CuGenDBv2

Gene ID	Lsi08G012300
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr08:20755940..20758091
RNA-Seq Expression	Lsi08G012300
Synteny	Lsi08G012300
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0064903.1 uncharacterized protein E6C27_scaffold82G002200 [Cucumis melo var. makuwa]

2.6e-58

82.17

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Query:  MRLVLAKSSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQ
        MRLV AKSSNKGCG NEFSSSTAMAKRLKRRKALADLRVEESLLLKER     ELESLHATFKEQTTNNEKLKKMKLN+NFN S D L + SKPVA +QQ
Subjt:  MRLVLAKSSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQ

Query:  CQSVDPTTDNVPATSAIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL
        CQ  DPTT++VPAT  IQTVPGNS+QSE +  +EINSMESGGFFLPDLNMIPAEDCL
Subjt:  CQSVDPTTDNVPATSAIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL

KAG7029492.1 hypothetical protein SDJN02_07831 [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-47

76.87

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Query:  GCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDPTTDNV
        GCG+NEFS STAMAKR KRRKALADLRVEES+LLKER     EL+SLHATFKEQTTNN+KLKK+KLNLN +ASSD + +ESKPVA SQ C+ VDPT DN+
Subjt:  GCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDPTTDNV

Query:  -PATSAIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL
         PATS IQTVPG      L ETQE NSMESGGFFLPDLNMIPAEDCL
Subjt:  -PATSAIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL

XP_004138712.1 uncharacterized protein LOC101213579 [Cucumis sativus]

7.3e-53

80.13

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Query:  SSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDPT
        S +KGCG NEFSSSTAMAKRLKRRKALADLRVEESLLLKER     ELESLHATFKEQTTNNEKLKKMKLN+NFN SSD L + SKPVA +QQCQ  DPT
Subjt:  SSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDPT

Query:  TDNVPATSAIQTVPGNSTQSELHETQEINSMES-GGFFLPDLNMIPAEDCL
        T++VPAT  +QT PGNS+QSE +  QEINSMES GGFFLPDLNMIPAEDCL
Subjt:  TDNVPATSAIQTVPGNSTQSELHETQEINSMES-GGFFLPDLNMIPAEDCL

XP_038886620.1 uncharacterized protein LOC120076783 isoform X1 [Benincasa hispida]

1.0e-62

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Query:  SSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDPT
        S +KGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER     ELESLHATFKEQTTNNEKLKKMKLNLNFNASSD L +ESKPVAP+QQCQSVDPT
Subjt:  SSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDPT

Query:  TDNVPATSAIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL
        TDNVPATS I TVPGN TQSELHET+EINSMESGGFFLPDLNMIPAEDCL
Subjt:  TDNVPATSAIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL

XP_038886622.1 uncharacterized protein LOC120076783 isoform X2 [Benincasa hispida]

1.4e-67

91.72

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Query:  MRLVLAKSSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQ
        MRLVLAKSSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER     ELESLHATFKEQTTNNEKLKKMKLNLNFNASSD L +ESKPVAP+QQ
Subjt:  MRLVLAKSSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQ

Query:  CQSVDPTTDNVPATSAIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL
        CQSVDPTTDNVPATS I TVPGN TQSELHET+EINSMESGGFFLPDLNMIPAEDCL
Subjt:  CQSVDPTTDNVPATSAIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQC4 Uncharacterized protein

3.5e-53

80.13

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Query:  SSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDPT
        S +KGCG NEFSSSTAMAKRLKRRKALADLRVEESLLLKER     ELESLHATFKEQTTNNEKLKKMKLN+NFN SSD L + SKPVA +QQCQ  DPT
Subjt:  SSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDPT

Query:  TDNVPATSAIQTVPGNSTQSELHETQEINSMES-GGFFLPDLNMIPAEDCL
        T++VPAT  +QT PGNS+QSE +  QEINSMES GGFFLPDLNMIPAEDCL
Subjt:  TDNVPATSAIQTVPGNSTQSELHETQEINSMES-GGFFLPDLNMIPAEDCL

A0A5A7V9R4 Uncharacterized protein

1.3e-58

82.17

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Query:  MRLVLAKSSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQ
        MRLV AKSSNKGCG NEFSSSTAMAKRLKRRKALADLRVEESLLLKER     ELESLHATFKEQTTNNEKLKKMKLN+NFN S D L + SKPVA +QQ
Subjt:  MRLVLAKSSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQ

Query:  CQSVDPTTDNVPATSAIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL
        CQ  DPTT++VPAT  IQTVPGNS+QSE +  +EINSMESGGFFLPDLNMIPAEDCL
Subjt:  CQSVDPTTDNVPATSAIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL

A0A6J1BQL2 uncharacterized protein LOC111004554

1.6e-45

72.85

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Query:  SSNKGCG-TNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDP
        S +KG G T+EFS STAMAKRLKRRKALADLRVEESLLLKER     EL SLHATFKEQTTNNEKLKKMKLNLNFNASSD + +ESK    +Q CQS+DP
Subjt:  SSNKGCG-TNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDP

Query:  TTDNVPATSAIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL
        T + +P TS IQ V GNS QS   +  EIN +E GGFFLPDLNMIPAEDCL
Subjt:  TTDNVPATSAIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL

A0A6J1HCA4 uncharacterized protein LOC111462771

9.9e-48

75.5

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Query:  SSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDPT
        S +KGCG+NEFS STAMAKR KRRKALADLRVEES+LLKER     EL+SLHATFKEQTTNN+ LKK+KLNLN +ASSD + +ESKPVA +Q C+ VDPT
Subjt:  SSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDPT

Query:  TDNV-PATSAIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL
         DNV PATS IQTVPG      L ETQE NSMESGGFFLPDLNMIPAEDCL
Subjt:  TDNV-PATSAIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL

A0A6J1KBK0 uncharacterized protein LOC111491811

1.7e-47

74.17

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Query:  SSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDPT
        S +KG G+NEFS STAMAKR KRRKALADLRVEES+LLKER     EL+SLHATFKEQTTNN+KLKK+KLNLN +ASSD +W+E KPVA +Q C+  DPT
Subjt:  SSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDPT

Query:  TDNV-PATSAIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL
         DN+ PATS IQTVPG      L ETQE NSMESGGFFLPDLNMIPAEDCL
Subjt:  TDNV-PATSAIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G32030.1 unknown protein

6.9e-09

35.57

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Query:  SSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDPT
        S +K   TNE +S    +KRLK+RK+  +L+ EE+L LKER     E+ SL ATF EQ   N+KLK++KL+LN    ++      KPV            
Subjt:  SSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKER-----ELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDPT

Query:  TDNVPATSAIQTVPGNSTQSELHETQEINSMESGGFF-LPDLNMIPAED
          ++   S ++ + G+ +       +  +S   G FF LPDLNM P+E+
Subjt:  TDNVPATSAIQTVPGNSTQSELHETQEINSMESGGFF-LPDLNMIPAED

Sequences

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CDS sequence

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mRNA sequence

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ATGCGTTTGGTTTTAGCAAAGTCATCGAACAAAGGTTGTGGTACTAATGAATTCAGTTCTAGCACTGCCATGGCAAAGAGGTTAAAAAGAAGAAAGGCATTGGCTGATCT
GAGAGTGGAGGAGTCTTTACTTTTGAAGGAAAGGGAGCTGGAAAGTTTACATGCGACGTTCAAGGAACAGACGACTAACAATGAGAAGTTGAAGAAAATGAAGCTCAATC
TGAATTTCAATGCATCATCAGATTGTCTTTGGGAGGAGTCGAAGCCAGTCGCTCCCAGTCAACAGTGCCAAAGCGTGGATCCTACAACCGATAACGTTCCTGCAACTTCG
GCGATACAAACCGTACCTGGAAACAGTACACAATCAGAATTGCACGAGACACAGGAGATAAATTCAATGGAAAGTGGTGGTTTCTTTTTACCAGATCTTAATATGATCCC
AGCTGAGGACTGTCTCTGAAGCTCTCATCAATCATGAGCTAAAGACATGTTTCAACTCGTCGAGGACATTACTTCAAGATAAACGACTTGTCCCGTTGTCAAATGAAGAA
TGATTTACTGGACGTCGCTCTTCACTGTTGAAGTTGATTCTTGAGGAGGTTGTAAAGAAAGAAATTGACAGTCATGAGAATTTCGAAACTGGGGACTTTCTTCTGTTGCT
GTTGCGAAATTCTTTCGGGTAGAATACCTTATTGAAATTCATTTCAATATTGTAGGATCAAACATGTTTGATTCTTTGTAGGTAAAAAGAAAAGCTAATCAAAACTTGTT
CTATGCTGAAATCTTTAAGCTCTCTATTCAACCCAATTCTTACTCTATTTTCAGGAAATCTATCTAACTGACATCAGTTAATGATCGATCGTCTCGAGCTGCTGCTGCTG
TTAATATTTGACAAAACAAACCTTTGTATTGGTTTTTTTTTAA

Protein sequence

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MRLVLAKSSNKGCGTNEFSSSTAMAKRLKRRKALADLRVEESLLLKERELESLHATFKEQTTNNEKLKKMKLNLNFNASSDCLWEESKPVAPSQQCQSVDPTTDNVPATS
AIQTVPGNSTQSELHETQEINSMESGGFFLPDLNMIPAEDCL

Lsi08G012300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome