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Lsi08G012720 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G012720
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlutamate receptor
Genome locationchr08:21131435..21131740
RNA-Seq ExpressionLsi08G012720
SyntenyLsi08G012720
Gene Ontology termsGO:0034220 - ion transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0015276 - ligand-gated ion channel activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064863.1 glutamate receptor 2.1-like isoform X1 [Cucumis melo var. makuwa]1.1e-3383.33Show/hide
Query:  MRRRKGLGGGFGVLVVVIFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAA
        MRR+KGLGGGF V+VVVIFLNILL     V E  EEKEAAAAAAVKVKVGVVLDLNV VGKM LSCISMALADFYASR YYKTR+ILNPIDSNG+V+RAA
Subjt:  MRRRKGLGGGFGVLVVVIFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAA

Query:  AA
        AA
Subjt:  AA

XP_004138837.2 glutamate receptor 2.5 [Cucumis sativus]1.2e-3078.1Show/hide
Query:  MRRRKGLGGGFG---VLVVVIFLNILL----AVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVL
        MRR+KGLGGGF    V+VVVIFLNILL     V E  E+KEAAAAAAVKVKVGVVLDLNV VGK+ LSCISMALADFYA R YYKTR+ILNPIDSNG+V+
Subjt:  MRRRKGLGGGFG---VLVVVIFLNILL----AVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVL

Query:  RAAAA
        RAAAA
Subjt:  RAAAA

XP_008445300.1 PREDICTED: glutamate receptor 2.1-like isoform X1 [Cucumis melo]2.8e-3282.52Show/hide
Query:  MRRRKGLGGGFG-VLVVVIFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRA
        MRR+KGLGGGF  V+VVVIFLNILL     V E  EEKEAAAAAAVKVKVGVVLDLNV VGKM LSCISMALADFYASR YYKTR+ILNPIDSNG+V+RA
Subjt:  MRRRKGLGGGFG-VLVVVIFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRA

Query:  AAA
        AAA
Subjt:  AAA

XP_008445301.1 PREDICTED: glutamate receptor 2.8-like isoform X2 [Cucumis melo]2.8e-3282.52Show/hide
Query:  MRRRKGLGGGFG-VLVVVIFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRA
        MRR+KGLGGGF  V+VVVIFLNILL     V E  EEKEAAAAAAVKVKVGVVLDLNV VGKM LSCISMALADFYASR YYKTR+ILNPIDSNG+V+RA
Subjt:  MRRRKGLGGGFG-VLVVVIFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRA

Query:  AAA
        AAA
Subjt:  AAA

XP_023002214.1 glutamate receptor 2.2-like [Cucurbita maxima]5.6e-2570Show/hide
Query:  MRRRKGLGGGFGVLVVVIFLNILLAVA--EMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA
        MRR KGL GGFGV+V+V+FLN+L+ VA  EMA E+E  AA  VKVKVGVVLDLN+ VG+MGLSC+SMALAD Y+SR YYKTR+ L+ IDSN TV+ AAAA
Subjt:  MRRRKGLGGGFGVLVVVIFLNILLAVA--EMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA

TrEMBL top hitse value%identityAlignment
A0A0A0LSQ2 ANF_receptor domain-containing protein5.6e-3178.1Show/hide
Query:  MRRRKGLGGGFG---VLVVVIFLNILL----AVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVL
        MRR+KGLGGGF    V+VVVIFLNILL     V E  E+KEAAAAAAVKVKVGVVLDLNV VGK+ LSCISMALADFYA R YYKTR+ILNPIDSNG+V+
Subjt:  MRRRKGLGGGFG---VLVVVIFLNILL----AVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVL

Query:  RAAAA
        RAAAA
Subjt:  RAAAA

A0A1S3BBW2 Glutamate receptor1.3e-3282.52Show/hide
Query:  MRRRKGLGGGFG-VLVVVIFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRA
        MRR+KGLGGGF  V+VVVIFLNILL     V E  EEKEAAAAAAVKVKVGVVLDLNV VGKM LSCISMALADFYASR YYKTR+ILNPIDSNG+V+RA
Subjt:  MRRRKGLGGGFG-VLVVVIFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRA

Query:  AAA
        AAA
Subjt:  AAA

A0A1S3BCC2 Glutamate receptor1.3e-3282.52Show/hide
Query:  MRRRKGLGGGFG-VLVVVIFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRA
        MRR+KGLGGGF  V+VVVIFLNILL     V E  EEKEAAAAAAVKVKVGVVLDLNV VGKM LSCISMALADFYASR YYKTR+ILNPIDSNG+V+RA
Subjt:  MRRRKGLGGGFG-VLVVVIFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRA

Query:  AAA
        AAA
Subjt:  AAA

A0A5A7V9M7 Glutamate receptor5.4e-3483.33Show/hide
Query:  MRRRKGLGGGFGVLVVVIFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAA
        MRR+KGLGGGF V+VVVIFLNILL     V E  EEKEAAAAAAVKVKVGVVLDLNV VGKM LSCISMALADFYASR YYKTR+ILNPIDSNG+V+RAA
Subjt:  MRRRKGLGGGFGVLVVVIFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAA

Query:  AA
        AA
Subjt:  AA

A0A6J1KPT9 Glutamate receptor2.7e-2570Show/hide
Query:  MRRRKGLGGGFGVLVVVIFLNILLAVA--EMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA
        MRR KGL GGFGV+V+V+FLN+L+ VA  EMA E+E  AA  VKVKVGVVLDLN+ VG+MGLSC+SMALAD Y+SR YYKTR+ L+ IDSN TV+ AAAA
Subjt:  MRRRKGLGGGFGVLVVVIFLNILLAVA--EMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA

SwissProt top hitse value%identityAlignment
O81078 Glutamate receptor 2.91.0e-0549.12Show/hide
Query:  KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA
        ++KVGVVLDLN    K+ L+ I MA++DFYA    Y TRL L+  DS    ++A+AA
Subjt:  KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA

Q9C5V5 Glutamate receptor 2.81.0e-0547.37Show/hide
Query:  KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA
        ++KVGVVLDLN    K+ L+ I++AL+DFY     Y+TRL L+  DS    ++A+AA
Subjt:  KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA

Q9LFN5 Glutamate receptor 2.54.6e-0640Show/hide
Query:  LVVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA
        L ++IFL + L ++    +KE     A++VKVG+VL  NV +  + L  I+M+L++FY +   +KTR++LN  DS  TV+ AAA+
Subjt:  LVVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA

Q9LFN8 Glutamate receptor 2.62.7e-0635.29Show/hide
Query:  LVVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA
        L ++ F+N L+ + +  +E        ++V+VG+VLD N  +  + L  I+M+L++FY +   +KTR++LN  DS  TV+ AAA+
Subjt:  LVVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA

Q9SHV1 Glutamate receptor 2.21.3e-0543.86Show/hide
Query:  KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA
        +V +GVV D+      + + CI+M+LADFY+SR  ++TRL++N  DS   V+ AA A
Subjt:  KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA

Arabidopsis top hitse value%identityAlignment
AT2G24720.1 glutamate receptor 2.29.5e-0743.86Show/hide
Query:  KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA
        +V +GVV D+      + + CI+M+LADFY+SR  ++TRL++N  DS   V+ AA A
Subjt:  KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA

AT2G29100.1 glutamate receptor 2.97.3e-0749.12Show/hide
Query:  KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA
        ++KVGVVLDLN    K+ L+ I MA++DFYA    Y TRL L+  DS    ++A+AA
Subjt:  KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA

AT2G29110.1 glutamate receptor 2.87.3e-0747.37Show/hide
Query:  KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA
        ++KVGVVLDLN    K+ L+ I++AL+DFY     Y+TRL L+  DS    ++A+AA
Subjt:  KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA

AT5G11180.1 glutamate receptor 2.61.9e-0735.29Show/hide
Query:  LVVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA
        L ++ F+N L+ + +  +E        ++V+VG+VLD N  +  + L  I+M+L++FY +   +KTR++LN  DS  TV+ AAA+
Subjt:  LVVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA

AT5G48400.1 Glutamate receptor family protein2.1e-0638.55Show/hide
Query:  VLVVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRA
        +LV++ F++   A ++  ++ +      ++V+VG+VLDL    GK+  S +SMAL+DFY +   YKTRL L   DS+G  L A
Subjt:  VLVVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGAAGAAAGGGTTTGGGAGGTGGTTTTGGGGTGTTGGTGGTCGTTATCTTCCTTAACATATTATTGGCGGTGGCGGAGATGGCGGAGGAGAAGGAGGCGGCTGC
GGCTGCGGCGGTGAAAGTGAAGGTGGGTGTGGTTTTGGATTTGAATGTTTTTGTTGGGAAGATGGGTCTGAGTTGCATTTCGATGGCTCTCGCTGATTTCTATGCTTCTC
GGGGATATTATAAGACCAGACTGATCCTTAACCCCATTGATTCCAATGGCACTGTTCTTCGTGCAGCTGCTGCAGGTTCTCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAGAAGAAAGGGTTTGGGAGGTGGTTTTGGGGTGTTGGTGGTCGTTATCTTCCTTAACATATTATTGGCGGTGGCGGAGATGGCGGAGGAGAAGGAGGCGGCTGC
GGCTGCGGCGGTGAAAGTGAAGGTGGGTGTGGTTTTGGATTTGAATGTTTTTGTTGGGAAGATGGGTCTGAGTTGCATTTCGATGGCTCTCGCTGATTTCTATGCTTCTC
GGGGATATTATAAGACCAGACTGATCCTTAACCCCATTGATTCCAATGGCACTGTTCTTCGTGCAGCTGCTGCAGGTTCTCTATAA
Protein sequenceShow/hide protein sequence
MRRRKGLGGGFGVLVVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAAGSL