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Lsi08G013170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G013170
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransmembrane protein
Genome locationchr08:21529494..21529922
RNA-Seq ExpressionLsi08G013170
SyntenyLsi08G013170
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8057246.1 hypothetical protein FH972_013952 [Carpinus fangiana]5.1e-4056.34Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV
        MGW +RERRGPAWKQGW EQ L SI+PPP PLL I GI+V+LL +SSY++YKSQ+ +T INFK F   LPL+ +FV + I +YGR+VI+ P TK++ V+ 
Subjt:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV

Query:  AEGGSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPYYY
        A+     PWG   LL++L++++SYQ +FHSKW+P IW   YY
Subjt:  AEGGSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPYYY

KAG6598502.1 hypothetical protein SDJN03_08280, partial [Cucurbita argyrosperma subsp. sororia]8.0e-6287.32Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWAEQA+ SITPPP+PLLAILGILVILLSVSS+SS++SQVK TRINFKLFFL LPLVFVFVGNSIVRYGR+VIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV

Query:  AEGGSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPYYY
         +  +ASP G A LLVVLLVLISYQP+FHSKWFPAIWRPYYY
Subjt:  AEGGSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPYYY

KAG7020455.1 hypothetical protein SDJN02_17139, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-6789.44Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV
        MGWLIRERRGP+WKQGWAEQAL SI PPPRPLLA+LGILVILLSVSSYSSY+SQVK+T++NFK+FFL LPLVFVFVGNSIVRYGR+VIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV

Query:  AEGGSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPYYY
        AEG +ASPWGAAALLVVLLVLISYQP+FHSKWFP+IWRPYYY
Subjt:  AEGGSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPYYY

KAG7029438.1 hypothetical protein SDJN02_07777, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-6085.92Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWAEQA+ SITPPP+PLLAILGILVILLSVSS+S+++SQVK T INFKLFFL LPLVFVFVGNSIVRYGR+VIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV

Query:  AEGGSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPYYY
         +  +ASP G A LLVVLLVLISYQP+FHSKWFPAIWRPYYY
Subjt:  AEGGSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPYYY

XP_031737284.1 uncharacterized protein LOC116402215 [Cucumis sativus]1.3e-6793.01Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWAEQAL+SITPPPRPLLAILGILVILLSVSSYSSY+SQVKKTRINFKLFFL LPLVFVFVGNSIVRYGR+VIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV

Query:  AEG-GSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPYYY
         EG  SASPWGAA LLVVLLVL+SYQP+FHSKWFPAIWRPYYY
Subjt:  AEG-GSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPYYY

TrEMBL top hitse value%identityAlignment
A0A0A0LNS9 Uncharacterized protein6.2e-6893.01Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWAEQAL+SITPPPRPLLAILGILVILLSVSSYSSY+SQVKKTRINFKLFFL LPLVFVFVGNSIVRYGR+VIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV

Query:  AEG-GSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPYYY
         EG  SASPWGAA LLVVLLVL+SYQP+FHSKWFPAIWRPYYY
Subjt:  AEG-GSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPYYY

A0A2P5DBR5 Transmembrane protein1.2e-3955.71Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV
        MGW +RE    +WK GW E+ L S++ PP PL+A++GI+V+LLS+SSY++YKSQV+KT I FKLF LFLPL+ +F+ NS+ +YG + II+P TK EP   
Subjt:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV

Query:  AEGGSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPY
        ++GG  SPWG A LL++L+VLISY+ +FHSKW+P +W  Y
Subjt:  AEGGSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPY

A0A2P5F7W0 Transmembrane protein1.2e-3956.43Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV
        MGW +RE    +WK GW E+ L S++ PP PL+AI+GI+V+LLS+SSY++YKSQV++T I FKLF LFLPL+ +F+ NS+ +YG V II+PRTK EP   
Subjt:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV

Query:  AEGGSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPY
        ++GG  SPWG A LL++L+VLISY+ +FHSKW+  +W  Y
Subjt:  AEGGSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPY

A0A5A7VAG3 Uncharacterized protein6.2e-6893.01Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWAEQAL+SITPPPRPLLAILGILVILLSVSSYSSY+SQVKKTRINFKLFFL LPLVFVFVGNSIVRYGR+VIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV

Query:  AEG-GSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPYYY
         EG  SASPWGAA LLVVLLVL+SYQP+FHSKWFPAIWRPYYY
Subjt:  AEG-GSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPYYY

A0A5N6R8L3 Uncharacterized protein2.4e-4056.34Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV
        MGW +RERRGPAWKQGW EQ L SI+PPP PLL I GI+V+LL +SSY++YKSQ+ +T INFK F   LPL+ +FV + I +YGR+VI+ P TK++ V+ 
Subjt:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYV

Query:  AEGGSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPYYY
        A+     PWG   LL++L++++SYQ +FHSKW+P IW   YY
Subjt:  AEGGSASPWGAAALLVVLLVLISYQPFFHSKWFPAIWRPYYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein4.6e-0733.04Show/hide
Query:  SITPPPRPLLAILGILVILLSVSSYSSYK--SQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYVAEG----GSASPWGAAALLVV
        S++P P P+L IL +  + L  S Y S +  ++  + +INF L  + L L+ +    S +     ++    +     YV+ G    G +SPWG AAL+V+
Subjt:  SITPPPRPLLAILGILVILLSVSSYSSYK--SQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYVAEG----GSASPWGAAALLVV

Query:  LLVLISYQPFFHSKW
        LLVL+ YQ  F   W
Subjt:  LLVLISYQPFFHSKW

AT2G31940.1 unknown protein4.6e-0730.97Show/hide
Query:  PPRPLLAILGILVILL--SVSSYSSYKSQVKKTRINFKLFFLFLPLVFV----FVGNSIVRYGRVVIITPRTKLEPVYVAEGGSASPWGAAALLVVLLVL
        PP PL   + +L++L+  ++S Y+SY+  ++     FKL  +  PL+ +    F+ +     G +  +    + E +Y A G   +PWG A +LV L  +
Subjt:  PPRPLLAILGILVILL--SVSSYSSYKSQVKKTRINFKLFFLFLPLVFV----FVGNSIVRYGRVVIITPRTKLEPVYVAEGGSASPWGAAALLVVLLVL

Query:  ISYQPFFHSKWFP
        +SYQ  F  +WFP
Subjt:  ISYQPFFHSKWFP

AT5G19875.1 unknown protein4.2e-0833.64Show/hide
Query:  PRPLLAILGILV-ILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYVAEGGSASPWGAAALLVVLLVLISYQPF
        P P L  L I+V  +LS + Y +++S ++ T  + KL F+F PL  + + +     G +    P  + + ++ A    +SPWG AA+LV++L ++SYQ  
Subjt:  PRPLLAILGILV-ILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYVAEGGSASPWGAAALLVVLLVLISYQPF

Query:  FHSKWFP
        F  +WFP
Subjt:  FHSKWFP

AT5G42146.1 unknown protein1.2e-2645.26Show/hide
Query:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVI---ITPRTKLEP
        MGW I+ERRG +WK+GW E+ L + + PP  LLA+L I+ +LL +SSY  YK +V+KT  N KLF LFLP++FVFV  S+    R++     + R     
Subjt:  MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVI---ITPRTKLEP

Query:  VYVAEGGSASPWGAAALLVVLLVLISYQPFFHSKWFP
            EG    PWG   +L++LL+L+S Q +FHS W+P
Subjt:  VYVAEGGSASPWGAAALLVVLLVLISYQPFFHSKWFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGTTGATAAGAGAAAGAAGAGGGCCAGCATGGAAACAAGGATGGGCAGAACAGGCCTTAACCTCCATAACTCCACCACCAAGGCCACTCCTTGCCATACTTGG
AATCTTGGTCATTCTGCTATCTGTTTCATCATATTCAAGCTACAAATCCCAGGTGAAGAAAACAAGGATCAACTTTAAGCTATTTTTCTTGTTTTTACCTCTAGTATTTG
TCTTTGTTGGCAACTCCATTGTTAGATATGGTCGTGTTGTAATTATCACTCCGAGAACAAAGCTCGAACCGGTTTACGTTGCAGAAGGCGGTTCTGCTTCGCCTTGGGGA
GCGGCGGCTTTGCTGGTGGTGTTGTTGGTCTTGATATCTTATCAGCCGTTCTTCCACTCTAAGTGGTTTCCAGCAATATGGAGACCATATTATTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGTTGATAAGAGAAAGAAGAGGGCCAGCATGGAAACAAGGATGGGCAGAACAGGCCTTAACCTCCATAACTCCACCACCAAGGCCACTCCTTGCCATACTTGG
AATCTTGGTCATTCTGCTATCTGTTTCATCATATTCAAGCTACAAATCCCAGGTGAAGAAAACAAGGATCAACTTTAAGCTATTTTTCTTGTTTTTACCTCTAGTATTTG
TCTTTGTTGGCAACTCCATTGTTAGATATGGTCGTGTTGTAATTATCACTCCGAGAACAAAGCTCGAACCGGTTTACGTTGCAGAAGGCGGTTCTGCTTCGCCTTGGGGA
GCGGCGGCTTTGCTGGTGGTGTTGTTGGTCTTGATATCTTATCAGCCGTTCTTCCACTCTAAGTGGTTTCCAGCAATATGGAGACCATATTATTATTAG
Protein sequenceShow/hide protein sequence
MGWLIRERRGPAWKQGWAEQALTSITPPPRPLLAILGILVILLSVSSYSSYKSQVKKTRINFKLFFLFLPLVFVFVGNSIVRYGRVVIITPRTKLEPVYVAEGGSASPWG
AAALLVVLLVLISYQPFFHSKWFPAIWRPYYY