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Lsi08G013890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G013890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein RER1
Genome locationchr08:22158902..22161297
RNA-Seq ExpressionLsi08G013890
SyntenyLsi08G013890
Gene Ontology termsGO:0006621 - protein retention in ER lumen (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR004932 - Retrieval of early ER protein Rer1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585592.1 Protein RER1B, partial [Cucurbita argyrosperma subsp. sororia]8.3e-5797.41Show/hide
Query:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
        MEGVE DAASAVAPLAKWRNDFARAFQYYLDRSTPHPV RWLGTL+VAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
Subjt:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG

Query:  SDEFRPFIRRLPEFKF
        SDEFRPFIRRLPEFKF
Subjt:  SDEFRPFIRRLPEFKF

XP_022144203.1 protein RER1B-like [Momordica charantia]6.3e-5798.28Show/hide
Query:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
        MEGV  DAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
Subjt:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG

Query:  SDEFRPFIRRLPEFKF
        SDEFRPFIRRLPEFKF
Subjt:  SDEFRPFIRRLPEFKF

XP_023002506.1 protein RER1B-like [Cucurbita maxima]2.2e-5798.28Show/hide
Query:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
        MEGVE DAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTL+VAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
Subjt:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG

Query:  SDEFRPFIRRLPEFKF
        SDEFRPFIRRLPEFKF
Subjt:  SDEFRPFIRRLPEFKF

XP_023547095.1 protein RER1B-like [Cucurbita pepo subsp. pepo]1.8e-5697.41Show/hide
Query:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
        MEGV  DAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVL+GASLPTKG
Subjt:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG

Query:  SDEFRPFIRRLPEFKF
        SDEFRPFIRRLPEFKF
Subjt:  SDEFRPFIRRLPEFKF

XP_038885596.1 protein RER1B-like [Benincasa hispida]6.3e-5798.28Show/hide
Query:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
        MEGV  DAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
Subjt:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG

Query:  SDEFRPFIRRLPEFKF
        SDEFRPFIRRLPEFKF
Subjt:  SDEFRPFIRRLPEFKF

TrEMBL top hitse value%identityAlignment
A0A1S3BBV8 Protein RER12.0e-5696.55Show/hide
Query:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
        MEGV  D ASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
Subjt:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG

Query:  SDEFRPFIRRLPEFKF
        SDEF+PFIRRLPEFKF
Subjt:  SDEFRPFIRRLPEFKF

A0A5A7VDS6 Protein RER1B-like2.0e-5696.55Show/hide
Query:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
        MEGV  D ASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
Subjt:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG

Query:  SDEFRPFIRRLPEFKF
        SDEF+PFIRRLPEFKF
Subjt:  SDEFRPFIRRLPEFKF

A0A6J1CRM0 Protein RER13.1e-5798.28Show/hide
Query:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
        MEGV  DAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
Subjt:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG

Query:  SDEFRPFIRRLPEFKF
        SDEFRPFIRRLPEFKF
Subjt:  SDEFRPFIRRLPEFKF

A0A6J1HDF6 Protein RER18.9e-5797.41Show/hide
Query:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
        MEGV  DAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVL+GASLPTKG
Subjt:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG

Query:  SDEFRPFIRRLPEFKF
        SDEFRPFIRRLPEFKF
Subjt:  SDEFRPFIRRLPEFKF

A0A6J1KLH6 Protein RER11.1e-5798.28Show/hide
Query:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
        MEGVE DAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTL+VAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
Subjt:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG

Query:  SDEFRPFIRRLPEFKF
        SDEFRPFIRRLPEFKF
Subjt:  SDEFRPFIRRLPEFKF

SwissProt top hitse value%identityAlignment
A5PJ65 Protein RER13.5e-2663.44Show/hide
Query:  FQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPEL--DVLDGASLPTKGSDEFRPFIRRLPEFKF
        +Q +LD+STPH   RW+ TL ++ IY++RV+ +QG+Y+V+Y LGIY LNL I FLSPKVDP L  D  DG SLPTK ++EFRPFIRRLPEFKF
Subjt:  FQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPEL--DVLDGASLPTKGSDEFRPFIRRLPEFKF

O48670 Protein RER1A6.4e-3661.54Show/hide
Query:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPEL-DVLDGASLPTK
        M+    D+ S   P+ +  ++  R +Q+YLD++TPH   RW+GTL+VA IY LRV+Y+QGFY+++YGLGIY+LNLLIGFLSP VDPE   V DG SLPT+
Subjt:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPEL-DVLDGASLPTK

Query:  GSDEFRPFIRRLPEFKF
        GSDEF+PFIRRLPEFKF
Subjt:  GSDEFRPFIRRLPEFKF

O48671 Protein RER1B1.8e-3863.79Show/hide
Query:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
        MEG   D+ S   P+ K  ++  R +QYYLD++TPH   RW+GTL+   IY LRV+ + GFY++SYGLGIY+LNLLIGFLSP VDPEL+V DGA+LPT+G
Subjt:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG

Query:  SDEFRPFIRRLPEFKF
        SDEF+PFIRRLPEFKF
Subjt:  SDEFRPFIRRLPEFKF

Q9ZPV7 Protein RER1D8.4e-3664.35Show/hide
Query:  GVESDAASAVA-PLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGS
        G E++A + VA PLAKWR +F+++FQ YLDRS P+ V+RWL TL+ A IY+ RV+ V G++V+SYGL  YILNLLIGFLSPKVDPEL+ LD  SLP   S
Subjt:  GVESDAASAVA-PLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGS

Query:  DEFRPFIRRLPEFKF
        DE++PF+RRLPEFKF
Subjt:  DEFRPFIRRLPEFKF

Q9ZWI7 Protein RER1C2.9e-2849.55Show/hide
Query:  SDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFR
        SD++S    + +  + F++  Q+ LD++ PH + RW+  L V  IY++RV++V+GFY+++Y +GIY+LNL+I FLSP+ DPE  +  G SLPT+ SDE+R
Subjt:  SDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFR

Query:  PFIRRLPEFKF
        PF+RRLPEFKF
Subjt:  PFIRRLPEFKF

Arabidopsis top hitse value%identityAlignment
AT2G18240.1 Rer1 family protein6.0e-3764.35Show/hide
Query:  GVESDAASAVA-PLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGS
        G E++A + VA PLAKWR +F+++FQ YLDRS P+ V+RWL TL+ A IY+ RV+ V G++V+SYGL  YILNLLIGFLSPKVDPEL+ LD  SLP   S
Subjt:  GVESDAASAVA-PLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGS

Query:  DEFRPFIRRLPEFKF
        DE++PF+RRLPEFKF
Subjt:  DEFRPFIRRLPEFKF

AT2G18240.2 Rer1 family protein6.0e-3764.35Show/hide
Query:  GVESDAASAVA-PLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGS
        G E++A + VA PLAKWR +F+++FQ YLDRS P+ V+RWL TL+ A IY+ RV+ V G++V+SYGL  YILNLLIGFLSPKVDPEL+ LD  SLP   S
Subjt:  GVESDAASAVA-PLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGS

Query:  DEFRPFIRRLPEFKF
        DE++PF+RRLPEFKF
Subjt:  DEFRPFIRRLPEFKF

AT2G21600.1 endoplasmatic reticulum retrieval protein 1B1.3e-3963.79Show/hide
Query:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG
        MEG   D+ S   P+ K  ++  R +QYYLD++TPH   RW+GTL+   IY LRV+ + GFY++SYGLGIY+LNLLIGFLSP VDPEL+V DGA+LPT+G
Subjt:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKG

Query:  SDEFRPFIRRLPEFKF
        SDEF+PFIRRLPEFKF
Subjt:  SDEFRPFIRRLPEFKF

AT2G23310.1 Rer1 family protein2.1e-2949.55Show/hide
Query:  SDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFR
        SD++S    + +  + F++  Q+ LD++ PH + RW+  L V  IY++RV++V+GFY+++Y +GIY+LNL+I FLSP+ DPE  +  G SLPT+ SDE+R
Subjt:  SDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFR

Query:  PFIRRLPEFKF
        PF+RRLPEFKF
Subjt:  PFIRRLPEFKF

AT4G39220.1 Rer1 family protein4.6e-3761.54Show/hide
Query:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPEL-DVLDGASLPTK
        M+    D+ S   P+ +  ++  R +Q+YLD++TPH   RW+GTL+VA IY LRV+Y+QGFY+++YGLGIY+LNLLIGFLSP VDPE   V DG SLPT+
Subjt:  MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPEL-DVLDGASLPTK

Query:  GSDEFRPFIRRLPEFKF
        GSDEF+PFIRRLPEFKF
Subjt:  GSDEFRPFIRRLPEFKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAGTTGAGAGCGACGCGGCCTCTGCTGTAGCACCTCTGGCCAAGTGGAGGAACGATTTTGCTAGAGCATTTCAATATTACTTGGATCGATCCACTCCTCACCC
GGTTCAGAGGTGGTTGGGAACCCTTCTTGTTGCAGCAATTTATGTGTTGCGTGTTTTCTATGTTCAAGGGTTTTATGTTGTATCCTATGGATTGGGAATCTATATCTTGA
ATCTCTTGATTGGGTTTCTATCGCCCAAGGTTGATCCTGAGCTCGATGTCTTGGATGGAGCTTCCTTGCCCACTAAAGGTTCTGATGAGTTTAGGCCCTTCATACGCCGA
CTTCCGGAGTTCAAGTTTTGA
mRNA sequenceShow/hide mRNA sequence
CCAGAGGCGTGGGGAGAGAGAGATAAATGATAATAGGAAAAAATAACATTTAAAAAGGAAAAAAAAATGGGGGAATAATATTTTGGTTCAGACGAGGGAAAGCAAAATCA
CGGATTCATCGTAGAAACTAGAAAAAGAAAATCAAAGCGATTGGAAAACGAGGCAACGAAATCGACTTCATTCATCGTCTTCCCAAATTCGGTCTCAATTCTTCCATTCT
CTTCTTCCACTTCCTTTTCGGTTCTTCAAGGGGATAAGTTTTTATGGAAGGAGTTGAGAGCGACGCGGCCTCTGCTGTAGCACCTCTGGCCAAGTGGAGGAACGATTTTG
CTAGAGCATTTCAATATTACTTGGATCGATCCACTCCTCACCCGGTTCAGAGGTGGTTGGGAACCCTTCTTGTTGCAGCAATTTATGTGTTGCGTGTTTTCTATGTTCAA
GGGTTTTATGTTGTATCCTATGGATTGGGAATCTATATCTTGAATCTCTTGATTGGGTTTCTATCGCCCAAGGTTGATCCTGAGCTCGATGTCTTGGATGGAGCTTCCTT
GCCCACTAAAGGTTCTGATGAGTTTAGGCCCTTCATACGCCGACTTCCGGAGTTCAAGTTTTGACTCTTCAAGCGTCAAATTATAGCAAATGCTTGTCATTGCACGAGGT
ACGCCATCACCAAAGCTTTCTGTATTGCATTCCTCATGACCTTCTTCTCACTCTTTGATGTTCCGGTTTTCTGGCCCATTCTTCTTTGCTATTGGATTGTTCTATTTGTC
CTGACAATGAAGCGCCAGATCATGCACATGATCAAGTACAAATACATTCCTTTCAGCCTTGGAAAACAGGTGAGGCAACAAGAACTTGACTAA
Protein sequenceShow/hide protein sequence
MEGVESDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRR
LPEFKF