; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G014250 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G014250
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmediator of RNA polymerase II transcription subunit 18
Genome locationchr08:22480666..22486058
RNA-Seq ExpressionLsi08G014250
SyntenyLsi08G014250
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0006369 - termination of RNA polymerase II transcription (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016592 - mediator complex (cellular component)
GO:0070847 - core mediator complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR005134 - Uncharacterised protein family UPF0114


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065266.1 UPF0114 domain-containing protein [Cucumis melo var. makuwa]4.2e-12486.51Show/hide
Query:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMKAAAAAAPETVETKTEELNLGSLLANLLVQLKTPVGKTK
        MAATRFMQR+RPA+AVSSSSSSSSPSS   VR LGKTGLNLNNGERLITSG GE RQ+VA+K AA  AP+TVETKT EL+LGSL+++LLVQLKT +GKTK
Subjt:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMKAAAAAAPETVETKTEELNLGSLLANLLVQLKTPVGKTK

Query:  IQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMKEK
        I+KR+IQKFIEKIIIDCRFFTLLAV+GSL+GS+LC+IEGSFIVAESYLQYFH LSQ ++QTH V LLIEALDMFLVGTALVVFG+GLFAMFVGSEKMKEK
Subjt:  IQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMKEK

Query:  NRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGS
        NR  IS SNLFGLFYMKKIPTWVEMESMS AKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVG GGS
Subjt:  NRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGS

XP_008444667.1 PREDICTED: uncharacterized protein LOC103487936 [Cucumis melo]1.6e-12385.81Show/hide
Query:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMKAAAAAAPETVETKTEELNLGSLLANLLVQLKTPVGKTK
        MAATRFMQR+RPA+AVSSSSSSSSPSS   VR LGKTGLNLNNGERLITSG GE RQ++A+K AA  AP+TVETKT EL+LGSL+++LLVQLKT +GKTK
Subjt:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMKAAAAAAPETVETKTEELNLGSLLANLLVQLKTPVGKTK

Query:  IQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMKEK
        I+KR+IQKFIEKIIIDCRFFTLLAV+GSL+GS+LC+IEGSFIVAESYLQYFH LSQ ++QTH V LLIEALDMFLVGTALVVFG+GLFAMFVGSEKMKEK
Subjt:  IQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMKEK

Query:  NRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGS
        N+  IS SNLFGLFYMKKIPTWVEMESMS AKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVG GGS
Subjt:  NRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGS

XP_011649594.1 uncharacterized protein LOC101218655 isoform X1 [Cucumis sativus]9.5e-12485.17Show/hide
Query:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMKAAAA-AAPETVETKTEELNLGSLLANLLVQLKTPVGKT
        MAATRF+QR+RPA+AVS+SSSSSSPSS   VR LGKTGLNLNNGERLITSG  ERRQ+V +KAAAA AAP+TVETKT EL+LGSL+ANLL+QLK  +GKT
Subjt:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMKAAAA-AAPETVETKTEELNLGSLLANLLVQLKTPVGKT

Query:  KIQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMKE
        KI+K +IQKFIEKIIIDCRFFTLLAV+GSL+GS+LC+IEGSFIV ESYLQYFHGLSQ +DQTH V LLIEALDMFLVGTAL+VFG+GLFAMFVGSEKMK+
Subjt:  KIQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMKE

Query:  KNRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGS
        KN+   S SNLFGLFYMKKIPTWVEMESMS AKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGS
Subjt:  KNRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGS

XP_022951147.1 uncharacterized protein LOC111454079 [Cucurbita moschata]1.1e-11982.07Show/hide
Query:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMK--AAAAAAPETVETKTEELNLGSLLANLLVQLKTPVGK
        MAATR ++ +RP++ V SSSSSSSPS+A TVRCLGKTGLN  NGERL+TSGDGERRQIV +K  AAAAAAPETVET+T EL+LGSLLANLLVQLK    K
Subjt:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMK--AAAAAAPETVETKTEELNLGSLLANLLVQLKTPVGK

Query:  TKIQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMK
        TKI++RQIQKFIEKIIIDCRFFTL AVAGSLLGS+LCF+EGSFIVAESYLQYF+G+S+ SD++H V LLIE+LDMFLVGTALVVFGVGLFAMFVGSEKM 
Subjt:  TKIQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMK

Query:  EKNRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGG
        EKN   +SGSNLFGLFYMK IPTWVEMES+S+AKSKIGHAVMMILQVGVLEKFK+IPLSSA DLACFAAA+LISSASIFFLS+LN+GGGG
Subjt:  EKNRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGG

XP_038885641.1 uncharacterized protein LOC120075956 [Benincasa hispida]1.8e-13592.39Show/hide
Query:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMKAAAAAAPETVETKTEELNLGSLLANLLVQLKTPVGKTK
        M ATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGER+QIVA+K  AAAAP+TVET+TEELNLGSLLANLLVQLKT VGKTK
Subjt:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMKAAAAAAPETVETKTEELNLGSLLANLLVQLKTPVGKTK

Query:  IQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMKEK
        IQ+RQIQKFIEKIIIDCRFFTLLAVAGSLLGS+LC+IEGSFIVAESYLQYFHGLSQSS+Q H V LLIEALDMFLVGTALVVFGVGLFAMF+GS KMKEK
Subjt:  IQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMKEK

Query:  NRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGS
        NRPVISGSN FGLF MKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAV++SSASIFFLSKLN+GGGGS
Subjt:  NRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGS

TrEMBL top hitse value%identityAlignment
A0A0A0LLC9 Uncharacterized protein4.6e-12485.17Show/hide
Query:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMKAAAA-AAPETVETKTEELNLGSLLANLLVQLKTPVGKT
        MAATRF+QR+RPA+AVS+SSSSSSPSS   VR LGKTGLNLNNGERLITSG  ERRQ+V +KAAAA AAP+TVETKT EL+LGSL+ANLL+QLK  +GKT
Subjt:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMKAAAA-AAPETVETKTEELNLGSLLANLLVQLKTPVGKT

Query:  KIQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMKE
        KI+K +IQKFIEKIIIDCRFFTLLAV+GSL+GS+LC+IEGSFIV ESYLQYFHGLSQ +DQTH V LLIEALDMFLVGTAL+VFG+GLFAMFVGSEKMK+
Subjt:  KIQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMKE

Query:  KNRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGS
        KN+   S SNLFGLFYMKKIPTWVEMESMS AKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGS
Subjt:  KNRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGS

A0A1S3BAX1 uncharacterized protein LOC1034879367.8e-12485.81Show/hide
Query:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMKAAAAAAPETVETKTEELNLGSLLANLLVQLKTPVGKTK
        MAATRFMQR+RPA+AVSSSSSSSSPSS   VR LGKTGLNLNNGERLITSG GE RQ++A+K AA  AP+TVETKT EL+LGSL+++LLVQLKT +GKTK
Subjt:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMKAAAAAAPETVETKTEELNLGSLLANLLVQLKTPVGKTK

Query:  IQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMKEK
        I+KR+IQKFIEKIIIDCRFFTLLAV+GSL+GS+LC+IEGSFIVAESYLQYFH LSQ ++QTH V LLIEALDMFLVGTALVVFG+GLFAMFVGSEKMKEK
Subjt:  IQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMKEK

Query:  NRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGS
        N+  IS SNLFGLFYMKKIPTWVEMESMS AKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVG GGS
Subjt:  NRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGS

A0A5A7VG09 UPF0114 domain-containing protein2.1e-12486.51Show/hide
Query:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMKAAAAAAPETVETKTEELNLGSLLANLLVQLKTPVGKTK
        MAATRFMQR+RPA+AVSSSSSSSSPSS   VR LGKTGLNLNNGERLITSG GE RQ+VA+K AA  AP+TVETKT EL+LGSL+++LLVQLKT +GKTK
Subjt:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMKAAAAAAPETVETKTEELNLGSLLANLLVQLKTPVGKTK

