; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G012400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G012400
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr08:20850425..20851249
RNA-Seq ExpressionLsi08G012400
SyntenyLsi08G012400
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064894.1 putative CCR4-associated factor 1-like protein 7 [Cucumis melo var. makuwa]9.1e-15595.99Show/hide
Query:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWN NLEEEFALIR+IVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTL+ENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI
        FNFREFN+C+DIYASDSIELLRECGIDF+KT+EEGIDVNRF ELLMSSGIVLNDNI+WVTFHSGYDFGYLLKLLTCRNLP+TQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

XP_004138706.1 probable CCR4-associated factor 1 homolog 7 [Cucumis sativus]1.8e-15596.35Show/hide
Query:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWN NLEEEFALIR+IVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTL+ENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI
        FNFREFN+C+DIYASDSIELLRECGIDF+KT+EEGIDVNRF ELLMSSGIVLNDNI+WVTFHSGYDFGYLLKLLTCRNLP+TQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

XP_008445257.1 PREDICTED: LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 7 [Cucumis melo]2.7e-15495.99Show/hide
Query:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWN NLEEEFALIR+IVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTL+ENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI
        FNFREFN+C+DIYASDSIELLRECGIDF+KT+EEGIDVNRF ELLMSSGIVLNDNI WVTFHSGYDFGYLLKLLTCRNLP+TQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

XP_022951690.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata]3.4e-14991.97Show/hide
Query:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESI+IREVWNHN+EEEFAL+REIVDQFNYIAMDTEFPGVVVRPVG+FKNIN+YNY+TLK+NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI
        FNFREFN+  DI+ASDSIELLR+CGIDF+K NEEGIDVN F ELLMSSGIVLNDN+YWVTFHSGYDFGYLLKLLTCR+LP TQA FFDLI+MYFPMVYDI
Subjt:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLM+FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

XP_038886120.1 probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]1.4e-15898.91Show/hide
Query:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI
        FNFREFN+CEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP TQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

TrEMBL top hitse value%identityAlignment
A0A0A0LSM4 Poly(A)-specific ribonuclease8.9e-15696.35Show/hide
Query:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWN NLEEEFALIR+IVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTL+ENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI
        FNFREFN+C+DIYASDSIELLRECGIDF+KT+EEGIDVNRF ELLMSSGIVLNDNI+WVTFHSGYDFGYLLKLLTCRNLP+TQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

A0A1S3BD02 Poly(A)-specific ribonuclease1.3e-15495.99Show/hide
Query:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWN NLEEEFALIR+IVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTL+ENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI
        FNFREFN+C+DIYASDSIELLRECGIDF+KT+EEGIDVNRF ELLMSSGIVLNDNI WVTFHSGYDFGYLLKLLTCRNLP+TQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

A0A5A7VC99 Poly(A)-specific ribonuclease4.4e-15595.99Show/hide
Query:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWN NLEEEFALIR+IVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTL+ENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI
        FNFREFN+C+DIYASDSIELLRECGIDF+KT+EEGIDVNRF ELLMSSGIVLNDNI+WVTFHSGYDFGYLLKLLTCRNLP+TQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

A0A6J1GJJ8 Poly(A)-specific ribonuclease1.6e-14991.97Show/hide
Query:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESI+IREVWNHN+EEEFAL+REIVDQFNYIAMDTEFPGVVVRPVG+FKNIN+YNY+TLK+NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI
        FNFREFN+  DI+ASDSIELLR+CGIDF+K NEEGIDVN F ELLMSSGIVLNDN+YWVTFHSGYDFGYLLKLLTCR+LP TQA FFDLI+MYFPMVYDI
Subjt:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLM+FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

A0A6J1KLE0 Poly(A)-specific ribonuclease1.6e-14991.97Show/hide
Query:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESI+IREVWNHN+EEEFAL+REIVDQFNYIAMDTEFPGVVVRPVG+FKNIN+YNY+TLK+NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI
        FNFREFN+  DI+ASDSIELLR+CGIDF+K NEEGIDVN F ELLMSSGIVLNDN+YWVTFHSGYDFGYLLKLLTCR+LP TQA FFDLI+MYFPMVYDI
Subjt:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLM+FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

