; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G013790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G013790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:22080778..22081617
RNA-Seq ExpressionLsi08G013790
SyntenyLsi08G013790
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065217.1 uncharacterized protein E6C27_scaffold82G005550 [Cucumis melo var. makuwa]3.3e-8370Show/hide
Query:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAE
        MVLNGFDSVKALK I+IGNYSRRRKLKWLFEFFVFLFLVS RSS  SLAGP+L HFFQR+L +LNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNR +  
Subjt:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAE

Query:  SGRDGDSAESLVA-PIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVRHLNAAME
             DS+ESLVA P+D SV E     E  PVI DSI E                        A AEET TELVI AV++TA  P  P+SPVRHLNA ME
Subjt:  SGRDGDSAESLVA-PIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVRHLNAAME

Query:  TAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVSG
         AEI+PE KRYRRTESERFEENRE SKFRRSKTEI  R +  E+T F + VDE+DIDDFNRTVESFIAEQKMHIGGRVSG
Subjt:  TAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVSG

KAG6585580.1 hypothetical protein SDJN03_18313, partial [Cucurbita argyrosperma subsp. sororia]3.2e-6257.34Show/hide
Query:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAE
        MVLNGFDSVKA   I++ N  RRRKLKWLFEF +FLFLV  RSSL SLAGP  RHFF+R+LV+LNSH FVF+VFHAMLFVVYSLSHLTDN SGSNR DAE
Subjt:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAE

Query:  SGRDG--------DSAESLVAPIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVR
        S  D         DS ESL+A  DDSV + LVV E         T  + E     +  + AE+ T +  ++      T         T TAP  P SPV 
Subjt:  SGRDG--------DSAESLVAPIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVR

Query:  HLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVS
        HL        I+PET++YRRTESERFEENR+ +K RRSKTEI RRE   E T+  +SV+E+DIDDFNR VE FIAEQK+HIGGR+S
Subjt:  HLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVS

KAG7020495.1 hypothetical protein SDJN02_17180, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-6256.64Show/hide
Query:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAE
        MVLNGFDSVKA   I++ N  RRRKLKWLFEF +FLFLV  RSSL SLAGP  RHFF+R+LV+LNSH FVF++FHAMLFVVYSLSH TDN SGSNR DAE
Subjt:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAE

Query:  SGRDG--------DSAESLVAPIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVR
        S  D         DS ESL+A  DDSV + LVV E         T  + E     +  + AE+ T +         + + +      T TAP  P SPV 
Subjt:  SGRDG--------DSAESLVAPIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVR

Query:  HLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVS
        HL        I+PET++YRRTESERFEENRE +K RRSKTEI RRE   E T+  +SV+E+DIDDFNR VE FIAEQK+HIGGR+S
Subjt:  HLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVS

XP_011650191.1 uncharacterized protein LOC105434756 [Cucumis sativus]4.1e-7866.43Show/hide
Query:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAE
        MVLNGFDSVKALK I+IGNY RR KLKWLFEFFVFLFLVS RSS  SLAGP+L  FFQR+LV+LNSHIFVFMVFHAMLF+VYSLSHLTDNKSGSN  +  
Subjt:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAE

Query:  SGRDGDSAESLVA-PIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVRHLNAAME
             DS+ESLVA P+D SV E     E  PVI DSI EP AE+             TTE+VI AA++TA               L+P+ PV+HLNA ME
Subjt:  SGRDGDSAESLVA-PIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVRHLNAAME

Query:  TAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVSG
         AEI+ E KRYRRTESERFEEN+E  KFRR KTEI  RES  E+T F   VDE+DIDDFNRTVESFIAEQKMHIGGRVSG
Subjt:  TAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVSG

XP_023002474.1 uncharacterized protein LOC111496300 [Cucurbita maxima]1.3e-6054.55Show/hide
Query:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAE
        MVLNGFDSVKA   I++ N  RRRKLKWLFEF +FLFLV  RSSL SLAGP  RHFF+R+LV+LNSH FVF+VFHAMLFVVYSLSHLTDN SGSNR + E
Subjt:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAE

Query:  SGRDG--------DSAESLVAPIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVR
        S  D         +S ES++A  DDSV + LVV +      +++  P         V  +  E+ TE    + +         +++ T T    P SPV 
Subjt:  SGRDG--------DSAESLVAPIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVR

Query:  HLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVS
        HL        I+PET++YRRTESERFE+NRE +K RRSKTEI RRE   E  + ++SV+E+DIDDFNR VESFIAEQK+HIGGR+S
Subjt:  HLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVS

TrEMBL top hitse value%identityAlignment
A0A0A0LNN4 Uncharacterized protein2.0e-7866.43Show/hide
Query:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAE
        MVLNGFDSVKALK I+IGNY RR KLKWLFEFFVFLFLVS RSS  SLAGP+L  FFQR+LV+LNSHIFVFMVFHAMLF+VYSLSHLTDNKSGSN  +  
Subjt:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAE

Query:  SGRDGDSAESLVA-PIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVRHLNAAME
             DS+ESLVA P+D SV E     E  PVI DSI EP AE+             TTE+VI AA++TA               L+P+ PV+HLNA ME
Subjt:  SGRDGDSAESLVA-PIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVRHLNAAME

Query:  TAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVSG
         AEI+ E KRYRRTESERFEEN+E  KFRR KTEI  RES  E+T F   VDE+DIDDFNRTVESFIAEQKMHIGGRVSG
Subjt:  TAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVSG

A0A5A7VDR7 Uncharacterized protein1.6e-8370Show/hide
Query:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAE
        MVLNGFDSVKALK I+IGNYSRRRKLKWLFEFFVFLFLVS RSS  SLAGP+L HFFQR+L +LNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNR +  
Subjt:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAE

Query:  SGRDGDSAESLVA-PIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVRHLNAAME
             DS+ESLVA P+D SV E     E  PVI DSI E                        A AEET TELVI AV++TA  P  P+SPVRHLNA ME
Subjt:  SGRDGDSAESLVA-PIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVRHLNAAME

Query:  TAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVSG
         AEI+PE KRYRRTESERFEENRE SKFRRSKTEI  R +  E+T F + VDE+DIDDFNRTVESFIAEQKMHIGGRVSG
Subjt:  TAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVSG

A0A6J1CSG5 uncharacterized protein LOC1110139086.0e-5955.59Show/hide
Query:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDA-
        MVLNGFDSVKA   I +GN++RRRKLKWLFE  VFLFL+SRRS+  S A PVLRHFF++L+ +LNSHIFVFM F+ MLFVVYSLS LT+ K  SNR DA 
Subjt:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDA-

Query:  --ESGRDGDSAESLVAPIDDSVAEILVVRE----TTPVIGDSI-TEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVR
               G+S ESLVAP DDS+AEILVV E    T+PV G +I   P+AE  T ++                                +  P+ PA    
Subjt:  --ESGRDGDSAESLVAPIDDSVAEILVVRE----TTPVIGDSI-TEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVR

Query:  HLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVS
         +  A E  EI+PETK+YRRTESERF E RE +KFRRSKTEI RRES  E  RF  SV E+DI+DFNRTVESFIAEQK+HIG  +S
Subjt:  HLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVS

A0A6J1KQJ8 uncharacterized protein LOC1114963006.5e-6154.55Show/hide
Query:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAE
        MVLNGFDSVKA   I++ N  RRRKLKWLFEF +FLFLV  RSSL SLAGP  RHFF+R+LV+LNSH FVF+VFHAMLFVVYSLSHLTDN SGSNR + E
Subjt:  MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAE

Query:  SGRDG--------DSAESLVAPIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVR
        S  D         +S ES++A  DDSV + LVV +      +++  P         V  +  E+ TE    + +         +++ T T    P SPV 
Subjt:  SGRDG--------DSAESLVAPIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVR

Query:  HLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVS
        HL        I+PET++YRRTESERFE+NRE +K RRSKTEI RRE   E  + ++SV+E+DIDDFNR VESFIAEQK+HIGGR+S
Subjt:  HLNAAMETAEIVPETKRYRRTESERFEENREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVS

W9SC28 Uncharacterized protein5.2e-1032.48Show/hide
Query:  DSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSL-VSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLS---HLTDNKSGSNRPDAESG
        D+VKA KD+AI    R RK KW  E    LFL++  S+  + +AG       + ++ +  SH+FVF +F+A++  VY+LS   H++ N +GS +PD    
Subjt:  DSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSL-VSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLS---HLTDNKSGSNRPDAESG

Query:  RDGDSAESLVAPIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASP-VRHLNAAMETA
                     D+ V     VR   P + DS   P  E          AEE+T     A A           VE    A   P  P V   +      
Subjt:  RDGDSAESLVAPIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASP-VRHLNAAMETA

Query:  EIVPETKRYRRTESERFEENR---EMSKFRRSKTEISRR--ESGGEMTRFSNSVDELDIDDFNRTVESFIAEQK
         +V   K Y RT+S RFE  R      +FRRS T++ R+    G E  + S  V++L  ++FNRT+E+FIA QK
Subjt:  EIVPETKRYRRTESERFEENR---EMSKFRRSKTEISRR--ESGGEMTRFSNSVDELDIDDFNRTVESFIAEQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTCAATGGATTCGATTCCGTCAAGGCGTTGAAGGACATTGCCATCGGGAATTACAGCCGCCGCCGGAAGCTCAAGTGGTTATTCGAGTTTTTTGTGTTCTTGTT
CCTCGTTTCCCGCCGGTCCAGCTTGGTTTCTCTCGCCGGTCCGGTCCTCCGCCATTTTTTCCAGCGACTCCTCGTCATCCTCAACAGTCACATCTTCGTCTTCATGGTTT
TCCACGCCATGCTCTTCGTCGTTTACTCTCTCTCCCATTTGACCGACAACAAATCCGGTTCGAACCGGCCCGACGCCGAGTCCGGACGCGACGGCGATTCGGCGGAGAGT
TTGGTGGCTCCGATTGACGATTCCGTCGCCGAGATATTAGTTGTCAGGGAGACAACGCCGGTGATCGGAGACTCAATCACTGAACCTTCGGCGGAGAAGAAGACGACGGA
GCTGGTTGTCGCTACGGCGGAGGAGAGGACGACGGAACTGGTTATCGCTGCGGCGGAGGAGACGGCAACGGAACTGGTTATCGCTGCGGTGGAGGAGACGGCGACGGCGC
CGTTAGCTCCGGCCTCTCCAGTCCGGCATTTGAACGCCGCGATGGAAACGGCGGAGATCGTACCGGAGACAAAACGCTATCGGAGGACGGAATCGGAGAGATTTGAAGAG
AATCGGGAAATGAGCAAGTTCCGGCGATCGAAGACAGAGATTAGCCGGAGGGAAAGCGGCGGAGAAATGACGAGATTTTCTAATTCAGTGGACGAGTTGGACATCGACGA
TTTCAATCGGACGGTGGAGAGCTTCATAGCGGAACAGAAAATGCACATCGGCGGAAGGGTGTCCGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTCAATGGATTCGATTCCGTCAAGGCGTTGAAGGACATTGCCATCGGGAATTACAGCCGCCGCCGGAAGCTCAAGTGGTTATTCGAGTTTTTTGTGTTCTTGTT
CCTCGTTTCCCGCCGGTCCAGCTTGGTTTCTCTCGCCGGTCCGGTCCTCCGCCATTTTTTCCAGCGACTCCTCGTCATCCTCAACAGTCACATCTTCGTCTTCATGGTTT
TCCACGCCATGCTCTTCGTCGTTTACTCTCTCTCCCATTTGACCGACAACAAATCCGGTTCGAACCGGCCCGACGCCGAGTCCGGACGCGACGGCGATTCGGCGGAGAGT
TTGGTGGCTCCGATTGACGATTCCGTCGCCGAGATATTAGTTGTCAGGGAGACAACGCCGGTGATCGGAGACTCAATCACTGAACCTTCGGCGGAGAAGAAGACGACGGA
GCTGGTTGTCGCTACGGCGGAGGAGAGGACGACGGAACTGGTTATCGCTGCGGCGGAGGAGACGGCAACGGAACTGGTTATCGCTGCGGTGGAGGAGACGGCGACGGCGC
CGTTAGCTCCGGCCTCTCCAGTCCGGCATTTGAACGCCGCGATGGAAACGGCGGAGATCGTACCGGAGACAAAACGCTATCGGAGGACGGAATCGGAGAGATTTGAAGAG
AATCGGGAAATGAGCAAGTTCCGGCGATCGAAGACAGAGATTAGCCGGAGGGAAAGCGGCGGAGAAATGACGAGATTTTCTAATTCAGTGGACGAGTTGGACATCGACGA
TTTCAATCGGACGGTGGAGAGCTTCATAGCGGAACAGAAAATGCACATCGGCGGAAGGGTGTCCGGCTAA
Protein sequenceShow/hide protein sequence
MVLNGFDSVKALKDIAIGNYSRRRKLKWLFEFFVFLFLVSRRSSLVSLAGPVLRHFFQRLLVILNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRPDAESGRDGDSAES
LVAPIDDSVAEILVVRETTPVIGDSITEPSAEKKTTELVVATAEERTTELVIAAAEETATELVIAAVEETATAPLAPASPVRHLNAAMETAEIVPETKRYRRTESERFEE
NREMSKFRRSKTEISRRESGGEMTRFSNSVDELDIDDFNRTVESFIAEQKMHIGGRVSG