; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G012410 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G012410
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr08:20857869..20858693
RNA-Seq ExpressionLsi08G012410
SyntenyLsi08G012410
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064893.1 putative CCR4-associated factor 1-like protein 7 [Cucumis melo var. makuwa]3.7e-15697.08Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+NYRTLKDNVEMLKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
        FNFREFNIG+DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
Subjt:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLR+TFFNGSIQKYAGVLYGLGV+NGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN

XP_004138704.1 probable CCR4-associated factor 1 homolog 7 [Cucumis sativus]8.3e-15696.72Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+NYRTLKDNVEMLKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
        FNFREFNIG+DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPV+YDI
Subjt:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLR+TFFNGSIQKYAGVLYGLGV+NGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN

XP_008445259.1 PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis melo]3.7e-15697.08Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+NYRTLKDNVEMLKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
        FNFREFNIG+DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
Subjt:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLR+TFFNGSIQKYAGVLYGLGV+NGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN

XP_022996818.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita maxima]9.4e-15294.89Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWN NLEEEFALIREIVD+FNYIAMDTEFPGVVLRPLGAFKNINDYNY+TLKDNV+MLKLIQLGLTFSDENGN PTCGTD FCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
        FNFREFNIG+DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP  Q GFF+LINVYFPVVYDI
Subjt:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA TFRKLRNTFFNGSIQKYAGVLYGLGV+NGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN

XP_038885551.1 probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]1.8e-15898.54Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIND+NYRTLKDNV+MLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
        FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN+DVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
Subjt:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLR+TFFNGSIQKYAGVLYGLGVDNGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN

TrEMBL top hitse value%identityAlignment
A0A0A0LMH2 Poly(A)-specific ribonuclease4.0e-15696.72Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+NYRTLKDNVEMLKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
        FNFREFNIG+DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPV+YDI
Subjt:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLR+TFFNGSIQKYAGVLYGLGV+NGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN

A0A1S3BD45 Poly(A)-specific ribonuclease1.8e-15697.08Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+NYRTLKDNVEMLKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
        FNFREFNIG+DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
Subjt:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLR+TFFNGSIQKYAGVLYGLGV+NGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN

A0A5A7V9Q6 Poly(A)-specific ribonuclease1.8e-15697.08Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+NYRTLKDNVEMLKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
        FNFREFNIG+DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
Subjt:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLR+TFFNGSIQKYAGVLYGLGV+NGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN

A0A6J1HCG0 Poly(A)-specific ribonuclease1.7e-15194.89Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWN NLEEEFALIREIVD+FNYIAMDTEFPGVVLRPLGAFKNINDYNY+TLKDNV+MLKLIQLGLTFSDENGNLPTCGTD FCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
        FNFREFNI +DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP  Q GFF+LINVYFPVVYDI
Subjt:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA TFRKLRNTFFNGSIQKYAGVLYGLGV+NGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN

A0A6J1KC39 Poly(A)-specific ribonuclease4.6e-15294.89Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWN NLEEEFALIREIVD+FNYIAMDTEFPGVVLRPLGAFKNINDYNY+TLKDNV+MLKLIQLGLTFSDENGN PTCGTD FCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
        FNFREFNIG+DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP  Q GFF+LINVYFPVVYDI
Subjt:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA TFRKLRNTFFNGSIQKYAGVLYGLGV+NGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN

SwissProt top hitse value%identityAlignment
Q3ZC01 CCR4-NOT transcription complex subunit 71.5e-8056.15Show/hide
Query:  SIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI
        S +I EVW  NL+EE   IR+++ ++NY+AMDTEFPGVV RP+G F++  DY Y+ L+ NV++LK+IQLGLTF +E G  P  GT     WQFNF+ FN+
Subjt:  SIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI

Query:  GNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDIKHLMKFCN
          D++A DSIELL   GI F+K+ EEGI+   F ELLM+SGVVL + V W++FHSGYDFGYL+K+LT   LP ++  FFE++ ++FPV+YD+K+LMK C 
Subjt:  GNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDIKHLMKFCN

Query:  SLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQ--KYAGVLYGLG
        +L GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R  FF   I   KY G LYGLG
Subjt:  SLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQ--KYAGVLYGLG

Q9LEU4 Probable CCR4-associated factor 1 homolog 101.3e-12276.12Show/hide
Query:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K DSI IREVW+ NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+  FK  ND NYRTLK+NV++LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDIKHLMK
        FNIG DI+AS+SIELLRQCGIDF+KN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA FF+L+ VYFP VYDIKHLM 
Subjt:  FNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRT
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL+  +F GS +KY GVLYGLGV++G  T
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRT

Q9S9P2 Probable CCR4-associated factor 1 homolog 28.2e-9864.02Show/hide
Query:  DSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIN------DYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQF
        D+I+IREVWN NLE+E ALI + +D+F Y+AMDTEFPG+V + + A  N N      +YNY TLK NV MLKLIQLGLT SDE GNLPTCGT+K CIWQF
Subjt:  DSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIN------DYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQF

Query:  NFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDIK
        NFREFN+ +D+FA DSIELLR+  ID +KNNE G+D  RF ELLM SGVVLND ++WVTFH GYDFGYLLKLL+ + LP + + FF+ +  +FPVVYDIK
Subjt:  NFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDIK

Query:  HLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGL
        +LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  TF K++  FF GS+ KY+G L+GL
Subjt:  HLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 63.0e-12474.91Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY+Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
        FNFREF++ +DIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP+ Q  FF+LINVYFP VYDI
Subjt:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQ
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL+  FF G + KY+GVLYGLGV+NGQ
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQ

Q9SKZ2 Probable CCR4-associated factor 1 homolog 73.5e-12576.1Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTD-KFCIW
        MS+  K DSIQIREVWN NLE E ALIRE+VD+F ++AMDTEFPG+V RP+G FK   +Y+Y TLK NV +LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTD-KFCIW

Query:  QFNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYD
        QFNFREF++ +DI+A+DSIELLRQ GIDF KNNE GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP  Q GFFE+I+VYFP VYD
Subjt:  QFNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYD

Query:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQ
        IKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL+  FF GS++KY+GVLYGLGV+NGQ
Subjt:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQ

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.1e-12574.91Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY+Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
        FNFREF++ +DIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP+ Q  FF+LINVYFP VYDI
Subjt:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQ
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL+  FF G + KY+GVLYGLGV+NGQ
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQ

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.1e-12574.91Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY+Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
        FNFREF++ +DIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP+ Q  FF+LINVYFP VYDI
Subjt:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQ
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL+  FF G + KY+GVLYGLGV+NGQ
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQ

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.0e-12474.72Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY+Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI
        FNFREF++ +DIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP+ Q  FF+LINVYFP VYDI
Subjt:  FNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDN
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL+  FF G + KY+GVLYGLGV+N
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDN

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.5e-12676.1Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTD-KFCIW
        MS+  K DSIQIREVWN NLE E ALIRE+VD+F ++AMDTEFPG+V RP+G FK   +Y+Y TLK NV +LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTD-KFCIW

Query:  QFNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYD
        QFNFREF++ +DI+A+DSIELLRQ GIDF KNNE GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP  Q GFFE+I+VYFP VYD
Subjt:  QFNFREFNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYD

Query:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQ
        IKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL+  FF GS++KY+GVLYGLGV+NGQ
Subjt:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQ

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.9e-12476.12Show/hide
Query:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K DSI IREVW+ NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+  FK  ND NYRTLK+NV++LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDIKHLMK
        FNIG DI+AS+SIELLRQCGIDF+KN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA FF+L+ VYFP VYDIKHLM 
Subjt:  FNIGNDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRT
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL+  +F GS +KY GVLYGLGV++G  T
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTTTACCCAAAGGCGATTCGATTCAAATCCGTGAAGTATGGAACGCTAATTTGGAAGAAGAGTTTGCGCTTATCCGTGAGATTGTTGATGAGTTTAATTACAT
AGCTATGGATACTGAGTTCCCTGGTGTTGTACTTCGTCCTCTGGGTGCCTTCAAGAATATCAATGATTACAACTACCGGACTCTTAAGGATAATGTTGAGATGTTGAAGT
TGATTCAGTTGGGTCTTACGTTCTCTGATGAGAATGGGAATCTCCCAACTTGTGGAACTGATAAGTTTTGCATTTGGCAGTTCAATTTCCGTGAGTTCAACATTGGTAAT
GATATTTTTGCTAGTGATTCCATCGAGCTTCTTCGTCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTCAATCGTTTTGGTGAGCTTCTAATGTC
TTCTGGGGTTGTGTTAAACGATGATGTGAACTGGGTGACGTTTCATAGTGGGTATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAGGCTTACCGAATGATCAGG
CAGGTTTTTTTGAGTTGATCAATGTCTATTTTCCAGTGGTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCATGGTGGGCTGAACAAGCTTGCGGAACTA
TTAGAGGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGAATACCTTTTTCAATGGTTCTATACAGAA
ATACGCAGGTGTTCTGTATGGTCTCGGTGTTGACAATGGACAACGTACTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATTTTACCCAAAGGCGATTCGATTCAAATCCGTGAAGTATGGAACGCTAATTTGGAAGAAGAGTTTGCGCTTATCCGTGAGATTGTTGATGAGTTTAATTACAT
AGCTATGGATACTGAGTTCCCTGGTGTTGTACTTCGTCCTCTGGGTGCCTTCAAGAATATCAATGATTACAACTACCGGACTCTTAAGGATAATGTTGAGATGTTGAAGT
TGATTCAGTTGGGTCTTACGTTCTCTGATGAGAATGGGAATCTCCCAACTTGTGGAACTGATAAGTTTTGCATTTGGCAGTTCAATTTCCGTGAGTTCAACATTGGTAAT
GATATTTTTGCTAGTGATTCCATCGAGCTTCTTCGTCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTCAATCGTTTTGGTGAGCTTCTAATGTC
TTCTGGGGTTGTGTTAAACGATGATGTGAACTGGGTGACGTTTCATAGTGGGTATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAGGCTTACCGAATGATCAGG
CAGGTTTTTTTGAGTTGATCAATGTCTATTTTCCAGTGGTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCATGGTGGGCTGAACAAGCTTGCGGAACTA
TTAGAGGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGAATACCTTTTTCAATGGTTCTATACAGAA
ATACGCAGGTGTTCTGTATGGTCTCGGTGTTGACAATGGACAACGTACTAATTGA
Protein sequenceShow/hide protein sequence
MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYRTLKDNVEMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGN
DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAEL
LEVERIGVCHQAGSDSLLTACTFRKLRNTFFNGSIQKYAGVLYGLGVDNGQRTN