; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G013070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G013070
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSec-independent protein translocase protein TATC
Genome locationchr08:21424604..21425212
RNA-Seq ExpressionLsi08G013070
SyntenyLsi08G013070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064835.1 sec-independent protein translocase protein TATC [Cucumis melo var. makuwa]9.9e-8278.71Show/hide
Query:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVK
        ME VLIPF ADQSRSF PQN SPATVH GLLNFP   +PY   RHHQQPPLLPLPRRP PP ETGA +F R K +K RD SL PKKSKPIKRS+GP A K
Subjt:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVK

Query:  STMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR
        ST+E VI+DSTNRLGPEP HVPKDLWRVLGLR SAP C+  +S  TAAE+EFSGSA S SPPPSSVPLPKFSLRRKVV CNVE AGVDAGATDNLRRLLR
Subjt:  STMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR

Query:  LR
        LR
Subjt:  LR

XP_022962625.1 uncharacterized protein LOC111463019 [Cucurbita moschata]6.4e-8180.2Show/hide
Query:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVK
        ME VLIPF A++SRS K +NF PATVH GLLN PPPAVP YSHR  QQPPLLPLPRRPFPP   GA   CRPKG KSRD SLTPKKSKPIKRS+GP A+K
Subjt:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVK

Query:  STMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR
        ST EF+IVDSTNRLGPEPSHVPKDLWRVLGLRSSAPP EG    G   E EFSGSAF VSPPPSSVPLPKF+LRR+ +SCNVEAAGVDAGATDNLRRLLR
Subjt:  STMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR

Query:  LR
        LR
Subjt:  LR

XP_022997633.1 uncharacterized protein LOC111492508 [Cucurbita maxima]2.4e-8381.19Show/hide
Query:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVK
        MEAVLIPF A++SRS K +NFSPATVH G+LN PPPAVP YSHRHHQQPPLLPLP RPFPP   G    CRPKG KSRD SLTPKKSKPIKRS+GP A+K
Subjt:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVK

Query:  STMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR
        ST EF+IVDSTNRLGPEPSHVPKDLWRVLGLRSSAPP EG    G + E EFSGSAF VSPPPSSVPLPKF+LRR+ VSCNVEAAGVDAGATDNLRRLLR
Subjt:  STMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR

Query:  LR
        LR
Subjt:  LR

XP_023546813.1 proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo]6.2e-8482.18Show/hide
Query:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVK
        MEAVLIPF A++SRS K  NFSPATVH GLLN PPPAVP YSHRHHQQPPLLPLPRRPFPP   GA   CRPKG KSRD SLTPKKSKPIKRS+GP A+K
Subjt:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVK

Query:  STMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR
        ST EF+IVDSTNRLGPEPSHVPKDLWRVLGLRSSAPP EG    G + E EFSGS F VSPPPSSVPLPKF+LRR+ VSCNVEAAGVDAGATDNLRRLLR
Subjt:  STMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR

Query:  LR
        LR
Subjt:  LR

XP_038884839.1 uncharacterized protein LOC120075485 [Benincasa hispida]3.5e-9589.66Show/hide
Query:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSK-GPSAV
        MEAVL+PF   +SRSF PQNFSPATVHGGL NFPPPAV Y+SHRHHQQPPLLPLPRRPFPPPETGA AFCRPK  KSRD SLTPKKSKPIKRSK GP AV
Subjt:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSK-GPSAV

Query:  KSTMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLL
        KST+EFVIVDSTNRLGPEPSHVPKDLW+VLGL+SSAPPCEG++S GTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLL
Subjt:  KSTMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLL

Query:  RLR
        RLR
Subjt:  RLR

TrEMBL top hitse value%identityAlignment
A0A0A0LN70 Uncharacterized protein3.8e-7976.73Show/hide
Query:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVK
        ME V IPF ADQSR F PQNFSPA VHGG LNFP P + Y S R HQQPPLLPLPRRP PP E GA    RPK M+ RD SLTPKKSKPIKRS+GP A K
Subjt:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVK

Query:  STMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR
        ST+E VIVDSTNRLGPEPSHVPKDL  +LGLR S P CE  +S  TAAE+EFSGSA+S SPPPSSVPLPKFSLRRKVV CNVEA+GVDAGATDNLRRLLR
Subjt:  STMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR

Query:  LR
        +R
Subjt:  LR

A0A5A7VG22 Sec-independent protein translocase protein TATC4.8e-8278.71Show/hide
Query:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVK
        ME VLIPF ADQSRSF PQN SPATVH GLLNFP   +PY   RHHQQPPLLPLPRRP PP ETGA +F R K +K RD SL PKKSKPIKRS+GP A K
Subjt:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVK

Query:  STMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR
        ST+E VI+DSTNRLGPEP HVPKDLWRVLGLR SAP C+  +S  TAAE+EFSGSA S SPPPSSVPLPKFSLRRKVV CNVE AGVDAGATDNLRRLLR
Subjt:  STMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR

Query:  LR
        LR
Subjt:  LR

A0A6J1GI76 uncharacterized protein LOC1114544344.0e-5262.02Show/hide
Query:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSH--RHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSA
        MEAVLI           P NFSPA           PAV +YSH  RH +QPP  PLPRR FPP    A+  CRPKG++ RD SL PKKSK IKR +    
Subjt:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSH--RHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSA

Query:  VKSTMEFVIVDSTNRLGPEPSHVPKDLWRVLGLR---SSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVE-AAGVDAGATDN
        V+ T E +IVDSTNR+GPEPSHVPKDL  VLGLR    S+PP EG++S G AAE+EFSGSAF+VSPPPSSVPLP F L RK ++CNVE AAG+DAGATDN
Subjt:  VKSTMEFVIVDSTNRLGPEPSHVPKDLWRVLGLR---SSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVE-AAGVDAGATDN

Query:  LRRLLRLR
        LRRLLRLR
Subjt:  LRRLLRLR

A0A6J1HFM4 uncharacterized protein LOC1114630193.1e-8180.2Show/hide
Query:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVK
        ME VLIPF A++SRS K +NF PATVH GLLN PPPAVP YSHR  QQPPLLPLPRRPFPP   GA   CRPKG KSRD SLTPKKSKPIKRS+GP A+K
Subjt:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVK

Query:  STMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR
        ST EF+IVDSTNRLGPEPSHVPKDLWRVLGLRSSAPP EG    G   E EFSGSAF VSPPPSSVPLPKF+LRR+ +SCNVEAAGVDAGATDNLRRLLR
Subjt:  STMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR

Query:  LR
        LR
Subjt:  LR

A0A6J1KEH8 uncharacterized protein LOC1114925081.1e-8381.19Show/hide
Query:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVK
        MEAVLIPF A++SRS K +NFSPATVH G+LN PPPAVP YSHRHHQQPPLLPLP RPFPP   G    CRPKG KSRD SLTPKKSKPIKRS+GP A+K
Subjt:  MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVK

Query:  STMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR
        ST EF+IVDSTNRLGPEPSHVPKDLWRVLGLRSSAPP EG    G + E EFSGSAF VSPPPSSVPLPKF+LRR+ VSCNVEAAGVDAGATDNLRRLLR
Subjt:  STMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR

Query:  LR
        LR
Subjt:  LR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20070.1 unknown protein5.9e-0859.09Show/hide
Query:  VSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLRLR
        +SPPPSS+P+P+FS++ K + CNVEAAG    AT+N+RR+L+LR
Subjt:  VSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLRLR

AT3G21570.1 unknown protein6.1e-0543.86Show/hide
Query:  TAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLRLR
        +A ++    S F+VSP PSS+PLP FS  +K     V    +D  A+ +LRRLLRL+
Subjt:  TAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLRLR

AT4G02040.1 unknown protein6.8e-0439.39Show/hide
Query:  VIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKF
        +IV +TNR+GPEP  + K +   LGL+S                  F+G+  S+SPPPS VP+P F
Subjt:  VIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCAGTCTTGATTCCATTTTATGCTGATCAATCTCGCAGTTTTAAACCCCAAAATTTCTCTCCGGCCACCGTCCACGGTGGTCTTCTCAACTTCCCTCCACCGGC
TGTCCCATATTACAGTCACCGCCACCATCAGCAACCGCCACTCCTCCCTTTGCCCCGCCGTCCGTTTCCCCCTCCGGAAACCGGAGCCAGGGCATTCTGCCGCCCAAAGG
GTATGAAATCCAGAGACCATTCTCTTACTCCAAAGAAATCAAAGCCAATTAAACGAAGTAAAGGGCCATCGGCGGTGAAATCGACGATGGAGTTCGTGATCGTTGATTCC
ACGAATCGACTGGGGCCGGAGCCGAGCCACGTTCCTAAAGATCTATGGAGAGTTTTAGGATTACGGTCATCGGCGCCGCCGTGCGAAGGTAACAAGAGTTCGGGGACGGC
GGCGGAGATGGAGTTTTCGGGGTCGGCGTTCAGCGTTTCGCCGCCGCCGAGTAGTGTTCCGCTTCCGAAATTCTCTCTGAGGCGGAAGGTGGTTAGTTGTAACGTGGAGG
CCGCCGGAGTAGACGCCGGAGCCACCGACAATCTCAGGCGACTTTTGCGCCTCCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCAGTCTTGATTCCATTTTATGCTGATCAATCTCGCAGTTTTAAACCCCAAAATTTCTCTCCGGCCACCGTCCACGGTGGTCTTCTCAACTTCCCTCCACCGGC
TGTCCCATATTACAGTCACCGCCACCATCAGCAACCGCCACTCCTCCCTTTGCCCCGCCGTCCGTTTCCCCCTCCGGAAACCGGAGCCAGGGCATTCTGCCGCCCAAAGG
GTATGAAATCCAGAGACCATTCTCTTACTCCAAAGAAATCAAAGCCAATTAAACGAAGTAAAGGGCCATCGGCGGTGAAATCGACGATGGAGTTCGTGATCGTTGATTCC
ACGAATCGACTGGGGCCGGAGCCGAGCCACGTTCCTAAAGATCTATGGAGAGTTTTAGGATTACGGTCATCGGCGCCGCCGTGCGAAGGTAACAAGAGTTCGGGGACGGC
GGCGGAGATGGAGTTTTCGGGGTCGGCGTTCAGCGTTTCGCCGCCGCCGAGTAGTGTTCCGCTTCCGAAATTCTCTCTGAGGCGGAAGGTGGTTAGTTGTAACGTGGAGG
CCGCCGGAGTAGACGCCGGAGCCACCGACAATCTCAGGCGACTTTTGCGCCTCCGATGA
Protein sequenceShow/hide protein sequence
MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVKSTMEFVIVDS
TNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLRLR