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Lsi08G012350 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G012350
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionethylene-responsive transcription factor ERF003-like
Genome locationchr08:20809012..20809988
RNA-Seq ExpressionLsi08G012350
SyntenyLsi08G012350
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064898.1 ethylene-responsive transcription factor ERF003-like protein [Cucumis melo var. makuwa]6.8e-4288.89Show/hide
Query:  IWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEAKTPTETAHQP
        IWLGTFETAEDAA+AYDEAARLMCGPRARTNFPFN+NDSNSSSSKLLSANLTAKLHRC MASLH QKPATHRFNSGAD AGIKPLT E  T TE  HQP
Subjt:  IWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEAKTPTETAHQP

XP_004138847.1 ethylene-responsive transcription factor ERF003 [Cucumis sativus]4.7e-4388.24Show/hide
Query:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEAKTPTETAH
        KTRIWLGTFETAEDAA+AYDEAARLMCGPRARTNFPFN+NDSNSSSSKLLSANLTAKLHRC MASLH QKPATHRFNSG D AGIKPLT E  T TE  H
Subjt:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEAKTPTETAH

Query:  QP
        QP
Subjt:  QP

XP_008445254.1 PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo]1.6e-4389.22Show/hide
Query:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEAKTPTETAH
        KTRIWLGTFETAEDAA+AYDEAARLMCGPRARTNFPFN+NDSNSSSSKLLSANLTAKLHRC MASLH QKPATHRFNSGAD AGIKPLT E  T TE  H
Subjt:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEAKTPTETAH

Query:  QP
        QP
Subjt:  QP

XP_022996843.1 ethylene-responsive transcription factor ERF003-like [Cucurbita maxima]1.1e-3174.31Show/hide
Query:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSN--SSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAE-----AK
        KTRIWLGTFETAEDAA+AYDEAARLMCGPRARTNFPFNANDSN  SSSSKLLSANLTAKLHRCYMASLHL  P+  +       A   P+TAE      K
Subjt:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSN--SSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAE-----AK

Query:  TPTETAHQP
        T  ETAHQP
Subjt:  TPTETAHQP

XP_038886181.1 ethylene-responsive transcription factor ERF003-like [Benincasa hispida]2.7e-4694.12Show/hide
Query:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEAKTPTETAH
        KTRIWLGTFETAEDAA+AYDEAARLMCGPRARTNFPFN  DSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAE K  TETAH
Subjt:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEAKTPTETAH

Query:  QP
        QP
Subjt:  QP

TrEMBL top hitse value%identityAlignment
A0A0A0LQD0 AP2/ERF domain-containing protein2.3e-4388.24Show/hide
Query:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEAKTPTETAH
        KTRIWLGTFETAEDAA+AYDEAARLMCGPRARTNFPFN+NDSNSSSSKLLSANLTAKLHRC MASLH QKPATHRFNSG D AGIKPLT E  T TE  H
Subjt:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEAKTPTETAH

Query:  QP
        QP
Subjt:  QP

A0A1S3BBS3 ethylene-responsive transcription factor ERF003-like7.8e-4489.22Show/hide
Query:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEAKTPTETAH
        KTRIWLGTFETAEDAA+AYDEAARLMCGPRARTNFPFN+NDSNSSSSKLLSANLTAKLHRC MASLH QKPATHRFNSGAD AGIKPLT E  T TE  H
Subjt:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEAKTPTETAH

Query:  QP
        QP
Subjt:  QP

A0A5A7VBB0 Ethylene-responsive transcription factor ERF003-like protein3.3e-4288.89Show/hide
Query:  IWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEAKTPTETAHQP
        IWLGTFETAEDAA+AYDEAARLMCGPRARTNFPFN+NDSNSSSSKLLSANLTAKLHRC MASLH QKPATHRFNSGAD AGIKPLT E  T TE  HQP
Subjt:  IWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEAKTPTETAHQP

A0A6J1HGM1 ethylene-responsive transcription factor ERF003-like3.4e-3174.51Show/hide
Query:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEAKTPTETAH
        KTRIWLGTFETAEDAA+AYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHL  P   +          +   A   T  ETAH
Subjt:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEAKTPTETAH

Query:  QP
        QP
Subjt:  QP

A0A6J1KC60 ethylene-responsive transcription factor ERF003-like5.2e-3274.31Show/hide
Query:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSN--SSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAE-----AK
        KTRIWLGTFETAEDAA+AYDEAARLMCGPRARTNFPFNANDSN  SSSSKLLSANLTAKLHRCYMASLHL  P+  +       A   P+TAE      K
Subjt:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSN--SSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAE-----AK

Query:  TPTETAHQP
        T  ETAHQP
Subjt:  TPTETAHQP

SwissProt top hitse value%identityAlignment
P16146 Protein PPLZ021.2e-2578.08Show/hide
Query:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPAT
        KTRIW GTFE+AEDAA+AYDEAARLMCG RARTNFP+N N S SSSSKLLSA L AKLHRCYMASL + +P++
Subjt:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPAT

