTGAAGCAGA
GTTGGATGATGAAGAAGGTGAAGAGATTGAACGAGATTATAAAAGCTATGGCAGGGCGGAAATGGAGAAGTTTGATTAATGGAATAATGAACAAGAGACGGAGTGTGAGG
TTTCAGTACGATCCGAGGAGTTACGCTCTGAATTTTGACGAAGGGATCAGGGAAGAAGGACGTCATGTTCTCCGGCCGCCGTCTGCATCTCCGATCGGATTGGGGATTGG
AATGAACAGAACCCAAATATGA
Protein sequenceShow/hide protein sequence
MASSSSAINGTLRSEEIRGTDRIEEGDDHDEVGVSYSSCGCFFGFGSRLTRSGSVRCGYLPLQPHRKEEEVKQSWMMKKVKRLNEIIKAMAGRKWRSLINGIMNKRRSVR
FQYDPRSYALNFDEGIREEGRHVLRPPSASPIGLGIGMNRTQI