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Lsi08G013880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G013880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmyrosinase-binding protein 2-like
Genome locationchr08:22155910..22156851
RNA-Seq ExpressionLsi08G013880
SyntenyLsi08G013880
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008444727.1 PREDICTED: uncharacterized protein LOC103487977 [Cucumis melo]1.5e-4282.64Show/hide
Query:  MTPRAYVLIFFFWSLLTILTPALVFLSENSKP----FESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR
        MTPRAYVLIFFFWSLLTILTPALVFLSENSKP    FESTDG+NG IEMSRKVVGLTRKYQMLK+LAEEQ AP  IPTPITAPAP+PAPA +P  AVP+ 
Subjt:  MTPRAYVLIFFFWSLLTILTPALVFLSENSKP----FESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR

Query:  RFMADAGKIILTTLKGLKEAH
        RFMA+A K+IL+TLKGLKEAH
Subjt:  RFMADAGKIILTTLKGLKEAH

XP_011649628.1 uncharacterized protein LOC105434646 [Cucumis sativus]3.8e-4182.5Show/hide
Query:  MTPRAYVLIFFFWSLLTILTPALVFLSENSKP----FESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR
        MTPRAYVLIFFFWSLLTILTPALVFLSENSKP    FESTDGKNG IEMSRKVVGLTRKYQMLK+LAEEQ AP  IPTPITAPAP+P PAP+     P+R
Subjt:  MTPRAYVLIFFFWSLLTILTPALVFLSENSKP----FESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR

Query:  RFMADAGKIILTTLKGLKEA
        RFMADAG++IL TLKGLKEA
Subjt:  RFMADAGKIILTTLKGLKEA

XP_022144206.1 uncharacterized protein LOC111013954 [Momordica charantia]3.9e-3876.67Show/hide
Query:  MTPRAYVLIFFFWSLLTILTPALVFLSENSK----PFESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR
        MTPRAYVLIFFFWS LTILTPALV LSENSK     F+S DGKNG I MSRKVVGLTRKY+MLKVLAEEQ AP AIP P+T P P+P+PAP+P A  P+R
Subjt:  MTPRAYVLIFFFWSLLTILTPALVFLSENSK----PFESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR

Query:  RFMADAGKIILTTLKGLKEA
        RFMA AGK+ILTTLK LKEA
Subjt:  RFMADAGKIILTTLKGLKEA

XP_023002554.1 uncharacterized protein LOC111496365 [Cucurbita maxima]4.3e-3778.63Show/hide
Query:  MTPRAYVLIFFFWSLLTILTPALVFLSENSK----PFESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR
        MTPRAYVLIFFFWSLLTILTPALVFLSENSK      +S DGK G I+MSRK+VGLTRKY+MLKVL EEQ++PAAIPTPITAPAPAP+ A  P  AVPLR
Subjt:  MTPRAYVLIFFFWSLLTILTPALVFLSENSK----PFESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR

Query:  RFMADAGKIILTTLKGL
        RFMA AGK+I+TTLKGL
Subjt:  RFMADAGKIILTTLKGL

XP_038885597.1 uncharacterized protein LOC120075920 [Benincasa hispida]7.6e-4284.3Show/hide
Query:  MTPRAYVLIFFFWSLLTILTPALVFLSENSKP----FESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR
        MTPRAYVLIFFFWSLLTILTPALVFLS+NSKP    F+STDGKNG IEMSRKVVGLTRKYQMLKVLAEEQ+APAAIPTPITAPA +PAPA    AAV +R
Subjt:  MTPRAYVLIFFFWSLLTILTPALVFLSENSKP----FESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR

Query:  RFMADAGKIILTTLKGLKEAH
        +FMAD GK+ILTTLKGLKEAH
Subjt:  RFMADAGKIILTTLKGLKEAH

TrEMBL top hitse value%identityAlignment
A0A0A0LNM8 Uncharacterized protein1.8e-4182.5Show/hide
Query:  MTPRAYVLIFFFWSLLTILTPALVFLSENSKP----FESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR
        MTPRAYVLIFFFWSLLTILTPALVFLSENSKP    FESTDGKNG IEMSRKVVGLTRKYQMLK+LAEEQ AP  IPTPITAPAP+P PAP+     P+R
Subjt:  MTPRAYVLIFFFWSLLTILTPALVFLSENSKP----FESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR

Query:  RFMADAGKIILTTLKGLKEA
        RFMADAG++IL TLKGLKEA
Subjt:  RFMADAGKIILTTLKGLKEA

A0A1S3BAZ8 uncharacterized protein LOC1034879777.4e-4382.64Show/hide
Query:  MTPRAYVLIFFFWSLLTILTPALVFLSENSKP----FESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR
        MTPRAYVLIFFFWSLLTILTPALVFLSENSKP    FESTDG+NG IEMSRKVVGLTRKYQMLK+LAEEQ AP  IPTPITAPAP+PAPA +P  AVP+ 
Subjt:  MTPRAYVLIFFFWSLLTILTPALVFLSENSKP----FESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR

Query:  RFMADAGKIILTTLKGLKEAH
        RFMA+A K+IL+TLKGLKEAH
Subjt:  RFMADAGKIILTTLKGLKEAH

A0A5A7VFX0 Uncharacterized protein7.4e-4382.64Show/hide
Query:  MTPRAYVLIFFFWSLLTILTPALVFLSENSKP----FESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR
        MTPRAYVLIFFFWSLLTILTPALVFLSENSKP    FESTDG+NG IEMSRKVVGLTRKYQMLK+LAEEQ AP  IPTPITAPAP+PAPA +P  AVP+ 
Subjt:  MTPRAYVLIFFFWSLLTILTPALVFLSENSKP----FESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR

Query:  RFMADAGKIILTTLKGLKEAH
        RFMA+A K+IL+TLKGLKEAH
Subjt:  RFMADAGKIILTTLKGLKEAH

A0A6J1CSM4 uncharacterized protein LOC1110139541.9e-3876.67Show/hide
Query:  MTPRAYVLIFFFWSLLTILTPALVFLSENSK----PFESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR
        MTPRAYVLIFFFWS LTILTPALV LSENSK     F+S DGKNG I MSRKVVGLTRKY+MLKVLAEEQ AP AIP P+T P P+P+PAP+P A  P+R
Subjt:  MTPRAYVLIFFFWSLLTILTPALVFLSENSK----PFESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR

Query:  RFMADAGKIILTTLKGLKEA
        RFMA AGK+ILTTLK LKEA
Subjt:  RFMADAGKIILTTLKGLKEA

A0A6J1KQS2 uncharacterized protein LOC1114963652.1e-3778.63Show/hide
Query:  MTPRAYVLIFFFWSLLTILTPALVFLSENSK----PFESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR
        MTPRAYVLIFFFWSLLTILTPALVFLSENSK      +S DGK G I+MSRK+VGLTRKY+MLKVL EEQ++PAAIPTPITAPAPAP+ A  P  AVPLR
Subjt:  MTPRAYVLIFFFWSLLTILTPALVFLSENSK----PFESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLR

Query:  RFMADAGKIILTTLKGL
        RFMA AGK+I+TTLKGL
Subjt:  RFMADAGKIILTTLKGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G42785.1 unknown protein8.7e-0432.14Show/hide
Query:  MTPRAYVLIFFFWSLLTILTPALVFLSENSK---PFESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAP
        M  RAYV+IFFFW+LLTI+TP LV  S++ K   P  +   +  +    R+++G + +  + +           +  P  AP P
Subjt:  MTPRAYVLIFFFWSLLTILTPALVFLSENSK---PFESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCCTCGAGCTTATGTCTTAATCTTCTTCTTCTGGTCTCTCCTCACCATCCTCACTCCCGCTCTCGTTTTTCTCTCCGAGAATTCTAAACCATTCGAATCTACAGA
TGGGAAAAATGGAAGAATTGAAATGAGTAGAAAAGTTGTGGGATTGACGAGAAAATATCAGATGTTGAAAGTTTTGGCTGAAGAACAGAGTGCACCGGCAGCAATTCCGA
CTCCCATTACAGCACCGGCGCCGGCGCCGGCACCAGCTCCGTCTCCGAGCGCCGCCGTTCCTTTAAGGAGGTTCATGGCCGATGCTGGAAAAATCATATTGACAACATTG
AAGGGCTTGAAAGAAGCACATTAA
mRNA sequenceShow/hide mRNA sequence
TAATACAATTAGGGATTTCCATTGTCACTACTAACTCTAAAATACCTTTGCCTTTGGCTTTAAAACAAAAGATATTCCCTTAAGCTGCTGTTCTCTGCATTCTCCCAACA
ACAAATGACCCCTCGAGCTTATGTCTTAATCTTCTTCTTCTGGTCTCTCCTCACCATCCTCACTCCCGCTCTCGTTTTTCTCTCCGAGAATTCTAAACCATTCGAATCTA
CAGATGGGAAAAATGGAAGAATTGAAATGAGTAGAAAAGTTGTGGGATTGACGAGAAAATATCAGATGTTGAAAGTTTTGGCTGAAGAACAGAGTGCACCGGCAGCAATT
CCGACTCCCATTACAGCACCGGCGCCGGCGCCGGCACCAGCTCCGTCTCCGAGCGCCGCCGTTCCTTTAAGGAGGTTCATGGCCGATGCTGGAAAAATCATATTGACAAC
ATTGAAGGGCTTGAAAGAAGCACATTAATTGAAGGGTAGGAAATAATAAAATTCATCTCGGAATATTGTATTATTTTTAAATAAAAATCACATATTGTTTGTTGCAAAAT
AAAAATTATTTTCATCCTCTTGGT
Protein sequenceShow/hide protein sequence
MTPRAYVLIFFFWSLLTILTPALVFLSENSKPFESTDGKNGRIEMSRKVVGLTRKYQMLKVLAEEQSAPAAIPTPITAPAPAPAPAPSPSAAVPLRRFMADAGKIILTTL
KGLKEAH