SwissProt top hitse value%identityAlignment
Q3ZC01 CCR4-NOT transcription complex subunit 77.7e-8054.48Show/hide
Query:  SINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNL
        S  I EVW  NL+EE   IR+++ ++NY+AMDTEFPGVV RP+G F++  +Y Y+ L+ NVD LK+IQLGLTF +E G  P  GT     WQFNF+ FNL
Subjt:  SINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNL

Query:  CEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDIKHLMRFCN
         ED+YA DSIELL   GI FKK  EEGI+   FAELLM+SG+VL + + W++FHSGYDFGYL+K+LT  NLP+ + +FF+++ ++FP++YD+K+LM+ C 
Subjt:  CEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDIKHLMRFCN

Query:  SFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNG--STQKYAGVLYGLGVETGQTTN
        +  GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R+ FF       KY G LYGLG  +    N
Subjt:  SFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNG--STQKYAGVLYGLGVETGQTTN

Q9LEU4 Probable CCR4-associated factor 1 homolog 104.0e-12176.49Show/hide
Query:  KGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K +SI IREVW++NL EEFALIREIVD+F+YIAMDTEFPGVV++PV +FK  N+ NYRTLKENVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDIKHLMR
        FN+ EDIYAS+SIELLR+CGIDFKK  E+GIDV RF EL+MSSGIVLND I WVTFH GYDFGYL+KLLTC+ LP  QA+FF L+++YFP VYDIKHLM 
Subjt:  FNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDIKHLMR

Query:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT
        FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE G TT
Subjt:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT

Q9S9P2 Probable CCR4-associated factor 1 homolog 21.5e-9663.26Show/hide
Query:  ESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNIN------EYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQF
        ++I IREVWNHNLE+E ALI + +D F Y+AMDTEFPG+V + V +  N N      EYNY TLK NV+ LKLIQLGLT SDE GNLPTCGT+K CIWQF
Subjt:  ESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNIN------EYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQF

Query:  NFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDIK
        NFREFN+  D++A DSIELLR+  ID +K NE G+D  RFAELLM SG+VLND I+WVTFH GYDFGYLLKLL+ + LP+  ++FFD +  +FP+VYDIK
Subjt:  NFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDIK

Query:  HLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGL
        +LM FC + +GGL K+AELL V+R+G+ HQAGSDSLLT  TF K+++ FF GS  KY+G L+GL
Subjt:  HLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 64.0e-12173.8Show/hide
Query:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVWN NL+EE  LIR++VD F Y+AMDTEFPG+VVRPVG+FK+  +Y+Y TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI
        FNFREF+L  DI+A DSIELL++ GID  K   +GID  RFAELLMSSGIVLN+N++WVTFHSGYDFGYLLKLLTC+NLPD+Q +FF LI++YFP VYDI
Subjt:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        KHLM+FCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVE GQ
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

Q9SKZ2 Probable CCR4-associated factor 1 homolog 75.6e-12375.74Show/hide
Query:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW
        MS+  K +SI IREVWN NLE E ALIRE+VD F ++AMDTEFPG+V RPVG+FK   EY+Y TLK NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW

Query:  QFNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYD
        QFNFREF+L  DIYA+DSIELLR+ GIDF K NE GID  RFAELLMSSGIVLN+N++WVTFHSGYDFGYLLKLLTC+NLP+TQ  FF++I +YFP VYD
Subjt:  QFNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYD

Query:  IKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        IKHLM+FCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVE GQ
Subjt:  IKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-12273.8Show/hide
Query:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVWN NL+EE  LIR++VD F Y+AMDTEFPG+VVRPVG+FK+  +Y+Y TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI
        FNFREF+L  DI+A DSIELL++ GID  K   +GID  RFAELLMSSGIVLN+N++WVTFHSGYDFGYLLKLLTC+NLPD+Q +FF LI++YFP VYDI
Subjt:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        KHLM+FCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVE GQ
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-12273.8Show/hide
Query:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVWN NL+EE  LIR++VD F Y+AMDTEFPG+VVRPVG+FK+  +Y+Y TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI
        FNFREF+L  DI+A DSIELL++ GID  K   +GID  RFAELLMSSGIVLN+N++WVTFHSGYDFGYLLKLLTC+NLPD+Q +FF LI++YFP VYDI
Subjt:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        KHLM+FCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVE GQ
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.1e-12173.88Show/hide
Query:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVWN NL+EE  LIR++VD F Y+AMDTEFPG+VVRPVG+FK+  +Y+Y TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI
        FNFREF+L  DI+A DSIELL++ GID  K   +GID  RFAELLMSSGIVLN+N++WVTFHSGYDFGYLLKLLTC+NLPD+Q +FF LI++YFP VYDI
Subjt:  FNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE
        KHLM+FCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVE
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.0e-12475.74Show/hide
Query:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW
        MS+  K +SI IREVWN NLE E ALIRE+VD F ++AMDTEFPG+V RPVG+FK   EY+Y TLK NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW

Query:  QFNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYD
        QFNFREF+L  DIYA+DSIELLR+ GIDF K NE GID  RFAELLMSSGIVLN+N++WVTFHSGYDFGYLLKLLTC+NLP+TQ  FF++I +YFP VYD
Subjt:  QFNFREFNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYD

Query:  IKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        IKHLM+FCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVE GQ
Subjt:  IKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-12276.49Show/hide
Query:  KGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K +SI IREVW++NL EEFALIREIVD+F+YIAMDTEFPGVV++PV +FK  N+ NYRTLKENVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDIKHLMR
        FN+ EDIYAS+SIELLR+CGIDFKK  E+GIDV RF EL+MSSGIVLND I WVTFH GYDFGYL+KLLTC+ LP  QA+FF L+++YFP VYDIKHLM 
Subjt:  FNLCEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDIKHLMR

Query:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT
        FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE G TT
Subjt:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTTTGCCGAAAGGTGAATCGATTAATATCCGTGAGGTGTGGAACCATAATTTGGAGGAAGAATTTGCACTAATACGTGAAATCGTCGACCAATTTAACTACAT
AGCGATGGATACCGAGTTCCCTGGCGTGGTTGTTCGCCCTGTGGGTTCTTTCAAGAATATCAATGAGTATAACTACCGAACCCTCAAAGAGAATGTCGACACCTTGAAGT
TGATTCAATTGGGTCTTACGTTCTCTGATGAGAATGGGAATCTTCCAACTTGTGGAACCGATAAGTTTTGCATTTGGCAGTTCAATTTCCGCGAATTCAACCTTTGTGAA
GACATTTATGCAAGTGATTCCATTGAGCTTTTGCGTGAGTGTGGTATTGATTTTAAGAAGACCAATGAAGAGGGAATTGATGTCAATCGCTTCGCTGAGCTTCTCATGTC
ATCTGGGATTGTGTTAAACGATAATATTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCGAAACTTACCAGATACCCAGG
CGGAATTCTTTGATTTGATCCATATGTATTTCCCAATGGTTTATGATATCAAGCATTTGATGAGGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTA
TTAGAAGTGGAGAGGATTGGGGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACTTTTTTCAATGGTTCTACACAGAA
ATACGCAGGTGTTTTATACGGTCTCGGTGTTGAAACTGGACAGACGACAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATTTTGCCGAAAGGTGAATCGATTAATATCCGTGAGGTGTGGAACCATAATTTGGAGGAAGAATTTGCACTAATACGTGAAATCGTCGACCAATTTAACTACAT
AGCGATGGATACCGAGTTCCCTGGCGTGGTTGTTCGCCCTGTGGGTTCTTTCAAGAATATCAATGAGTATAACTACCGAACCCTCAAAGAGAATGTCGACACCTTGAAGT
TGATTCAATTGGGTCTTACGTTCTCTGATGAGAATGGGAATCTTCCAACTTGTGGAACCGATAAGTTTTGCATTTGGCAGTTCAATTTCCGCGAATTCAACCTTTGTGAA
GACATTTATGCAAGTGATTCCATTGAGCTTTTGCGTGAGTGTGGTATTGATTTTAAGAAGACCAATGAAGAGGGAATTGATGTCAATCGCTTCGCTGAGCTTCTCATGTC
ATCTGGGATTGTGTTAAACGATAATATTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCGAAACTTACCAGATACCCAGG
CGGAATTCTTTGATTTGATCCATATGTATTTCCCAATGGTTTATGATATCAAGCATTTGATGAGGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTA
TTAGAAGTGGAGAGGATTGGGGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACTTTTTTCAATGGTTCTACACAGAA
ATACGCAGGTGTTTTATACGGTCTCGGTGTTGAAACTGGACAGACGACAAATTGA
Protein sequenceShow/hide protein sequence
MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLCE
DIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPDTQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAEL
LEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN