CuGenDBv2

Gene ID	Lsi08G014530
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr08:22699540..22700897
RNA-Seq Expression	Lsi08G014530
Synteny	Lsi08G014530
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0060876.1 uncharacterized protein E6C27_scaffold501G00080 [Cucumis melo var. makuwa]

4.5e-106

88.53

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Query:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEE--------------EIVSEIRSRALEKLKRKINLSDSFSWVFSPA
        MGVFYQEDPPNPSRKCFLAG LKDAFCNCHTF KPLP  NDEDEYPTSDFDD EE              EIVSEIR+RA+EKLKRK NLSDSFSWVFSPA
Subjt:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEE--------------EIVSEIRSRALEKLKRKINLSDSFSWVFSPA

Query:  TKELYITSMEIEKMDGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPK
        TKELYITSMEIEKMD SGNEDN GDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRR ILQEVFHCEGWPFGLCRKAVLLPPLPK
Subjt:  TKELYITSMEIEKMDGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPK

Query:  SPSESWSWSKGTKIVKTY
        SPSESWSWSKGTKIVKTY
Subjt:  SPSESWSWSKGTKIVKTY

XP_004152797.1 uncharacterized protein LOC101221028 [Cucumis sativus]

6.2e-108

93.63

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Query:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKM
        MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTF KPLP  NDED+YPTSDFDD EEEIVSEIR+RA+EKLKRK NLSDSFSWVFSPATKELYITSMEIEKM
Subjt:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKM

Query:  DGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI
        D SGNEDN GDEFYSV+SFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRR ILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESW WSKGTKI
Subjt:  DGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI

Query:  VKTY
        VKTY
Subjt:  VKTY

XP_008444637.1 PREDICTED: uncharacterized protein LOC103487908 [Cucumis melo]

5.6e-109

94.61

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Query:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKM
        MGVFYQEDPPNPSRKCFLAG LKDAFCNCHTF KPLP  NDEDEYPTSDFDD EEEIVSEIR+RA+EKLKRK NLSDSFSWVFSPATKELYITSMEIEKM
Subjt:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKM

Query:  DGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI
        D SGNEDN GDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRR ILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI
Subjt:  DGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI

Query:  VKTY
        VKTY
Subjt:  VKTY

XP_022996469.1 uncharacterized protein LOC111491711 [Cucurbita maxima]

6.0e-103

91.58

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Query:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKM
        MGVFYQEDPPNPSRKCFLAGALKD  CNCHTFGKP PNSN ED+YPTSDFDDEEEEIVSEIRSRA+EKL+RK NLSDSFSWVFSPATKELYITSMEIEKM
Subjt:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKM

Query:  DGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI
        D  GNEDNTGDEFYSVQSFLT CS+AAT EAFFSVEANFSRCSSLNGLNFLDEDLKRR ILQE+FHCEGWPFGLCRKA LLPPLPKSPSESW WSKGTKI
Subjt:  DGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI

Query:  VK
        VK
Subjt:  VK

XP_038884891.1 uncharacterized protein LOC120075509 [Benincasa hispida]

1.1e-109

94.61

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Query:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKM
        MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTF K LPNSND+DEY TSDFDD+EEEIVSEIRSRA+EKLKRK NLSDSFSWVFSPATKELY+TSMEIEKM
Subjt:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKM

Query:  DGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI
        D SGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRR ILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSW+KGTKI
Subjt:  DGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI

Query:  VKTY
        VKTY
Subjt:  VKTY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LRD5 Uncharacterized protein

3.0e-108

93.63

Show/hide

Query:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKM
        MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTF KPLP  NDED+YPTSDFDD EEEIVSEIR+RA+EKLKRK NLSDSFSWVFSPATKELYITSMEIEKM
Subjt:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKM

Query:  DGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI
        D SGNEDN GDEFYSV+SFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRR ILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESW WSKGTKI
Subjt:  DGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI

Query:  VKTY
        VKTY
Subjt:  VKTY

A0A1S3BAA9 uncharacterized protein LOC103487908

2.7e-109

94.61

Show/hide

Query:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKM
        MGVFYQEDPPNPSRKCFLAG LKDAFCNCHTF KPLP  NDEDEYPTSDFDD EEEIVSEIR+RA+EKLKRK NLSDSFSWVFSPATKELYITSMEIEKM
Subjt:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKM

Query:  DGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI
        D SGNEDN GDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRR ILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI
Subjt:  DGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI

Query:  VKTY
        VKTY
Subjt:  VKTY

A0A5A7V2Y9 Uncharacterized protein

2.2e-106

88.53

Show/hide

Query:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEE--------------EIVSEIRSRALEKLKRKINLSDSFSWVFSPA
        MGVFYQEDPPNPSRKCFLAG LKDAFCNCHTF KPLP  NDEDEYPTSDFDD EE              EIVSEIR+RA+EKLKRK NLSDSFSWVFSPA
Subjt:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEE--------------EIVSEIRSRALEKLKRKINLSDSFSWVFSPA

Query:  TKELYITSMEIEKMDGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPK
        TKELYITSMEIEKMD SGNEDN GDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRR ILQEVFHCEGWPFGLCRKAVLLPPLPK
Subjt:  TKELYITSMEIEKMDGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPK

Query:  SPSESWSWSKGTKIVKTY
        SPSESWSWSKGTKIVKTY
Subjt:  SPSESWSWSKGTKIVKTY

A0A6J1C1I1 uncharacterized protein LOC111007604

4.2e-102

88.73

Show/hide

Query:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKM
        MGVFYQEDPPN SRKCFLA ALKDAFCNCHTFG+ LPNSN EDE P SD DDEEEEIVSEI SRA+EKL+RK NLSDSFSWVFSPATKELYITSMEIEKM
Subjt:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKM

Query:  DGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI
        D SGNEDNTGDEF+SVQSFLTCCS+AATNEAFFSVEANFSRCSSLNGL+FLDEDL+RR+ILQE  HCEGWPFGLCRKA+LLPPLPKSPSESWSWSK TK+
Subjt:  DGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI

Query:  VKTY
        VKTY
Subjt:  VKTY

A0A6J1K8T4 uncharacterized protein LOC111491711

2.9e-103

91.58

Show/hide

Query:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKM
        MGVFYQEDPPNPSRKCFLAGALKD  CNCHTFGKP PNSN ED+YPTSDFDDEEEEIVSEIRSRA+EKL+RK NLSDSFSWVFSPATKELYITSMEIEKM
Subjt:  MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKM

Query:  DGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI
        D  GNEDNTGDEFYSVQSFLT CS+AAT EAFFSVEANFSRCSSLNGLNFLDEDLKRR ILQE+FHCEGWPFGLCRKA LLPPLPKSPSESW WSKGTKI
Subjt:  DGSGNEDNTGDEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI

Query:  VK
        VK
Subjt:  VK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G47410.1 unknown protein

2.6e-27

37.76

Show/hide

Query:  LAGALKDAFCNCHTF-GKPLPNSN---DEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLS-DSFSWVFSPATKELYITSMEIEKMDGSGNEDNTGDE
        +A  ++DA   C+   G+ +  S+   D+D  P  DFD + E +V EIRSRA+EKL++K     +  ++ F        +   +IE            +E
Subjt:  LAGALKDAFCNCHTF-GKPLPNSN---DEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLS-DSFSWVFSPATKELYITSMEIEKMDGSGNEDNTGDE

Query:  FYSVQ-SFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDE-------DLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI
        F SV+ SF  CC +  + E + + +  FSR SSL GL   ++       ++K+ +++QE  HC+GWPFGL RKA LLPPLPKSP+ESWSW K T++
Subjt:  FYSVQ-SFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDE-------DLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI

AT1G47410.2 unknown protein

2.6e-27

37.76

Show/hide

Query:  LAGALKDAFCNCHTF-GKPLPNSN---DEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLS-DSFSWVFSPATKELYITSMEIEKMDGSGNEDNTGDE
        +A  ++DA   C+   G+ +  S+   D+D  P  DFD + E +V EIRSRA+EKL++K     +  ++ F        +   +IE            +E
Subjt:  LAGALKDAFCNCHTF-GKPLPNSN---DEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLS-DSFSWVFSPATKELYITSMEIEKMDGSGNEDNTGDE

Query:  FYSVQ-SFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDE-------DLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI
        F SV+ SF  CC +  + E + + +  FSR SSL GL   ++       ++K+ +++QE  HC+GWPFGL RKA LLPPLPKSP+ESWSW K T++
Subjt:  FYSVQ-SFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDE-------DLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKI

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCCAGGAAATGCTTTCTAGCAGGTGCTTTGAAGGATGCATTCTGCAACTGCCATACTTTTGGCAAACCACTACC
AAATTCTAACGACGAGGACGAATATCCTACGAGTGACTTTGATGATGAAGAGGAAGAAATTGTATCAGAAATCAGAAGTCGAGCACTGGAAAAGTTGAAACGAAAGATTA
ACCTGTCAGACAGCTTTTCCTGGGTTTTCTCACCTGCAACCAAAGAATTGTATATTACTTCAATGGAGATAGAGAAGATGGATGGATCTGGAAATGAAGATAACACAGGA
GATGAATTCTACTCTGTTCAGAGTTTTCTCACATGTTGTTCAACTGCAGCAACAAATGAAGCATTCTTTTCTGTGGAGGCCAACTTTTCCCGATGTTCGAGCTTAAATGG
TCTTAATTTTCTAGATGAAGATCTCAAGAGGCGCGCCATCTTGCAGGAAGTTTTCCATTGTGAAGGATGGCCATTCGGTCTTTGCAGGAAGGCAGTGTTACTTCCACCTC
TGCCCAAGTCGCCATCTGAATCTTGGTCATGGAGTAAAGGCACCAAAATTGTAAAGACATATTGA

mRNA sequence

Show/hide mRNA sequence

TAAAAAACGTTATTTTCAATAAGATGTGAAGGCACTGTCAAAAATAGAGCCATTTTGAACCCTAAAGTCAAGAAGCAGTAAGGGGGAAGTAATTCTTTATATAGTTCACT
GGCTCATAAACCAACCAGGAAATCTTGCTTCTCCAATATGGGGGTCTTTTATCAAGAAGACCCACCAAATCCTTCCAGGAAATGCTTTCTAGCAGGTGCTTTGAAGGATG
CATTCTGCAACTGCCATACTTTTGGCAAACCACTACCAAATTCTAACGACGAGGACGAATATCCTACGAGTGACTTTGATGATGAAGAGGAAGAAATTGTATCAGAAATC
AGAAGTCGAGCACTGGAAAAGTTGAAACGAAAGATTAACCTGTCAGACAGCTTTTCCTGGGTTTTCTCACCTGCAACCAAAGAATTGTATATTACTTCAATGGAGATAGA
GAAGATGGATGGATCTGGAAATGAAGATAACACAGGAGATGAATTCTACTCTGTTCAGAGTTTTCTCACATGTTGTTCAACTGCAGCAACAAATGAAGCATTCTTTTCTG
TGGAGGCCAACTTTTCCCGATGTTCGAGCTTAAATGGTCTTAATTTTCTAGATGAAGATCTCAAGAGGCGCGCCATCTTGCAGGAAGTTTTCCATTGTGAAGGATGGCCA
TTCGGTCTTTGCAGGAAGGCAGTGTTACTTCCACCTCTGCCCAAGTCGCCATCTGAATCTTGGTCATGGAGTAAAGGCACCAAAATTGTAAAGACATATTGATGTCCGAA
TACAGTGCCAAGTTCTGTTTTCGTATTTTGCTTCTGCCCGCAGCAATGTTGGGATTGAAGAGTCCGACATAGCTCCCTTGCCTTGGTAACGAAATTCATCAAGCTATTGA
TCTGATTAAATCCAACTTTCAACTCTTATTTACTTTGTAAACATATGTTTTAACCGTCTGAGCTATTTACCGCTAATACGCAGTTACTGTAGCAATAGTCACAGTTAAGG
TTGCCCCCTCCGCAGATCACACAGAACTCTATAGTAACTCATAAATGCAAAAACTAGAAACTGATGATATAAACTTGTAAAAGAAACTTCTCATAAATTAAATAAATAAA
TAAAGGTAAAAGGAACCCAATAATTGGCAAACAAGCAAGGATGTTAAATTCTGAAAACTCATTTGTCGATGTGAGAGCTTATTCAATTGCCACTAATTCCACGTTAATTG
GTTTTGAGAGAAGATAGACAATAAAACATTGAAGAACATACACCC

Protein sequence

Show/hide protein sequence

MGVFYQEDPPNPSRKCFLAGALKDAFCNCHTFGKPLPNSNDEDEYPTSDFDDEEEEIVSEIRSRALEKLKRKINLSDSFSWVFSPATKELYITSMEIEKMDGSGNEDNTG
DEFYSVQSFLTCCSTAATNEAFFSVEANFSRCSSLNGLNFLDEDLKRRAILQEVFHCEGWPFGLCRKAVLLPPLPKSPSESWSWSKGTKIVKTY

Lsi08G014530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome