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Lsi08G014080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G014080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:22336864..22337199
RNA-Seq ExpressionLsi08G014080
SyntenyLsi08G014080
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011649613.2 uncharacterized membrane protein At1g75140 [Cucumis sativus]7.5e-3981.82Show/hide
Query:  MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRN
        +PEV   G  K KGKE+G  LNDGGDGGLD+KIQDG RTRAVSVTKYS FWSERFHFLSAVKLEADATCI+VLPLRD EGHSKYVAVGDERGRI VFVRN
Subjt:  MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRN

Query:  GDVVVELSTM
        GDV +EL T+
Subjt:  GDVVVELSTM

XP_022144258.1 uncharacterized membrane protein At1g75140-like [Momordica charantia]1.3e-3877.48Show/hide
Query:  MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRN
        +PEV SLGG     KEDG  LNDGGDGGL++KI+DGDRTRAVSVTKYSPFWSERFHFLSAVKL++DATCI+VLP RD EGHSKYV VGDE+GR+ VF RN
Subjt:  MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRN

Query:  GDVVVELSTMS
        GDV VEL T S
Subjt:  GDVVVELSTMS

XP_022996718.1 uncharacterized membrane protein At1g75140-like [Cucurbita maxima]4.4e-3981.98Show/hide
Query:  MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRN
        +PEV SLGG    GKEDG  LNDGGDG LD KIQDG R RAVSVTKYSPFWSERFHFLSAVKLE+DAT I+VLPLRD EGHSKYVAVGDE GRI VFVRN
Subjt:  MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRN

Query:  GDVVVELSTMS
        GDV VEL TMS
Subjt:  GDVVVELSTMS

XP_023546241.1 uncharacterized membrane protein At1g75140-like [Cucurbita pepo subsp. pepo]4.8e-3879.28Show/hide
Query:  MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRN
        +PEV SLGG    GK+DG  LNDGGDG LD +IQDG R RAVSVTKYSPFWSERFHF+SAVKLE+DAT I+VLPLRD EGHSKYVAVGDE GRI VFVRN
Subjt:  MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRN

Query:  GDVVVELSTMS
        GDV VEL TMS
Subjt:  GDVVVELSTMS

XP_038885478.1 uncharacterized membrane protein At1g75140-like [Benincasa hispida]9.4e-4283.49Show/hide
Query:  EVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRNGD
        EV  LGG K KGKEDG  LNDGGDGGLDNKIQDG R RAVSVTKYSPFWSERFHFLSAVKLE+DATCI+VLP+RD EGHSKYVAVGDE+GRI VFVRNGD
Subjt:  EVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRNGD

Query:  VVVELSTMS
        V +EL T+S
Subjt:  VVVELSTMS

TrEMBL top hitse value%identityAlignment
A0A0A0LNK9 Uncharacterized protein3.1e-3880.91Show/hide
Query:  MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRN
        +PEV   G  K KGKE+G  LNDGGDGGLD+KIQDG RTRAVSVTKYS FWSERFHFLSAVKLEADATCI+VLPLRD EGHSKYVAVGDERGRI VFV N
Subjt:  MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRN

Query:  GDVVVELSTM
        GDV +EL T+
Subjt:  GDVVVELSTM

A0A6J1CSU7 uncharacterized membrane protein At1g75140-like6.2e-3977.48Show/hide
Query:  MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRN
        +PEV SLGG     KEDG  LNDGGDGGL++KI+DGDRTRAVSVTKYSPFWSERFHFLSAVKL++DATCI+VLP RD EGHSKYV VGDE+GR+ VF RN
Subjt:  MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRN

Query:  GDVVVELSTMS
        GDV VEL T S
Subjt:  GDVVVELSTMS

A0A6J1HC37 uncharacterized membrane protein At1g75140-like1.2e-3778.38Show/hide
Query:  MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRN
        +PEV SLGG    GKEDG  LNDGG G LD ++QDG R RAVSVTKYSPFWSERFHFLSAVKLE+DAT I+VLPLRD EGHSKYVAVGDE GRI VFVRN
Subjt:  MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRN

Query:  GDVVVELSTMS
        GDV VEL T+S
Subjt:  GDVVVELSTMS

A0A6J1KBU3 uncharacterized membrane protein At1g75140-like2.1e-3981.98Show/hide
Query:  MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRN
        +PEV SLGG    GKEDG  LNDGGDG LD KIQDG R RAVSVTKYSPFWSERFHFLSAVKLE+DAT I+VLPLRD EGHSKYVAVGDE GRI VFVRN
Subjt:  MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRN

Query:  GDVVVELSTMS
        GDV VEL TMS
Subjt:  GDVVVELSTMS

A0A6J1KPQ0 uncharacterized membrane protein At1g75140-like isoform X14.4e-3777.06Show/hide
Query:  EVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRNGD
        EV SLGGGKG        L+DGGDGGLDN IQDG   RAV+VTKYSPFWSERFHFLSAVKL+ DATCI+VLPLRD EGHSKYVAVGDERGR+ VF+RNGD
Subjt:  EVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRNGD

Query:  VVVELSTMS
        V VEL T+S
Subjt:  VVVELSTMS

SwissProt top hitse value%identityAlignment
Q9FRK5 Uncharacterized membrane protein At1g751401.2e-2368.49Show/hide
Query:  DRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRNGDVVVELST
        ++ +A SVTKYSPFWSERF F SAVKL+++ATCI+VLP RD EG SKY AVGD  GR+ VF+RNGDV+VE  T
Subjt:  DRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRNGDVVVELST

Arabidopsis top hitse value%identityAlignment
AT1G19370.1 unknown protein1.7e-2569.44Show/hide
Query:  RTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRNGDVVVELST
        R +A SVTKYSPFWSERF F SAVKL +DATCI+VLP RD EG SKY A+GD +GR+ VF+RNGDV++E  T
Subjt:  RTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRNGDVVVELST

AT1G75140.1 unknown protein8.5e-2568.49Show/hide
Query:  DRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRNGDVVVELST
        ++ +A SVTKYSPFWSERF F SAVKL+++ATCI+VLP RD EG SKY AVGD  GR+ VF+RNGDV+VE  T
Subjt:  DRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRNGDVVVELST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGAGGTGTTTAGTTTGGGCGGGGGGAAAGGGAAAGGGAAAGAAGATGGTATGAAACTGAATGATGGTGGAGATGGCGGCTTGGACAATAAAATTCAAGATGGGGA
TAGAACGAGAGCTGTTTCAGTGACCAAATACAGTCCATTTTGGTCTGAGAGGTTCCACTTTTTGTCTGCTGTGAAACTGGAGGCTGATGCTACTTGTATCGATGTCTTGC
CTCTTAGGGATTCTGAGGGTCATAGCAAGTATGTTGCAGTTGGAGATGAGAGAGGGAGAATTTGTGTGTTTGTGAGAAATGGAGATGTTGTGGTTGAGCTTAGTACGATG
TCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGAGGTGTTTAGTTTGGGCGGGGGGAAAGGGAAAGGGAAAGAAGATGGTATGAAACTGAATGATGGTGGAGATGGCGGCTTGGACAATAAAATTCAAGATGGGGA
TAGAACGAGAGCTGTTTCAGTGACCAAATACAGTCCATTTTGGTCTGAGAGGTTCCACTTTTTGTCTGCTGTGAAACTGGAGGCTGATGCTACTTGTATCGATGTCTTGC
CTCTTAGGGATTCTGAGGGTCATAGCAAGTATGTTGCAGTTGGAGATGAGAGAGGGAGAATTTGTGTGTTTGTGAGAAATGGAGATGTTGTGGTTGAGCTTAGTACGATG
TCTTAA
Protein sequenceShow/hide protein sequence
MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRNGDVVVELSTM
S