Q3E958 Ethylene-responsive transcription factor SHINE 33.5e-0947.73Show/hide
Query:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFP-FNANDSNS-------SSSKLLSANLTAKLHR-C-----YMASLHLQKPATH
        K R+WLGTF+TAE AA+AYD+AA LM G  A+TNFP   +N SNS        S K LS  L AKL + C     Y+  L L   ++H
Subjt:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFP-FNANDSNS-------SSSKLLSANLTAKLHR-C-----YMASLHLQKPATH

Q94AW5 Ethylene-responsive transcription factor ERF0033.2e-2682.86Show/hide
Query:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQK
        KTRIWLGTFETAEDAA+AYDEAARLMCGPRARTNFP+N N   +SSSKLLSA LTAKLH+CYMASL + K
Subjt:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQK

Q9LW49 Ethylene-responsive transcription factor 44.2e-1048.24Show/hide
Query:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPF-NANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAG
        K+R+WLGTF+TAE+AAKAYD AAR   GP+A+TNFP  + N S S SS + S++    +H    A L L    T R  S A   G
Subjt:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPF-NANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAG

Q9XI33 Ethylene-responsive transcription factor WIN17.6e-1252.56Show/hide
Query:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNAND-----------------SNSSSSKLLSANLTAKLHRC
        K RIWLGTFETAE+AA+AYDEAA LM G  A+TNFP N N+                 S+S+SS  LS+ L+AKL +C
Subjt:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNAND-----------------SNSSSSKLLSANLTAKLHRC

Arabidopsis top hitse value%identityAlignment
AT1G15360.1 Integrase-type DNA-binding superfamily protein5.4e-1352.56Show/hide
Query:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNAND-----------------SNSSSSKLLSANLTAKLHRC
        K RIWLGTFETAE+AA+AYDEAA LM G  A+TNFP N N+                 S+S+SS  LS+ L+AKL +C
Subjt:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNAND-----------------SNSSSSKLLSANLTAKLHRC

AT1G50640.1 ethylene responsive element binding factor 31.6e-0940Show/hide
Query:  AIYGQASTALSRRSSKTLGFLGLRN--------------SKTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNAN
        A+ G    A    S K + F G+R                K R+WLGTF++AE+AA+AYD AAR + GP+A+TNFP +++
Subjt:  AIYGQASTALSRRSSKTLGFLGLRN--------------SKTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNAN

AT4G34410.1 redox responsive transcription factor 11.2e-0942.05Show/hide
Query:  LSRRSSKTLGFLGLR--------------NSKTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAK
        + +R +K  G+ G+R                 TR+WLGTFETAEDAA+AYD AA    GPRA+ NFPF  + ++S SS + + ++ AK
Subjt:  LSRRSSKTLGFLGLR--------------NSKTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAK

AT5G25190.1 Integrase-type DNA-binding superfamily protein2.2e-2782.86Show/hide
Query:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQK
        KTRIWLGTFETAEDAA+AYDEAARLMCGPRARTNFP+N N   +SSSKLLSA LTAKLH+CYMASL + K
Subjt:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQK

AT5G25390.2 Integrase-type DNA-binding superfamily protein2.5e-1047.73Show/hide
Query:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFP-FNANDSNS-------SSSKLLSANLTAKLHR-C-----YMASLHLQKPATH
        K R+WLGTF+TAE AA+AYD+AA LM G  A+TNFP   +N SNS        S K LS  L AKL + C     Y+  L L   ++H
Subjt:  KTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFP-FNANDSNS-------SSSKLLSANLTAKLHR-C-----YMASLHLQKPATH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATCTATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGACATTGGGGTTCTTGGGTCTCCGAAATTCGAAAACCAGAATTTGGCTTGGTACTTTCGA
AACGGCTGAAGATGCTGCTAAAGCTTACGATGAAGCTGCTCGCTTAATGTGTGGTCCAAGAGCAAGAACTAATTTCCCTTTCAACGCAAATGATTCCAATTCCTCTTCTT
CCAAACTTCTCTCTGCCAATTTGACTGCAAAACTCCACCGTTGCTACATGGCGTCTCTTCATTTGCAGAAACCCGCCACCCATCGCTTCAATTCCGGCGCCGACGCGGCG
GGGATTAAGCCCCTGACGGCGGAGGCAAAAACCCCAACGGAAACCGCACATCAGCCTATGTGTTTATTTATATCTTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTATCTATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGACATTGGGGTTCTTGGGTCTCCGAAATTCGAAAACCAGAATTTGGCTTGGTACTTTCGA
AACGGCTGAAGATGCTGCTAAAGCTTACGATGAAGCTGCTCGCTTAATGTGTGGTCCAAGAGCAAGAACTAATTTCCCTTTCAACGCAAATGATTCCAATTCCTCTTCTT
CCAAACTTCTCTCTGCCAATTTGACTGCAAAACTCCACCGTTGCTACATGGCGTCTCTTCATTTGCAGAAACCCGCCACCCATCGCTTCAATTCCGGCGCCGACGCGGCG
GGGATTAAGCCCCTGACGGCGGAGGCAAAAACCCCAACGGAAACCGCACATCAGCCTATGTGTTTATTTATATCTTACTAG
Protein sequenceShow/hide protein sequence
MAIYGQASTALSRRSSKTLGFLGLRNSKTRIWLGTFETAEDAAKAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAA
GIKPLTAEAKTPTETAHQPMCLFISY