; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G014520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G014520
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:22699633..22703407
RNA-Seq ExpressionLsi08G014520
SyntenyLsi08G014520
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029348.1 hypothetical protein SDJN02_07686, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-1393.88Show/hide
Query:  MARLLRSSSRKLRPFKLEHREKLASTEKNASFVAAVEQHVRKPRKSCLT
        M RLLRSSSRKLRPFKLEHREKLASTEKNASFVAA+E HVRKPRKSCLT
Subjt:  MARLLRSSSRKLRPFKLEHREKLASTEKNASFVAAVEQHVRKPRKSCLT
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTCTGTGTGATCTGCGGAGGGGGCAACCTTAACTGTGACTATTGCTACAGTAACTGCGTATTAGCGATCAATAGCTTGATGAATTTCGTTACCAAGGCAAGGGA
GCTATGTCGGACTCTTCAATCCCAACATTGCTGCGGGCAGAAGCAAAATACGAAAACAGAACTTGGCACTGTATTCGGACATCAATATGTCTTTACAATTTTGGTGCCTT
TACTCCATGACCAAGATTCAGATGGCGACTTGGGCAGAGGTGGAAGTAACACTGCCTTCCTGCAAAGACCGAATGGCCATCCTTCACAATGGAAAACTTCCTGCAAGATG
GCGCGCCTCTTGAGATCTTCATCTAGAAAATTAAGACCATTTAAGCTCGAACATCGGGAAAAGTTGGCCTCCACAGAAAAGAATGCTTCATTTGTTGCTGCAGTTGAACA
ACATGTGAGAAAACCCAGGAAAAGCTGTCTGACAGATTACCACCAAAGCCAAAGGGACAGTAAAGGAGAAAATGATCGAGGATCCATCCCCGTTGTAACAAAAGCAGCAA
TCCAAGGGAGCAAAGGACCAATATGCTACCGCGACTTCGTGAATGAGCTAAACCTATTGGAAAATAGTTCATCGCCATTCCCATTTGAATCCAGCCAGACTTATTTATCA
TACCCCCTTTCAGTTGTACTTCATTTCGGGTGTCTTCGGTTTTACAAGAGAGCCTGCGAGGGAGAAAAATATCTCTCGTCTCATCCTAAATCATATTACACTGGTCCACA
AAAGAAGGAAATTACATTGCATCTTGCTCAGCAGTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTCTGTGTGATCTGCGGAGGGGGCAACCTTAACTGTGACTATTGCTACAGTAACTGCGTATTAGCGATCAATAGCTTGATGAATTTCGTTACCAAGGCAAGGGA
GCTATGTCGGACTCTTCAATCCCAACATTGCTGCGGGCAGAAGCAAAATACGAAAACAGAACTTGGCACTGTATTCGGACATCAATATGTCTTTACAATTTTGGTGCCTT
TACTCCATGACCAAGATTCAGATGGCGACTTGGGCAGAGGTGGAAGTAACACTGCCTTCCTGCAAAGACCGAATGGCCATCCTTCACAATGGAAAACTTCCTGCAAGATG
GCGCGCCTCTTGAGATCTTCATCTAGAAAATTAAGACCATTTAAGCTCGAACATCGGGAAAAGTTGGCCTCCACAGAAAAGAATGCTTCATTTGTTGCTGCAGTTGAACA
ACATGTGAGAAAACCCAGGAAAAGCTGTCTGACAGATTACCACCAAAGCCAAAGGGACAGTAAAGGAGAAAATGATCGAGGATCCATCCCCGTTGTAACAAAAGCAGCAA
TCCAAGGGAGCAAAGGACCAATATGCTACCGCGACTTCGTGAATGAGCTAAACCTATTGGAAAATAGTTCATCGCCATTCCCATTTGAATCCAGCCAGACTTATTTATCA
TACCCCCTTTCAGTTGTACTTCATTTCGGGTGTCTTCGGTTTTACAAGAGAGCCTGCGAGGGAGAAAAATATCTCTCGTCTCATCCTAAATCATATTACACTGGTCCACA
AAAGAAGGAAATTACATTGCATCTTGCTCAGCAGTCATAG
Protein sequenceShow/hide protein sequence
MKFCVICGGGNLNCDYCYSNCVLAINSLMNFVTKARELCRTLQSQHCCGQKQNTKTELGTVFGHQYVFTILVPLLHDQDSDGDLGRGGSNTAFLQRPNGHPSQWKTSCKM
ARLLRSSSRKLRPFKLEHREKLASTEKNASFVAAVEQHVRKPRKSCLTDYHQSQRDSKGENDRGSIPVVTKAAIQGSKGPICYRDFVNELNLLENSSSPFPFESSQTYLS
YPLSVVLHFGCLRFYKRACEGEKYLSSHPKSYYTGPQKKEITLHLAQQS