Query:  IQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMKEK
        I+KR+IQKFIEKIIIDCRFFTLLAV+GSL+GS+LC+IEGSFIVAESYLQYFH LSQ ++QTH V LLIEALDMFLVGTALVVFG+GLFAMFVGSEKMKEK
Subjt:  IQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMKEK

Query:  NRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGS
        NR  IS SNLFGLFYMKKIPTWVEMESMS AKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVG GGS
Subjt:  NRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGS

A0A6J1GGV4 uncharacterized protein LOC1114540795.2e-12082.07Show/hide
Query:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMK--AAAAAAPETVETKTEELNLGSLLANLLVQLKTPVGK
        MAATR ++ +RP++ V SSSSSSSPS+A TVRCLGKTGLN  NGERL+TSGDGERRQIV +K  AAAAAAPETVET+T EL+LGSLLANLLVQLK    K
Subjt:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMK--AAAAAAPETVETKTEELNLGSLLANLLVQLKTPVGK

Query:  TKIQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMK
        TKI++RQIQKFIEKIIIDCRFFTL AVAGSLLGS+LCF+EGSFIVAESYLQYF+G+S+ SD++H V LLIE+LDMFLVGTALVVFGVGLFAMFVGSEKM 
Subjt:  TKIQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMK

Query:  EKNRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGG
        EKN   +SGSNLFGLFYMK IPTWVEMES+S+AKSKIGHAVMMILQVGVLEKFK+IPLSSA DLACFAAA+LISSASIFFLS+LN+GGGG
Subjt:  EKNRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGG

A0A6J1KI88 uncharacterized protein LOC1114960207.3e-11480.34Show/hide
Query:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMK---AAAAAAPETVETKTEELNLGSLLANLLVQLKTPVG
        MAATR ++ +RP SA   SSSSSSPS+A  VRCL KTGLN  NGERLITSGDGERRQIV +K   AAAAAAPETVETKT EL+LGSLLANLLVQLK    
Subjt:  MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMK---AAAAAAPETVETKTEELNLGSLLANLLVQLKTPVG

Query:  KTKIQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKM
        K KI++RQIQKFIEKIII+CRFFTL AVAGSLLGS+LCF+EGSFIVAESYLQYF+ +S+ SD++H V LLIE+LDMFLVGTALVVFGVGLFAMFVGSEKM
Subjt:  KTKIQKRQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKM

Query:  KEKNRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGG
         EKNR  +SGSNLFGLFYMK IPTWVEMES+S+AKSKIGHAVMMILQVGVLEK K+IPLSSA DLACFAAA+LI SASIFFLS+LN+GGG
Subjt:  KEKNRPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGG

SwissProt top hitse value%identityAlignment
Q9SJZ6 Mediator of RNA polymerase II transcription subunit 189.9e-9280.1Show/hide
Query:  QHVEALEILLQGICGVPRERLRLHEICLKSGPSLGAVASEVRILCDLEQAEPTWTVKHIGGAIRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDH
        QHVEALEILLQG+CGV RERLR+HE+CL+SGP+LG V+SEVR+LCDL+Q EPTWTVKH+GGA+RGAGA+Q+SVLVR M+ESKVSKN LR+FYALGYKLDH
Subjt:  QHVEALEILLQGICGVPRERLRLHEICLKSGPSLGAVASEVRILCDLEQAEPTWTVKHIGGAIRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDH

Query:  ELLRVGFAFRFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSDNYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSD
        ELL+VGFAF F R AHI+V+VSSVNKM K+H+ DEAVPVTPG+Q+V+VTAPATS+NYSEVA AVS+FCE+LAPL+HLSKP ISTGVVPTAAAAAASL+SD
Subjt:  ELLRVGFAFRFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSDNYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSD

Query:  GAGTTM
        G GTT+
Subjt:  GAGTTM

Arabidopsis top hitse value%identityAlignment
AT2G22370.1 unknown protein7.1e-9380.1Show/hide
Query:  QHVEALEILLQGICGVPRERLRLHEICLKSGPSLGAVASEVRILCDLEQAEPTWTVKHIGGAIRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDH
        QHVEALEILLQG+CGV RERLR+HE+CL+SGP+LG V+SEVR+LCDL+Q EPTWTVKH+GGA+RGAGA+Q+SVLVR M+ESKVSKN LR+FYALGYKLDH
Subjt:  QHVEALEILLQGICGVPRERLRLHEICLKSGPSLGAVASEVRILCDLEQAEPTWTVKHIGGAIRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDH

Query:  ELLRVGFAFRFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSDNYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSD
        ELL+VGFAF F R AHI+V+VSSVNKM K+H+ DEAVPVTPG+Q+V+VTAPATS+NYSEVA AVS+FCE+LAPL+HLSKP ISTGVVPTAAAAAASL+SD
Subjt:  ELLRVGFAFRFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSDNYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSD

Query:  GAGTTM
        G GTT+
Subjt:  GAGTTM

AT4G19390.1 Uncharacterised protein family (UPF0114)1.2e-3641.11Show/hide
Query:  IQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGS-EKMKEKNRPV
        +++ IEK+I  CRF T L   GSLLGSVLCFI+G   V +S+LQY      S ++  ++ LL+EA+D++L+GT ++VFG+GL+ +F+ + +  + +   +
Subjt:  IQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGS-EKMKEKNRPV

Query:  ISG-SNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLN
        +S  S+LFG+F +K+ P W+E++S+S+ K+K+GH ++M+L +G+ +K K + ++S  DL C + ++  SSA +F LS+LN
Subjt:  ISG-SNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLN

AT5G13720.1 Uncharacterised protein family (UPF0114)1.5e-3135.87Show/hide
Query:  RQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFV--GSEKMKEKN
        R  +  +E+II D RF  LLAV GSL GS+LCF+ G   + E+Y  Y+   S+      MV  L+EA+D++L GT +++F +GL+ +F+      +  ++
Subjt:  RQIQKFIEKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFV--GSEKMKEKN

Query:  RPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVG
           +  S+LFG+F MK+ P W+++ S+ + K+K+GH ++MIL V + E+ K + +++ +DL  ++  + +SSAS++ L  L+ G
Subjt:  RPVISGSNLFGLFYMKKIPTWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCGACTAGATTCATGCAGCGACTTCGGCCAGCCTCCGCCGTGTCTTCCTCTTCCTCTTCTTCATCTCCGTCGTCGGCGATGACCGTGAGGTGTTTGGGCAAAAC
AGGGCTAAATTTGAACAACGGCGAACGGTTAATAACTTCTGGAGATGGCGAGAGAAGGCAGATAGTCGCCATGAAGGCGGCGGCGGCGGCGGCTCCCGAGACTGTGGAAA
CTAAAACCGAAGAATTGAATTTGGGTTCTTTGCTGGCGAATCTACTCGTTCAATTGAAGACTCCCGTGGGGAAGACGAAGATTCAGAAGCGACAGATTCAGAAGTTCATC
GAAAAGATCATAATCGACTGTCGATTCTTCACATTGTTAGCCGTCGCCGGATCTTTACTGGGTTCAGTGCTCTGTTTTATTGAGGGGAGTTTCATTGTTGCAGAGTCATA
TCTGCAGTACTTTCATGGTCTTTCACAGAGCTCGGACCAAACTCATATGGTGGCGCTTCTAATTGAAGCCTTAGATATGTTCCTCGTCGGAACCGCTCTGGTTGTTTTTG
GGGTCGGATTGTTTGCAATGTTCGTCGGATCGGAGAAGATGAAGGAAAAAAATCGGCCAGTGATTTCTGGGTCGAATTTGTTTGGTCTGTTCTACATGAAGAAAATTCCG
ACGTGGGTAGAAATGGAATCGATGTCGCAGGCGAAATCGAAGATCGGACATGCGGTGATGATGATACTGCAAGTGGGTGTGTTGGAAAAGTTCAAGAACATACCATTGAG
CTCTGCCGTCGATCTCGCATGTTTCGCCGCCGCCGTTCTGATTTCCTCCGCCTCCATCTTCTTCCTCTCCAAACTCAACGTTGGGGGAGGCGGCAGCGTCGAGATCGAGA
TTAGGATTTTGAAGAAGCATCGCGGTTTAAAGTTTGAACTTCAAGGCAGTGGGACTGTAGATGCAGCTCTGAATTTGAAGCTTCGTTTGATTGTGCAGCACGTTGAAGCC
CTTGAGATACTTCTTCAAGGTATCTGCGGCGTTCCTAGAGAAAGATTGAGGCTCCATGAAATATGCCTAAAAAGTGGACCTAGCCTAGGTGCTGTGGCATCGGAGGTTCG
GATCTTGTGCGACCTTGAGCAGGCTGAACCAACATGGACGGTTAAACATATTGGAGGGGCAATAAGAGGTGCAGGTGCTGAACAACTTTCTGTTCTGGTTAGGACAATGG
TAGAAAGCAAAGTTAGCAAGAATGTGCTTCGTCTATTCTATGCACTTGGCTATAAGTTAGATCATGAGCTGTTGAGAGTTGGTTTTGCTTTCCGCTTCCACCGGGGTGCC
CACATAACAGTGACAGTTTCATCAGTTAATAAGATGTTAAAGCTACATTCAACTGATGAGGCTGTCCCTGTAACACCTGGTATACAGCTGGTCGAAGTGACAGCCCCAGC
AACTTCTGATAACTATTCTGAAGTAGCTGGTGCAGTGTCGACTTTCTGTGAATATCTTGCACCGCTGCTGCATTTGTCAAAACCGGGAATATCGACAGGTGTTGTTCCTA
CTGCTGCTGCAGCTGCAGCATCTCTTCTATCTGATGGTGCAGGAACAACAATGTAG
mRNA sequenceShow/hide mRNA sequence
CCGGCCAAAATATGCTTCGAATCTTCCTCCTTCTTTACTTGGTATTAATAAAACGCACCCAATTACGTCCACAAACCAAACACAAGAACAATGGCGGCGACTAGATTCAT
GCAGCGACTTCGGCCAGCCTCCGCCGTGTCTTCCTCTTCCTCTTCTTCATCTCCGTCGTCGGCGATGACCGTGAGGTGTTTGGGCAAAACAGGGCTAAATTTGAACAACG
GCGAACGGTTAATAACTTCTGGAGATGGCGAGAGAAGGCAGATAGTCGCCATGAAGGCGGCGGCGGCGGCGGCTCCCGAGACTGTGGAAACTAAAACCGAAGAATTGAAT
TTGGGTTCTTTGCTGGCGAATCTACTCGTTCAATTGAAGACTCCCGTGGGGAAGACGAAGATTCAGAAGCGACAGATTCAGAAGTTCATCGAAAAGATCATAATCGACTG
TCGATTCTTCACATTGTTAGCCGTCGCCGGATCTTTACTGGGTTCAGTGCTCTGTTTTATTGAGGGGAGTTTCATTGTTGCAGAGTCATATCTGCAGTACTTTCATGGTC
TTTCACAGAGCTCGGACCAAACTCATATGGTGGCGCTTCTAATTGAAGCCTTAGATATGTTCCTCGTCGGAACCGCTCTGGTTGTTTTTGGGGTCGGATTGTTTGCAATG
TTCGTCGGATCGGAGAAGATGAAGGAAAAAAATCGGCCAGTGATTTCTGGGTCGAATTTGTTTGGTCTGTTCTACATGAAGAAAATTCCGACGTGGGTAGAAATGGAATC
GATGTCGCAGGCGAAATCGAAGATCGGACATGCGGTGATGATGATACTGCAAGTGGGTGTGTTGGAAAAGTTCAAGAACATACCATTGAGCTCTGCCGTCGATCTCGCAT
GTTTCGCCGCCGCCGTTCTGATTTCCTCCGCCTCCATCTTCTTCCTCTCCAAACTCAACGTTGGGGGAGGCGGCAGCGTCGAGATCGAGATTAGGATTTTGAAGAAGCAT
CGCGGTTTAAAGTTTGAACTTCAAGGCAGTGGGACTGTAGATGCAGCTCTGAATTTGAAGCTTCGTTTGATTGTGCAGCACGTTGAAGCCCTTGAGATACTTCTTCAAGG
TATCTGCGGCGTTCCTAGAGAAAGATTGAGGCTCCATGAAATATGCCTAAAAAGTGGACCTAGCCTAGGTGCTGTGGCATCGGAGGTTCGGATCTTGTGCGACCTTGAGC
AGGCTGAACCAACATGGACGGTTAAACATATTGGAGGGGCAATAAGAGGTGCAGGTGCTGAACAACTTTCTGTTCTGGTTAGGACAATGGTAGAAAGCAAAGTTAGCAAG
AATGTGCTTCGTCTATTCTATGCACTTGGCTATAAGTTAGATCATGAGCTGTTGAGAGTTGGTTTTGCTTTCCGCTTCCACCGGGGTGCCCACATAACAGTGACAGTTTC
ATCAGTTAATAAGATGTTAAAGCTACATTCAACTGATGAGGCTGTCCCTGTAACACCTGGTATACAGCTGGTCGAAGTGACAGCCCCAGCAACTTCTGATAACTATTCTG
AAGTAGCTGGTGCAGTGTCGACTTTCTGTGAATATCTTGCACCGCTGCTGCATTTGTCAAAACCGGGAATATCGACAGGTGTTGTTCCTACTGCTGCTGCAGCTGCAGCA
TCTCTTCTATCTGATGGTGCAGGAACAACAATGTAGATGGTTCGTTTTGATGGCAACAATTATTTTGAAGGTTCGTTATGCGGATCGATCGTTTTTTTGGCATTGAAGTT
CTTCATCCATCTCTTTTTGAGCCTTGAAGGTTCTTGGTTTGGATATGATGGGAAAATATGATCTGAATTCTGGATTTGATTGTCAAGTTCTGCAAAAGTTTAGGAGTTAA
CCAAAACTTAAATCTCAAAAAGATTTCTTGTAGTTGATATACATGATTGTCATGTTGGTTGCCGTTGAGTTTAAAGTGGCTAGCCTGTAGCATATCTTGTTGATGTCTTC
AAAGAAGAATGAAGCTTATATTTATGTAAATATCTTCAACTACCAGATCAACTCCACTTGTTCAGATTCTTTTTATCTAAATGATTGAAGAATTATATAGCATTTTGAAT
TTGGGGGTTTTTTTAGTGTA
Protein sequenceShow/hide protein sequence
MAATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERRQIVAMKAAAAAAPETVETKTEELNLGSLLANLLVQLKTPVGKTKIQKRQIQKFI
EKIIIDCRFFTLLAVAGSLLGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHMVALLIEALDMFLVGTALVVFGVGLFAMFVGSEKMKEKNRPVISGSNLFGLFYMKKIP
TWVEMESMSQAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGSVEIEIRILKKHRGLKFELQGSGTVDAALNLKLRLIVQHVEA
LEILLQGICGVPRERLRLHEICLKSGPSLGAVASEVRILCDLEQAEPTWTVKHIGGAIRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAFRFHRGA
HITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSDNYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM