; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G014600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G014600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncalmodulin-like
Genome locationchr08:22747859..22750912
RNA-Seq ExpressionLsi08G014600
SyntenyLsi08G014600
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152801.1 probable calcium-binding protein CML11 [Cucumis sativus]4.9e-6276.27Show/hide
Query:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV
        MSVS +QAWA+NEANELIKKYDRNGDGVLTKEEL SFL D R STQLNN R  SS T PKTN+NLA K++SNT + PK QL DKAQ SS      KQSNV
Subjt:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV

Query:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK
         LSREQIKEIFKYHDS+KDGFL+IRELTKAF S+GS VPF KARY M YAD D+DGL+SE ELDKLIDYA KIIKKK
Subjt:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK

XP_008445564.1 PREDICTED: probable calcium-binding protein CML11 [Cucumis melo]4.7e-5772.88Show/hide
Query:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV
        MSVS +QAWA+ EA+ELIKKYDRNGDGVLTKEEL SFLHD R    L N RF SS T PKTN+NL  K++SNT + PK QL DKAQ+S       +QSNV
Subjt:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV

Query:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK
         LSREQIKEIFKYHDS+KDGFL+IRELTKAFGSLGS VPF KAR+ M YAD D+DGLISE EL KLIDYA KIIKKK
Subjt:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK

XP_022951742.1 probable calcium-binding protein CML11 [Cucurbita moschata]3.4e-5570.06Show/hide
Query:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV
        MSVS +QAWAEN+ANELIKKYD+NGDGVLTKEEL  FL D R STQLNN  F S    P+TND  A+KL SN   NPK Q++ KA  SS K L  K SNV
Subjt:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV

Query:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK
         LSREQIK+IFKY+DSDKDGFLNIRE+TKAF  LGS  PF KA+Y M +ADA+ DGLISE EL+KLIDYA KIIKKK
Subjt:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK

XP_023002691.1 probable calcium-binding protein CML11 [Cucurbita maxima]8.9e-5670.06Show/hide
Query:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV
        MSVS +Q WAENEANEL+KKYD+NGDG+LTKEEL  FL D R STQLN   F S    PKTND  A+KL+SNT  NPK Q++DK   SS K L  K SNV
Subjt:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV

Query:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK
        SLSREQIK+IFKY+DSDKDGFLNIRE+TKAF  LGS  PF KA+Y M +ADA+ DGLISE EL+KLIDYA KIIKKK
Subjt:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK

XP_038886759.1 probable calcium-binding protein CML11 [Benincasa hispida]2.7e-6879.66Show/hide
Query:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV
        MSVSQ+QAWAENEANELIKKYDRNGDGVL KEEL SFLHDT  STQLNN+R   S+  PKTN+NL +KL+SNT MN K QLRDK QNSS K LDRKQSN+
Subjt:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV

Query:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK
          SREQIKEIFKYHDS+KDGFLNIRELTK FGSLGS +PF KA Y M YADADKDGLISEVELD+LIDY  KIIKKK
Subjt:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK

TrEMBL top hitse value%identityAlignment
A0A0A0LRC8 Uncharacterized protein2.3e-6276.27Show/hide
Query:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV
        MSVS +QAWA+NEANELIKKYDRNGDGVLTKEEL SFL D R STQLNN R  SS T PKTN+NLA K++SNT + PK QL DKAQ SS      KQSNV
Subjt:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV

Query:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK
         LSREQIKEIFKYHDS+KDGFL+IRELTKAF S+GS VPF KARY M YAD D+DGL+SE ELDKLIDYA KIIKKK
Subjt:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK

A0A1S3BDW2 probable calcium-binding protein CML112.3e-5772.88Show/hide
Query:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV
        MSVS +QAWA+ EA+ELIKKYDRNGDGVLTKEEL SFLHD R    L N RF SS T PKTN+NL  K++SNT + PK QL DKAQ+S       +QSNV
Subjt:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV

Query:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK
         LSREQIKEIFKYHDS+KDGFL+IRELTKAFGSLGS VPF KAR+ M YAD D+DGLISE EL KLIDYA KIIKKK
Subjt:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK

A0A5A7V4R9 Putative calcium-binding protein CML112.3e-5772.88Show/hide
Query:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV
        MSVS +QAWA+ EA+ELIKKYDRNGDGVLTKEEL SFLHD R    L N RF SS T PKTN+NL  K++SNT + PK QL DKAQ+S       +QSNV
Subjt:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV

Query:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK
         LSREQIKEIFKYHDS+KDGFL+IRELTKAFGSLGS VPF KAR+ M YAD D+DGLISE EL KLIDYA KIIKKK
Subjt:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK

A0A6J1GII5 probable calcium-binding protein CML111.6e-5570.06Show/hide
Query:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV
        MSVS +QAWAEN+ANELIKKYD+NGDGVLTKEEL  FL D R STQLNN  F S    P+TND  A+KL SN   NPK Q++ KA  SS K L  K SNV
Subjt:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV

Query:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK
         LSREQIK+IFKY+DSDKDGFLNIRE+TKAF  LGS  PF KA+Y M +ADA+ DGLISE EL+KLIDYA KIIKKK
Subjt:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK

A0A6J1KM01 probable calcium-binding protein CML114.3e-5670.06Show/hide
Query:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV
        MSVS +Q WAENEANEL+KKYD+NGDG+LTKEEL  FL D R STQLN   F S    PKTND  A+KL+SNT  NPK Q++DK   SS K L  K SNV
Subjt:  MSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNV

Query:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK
        SLSREQIK+IFKY+DSDKDGFLNIRE+TKAF  LGS  PF KA+Y M +ADA+ DGLISE EL+KLIDYA KIIKKK
Subjt:  SLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYAIKIIKKK

SwissProt top hitse value%identityAlignment
O22845 Calmodulin-like protein 58.2e-0424.84Show/hide
Query:  NEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNVSLSREQIKEIF
        +E   + + +D+NGDG +TKEEL   L         N   +   K   +    + +K+ +N          D+ ++  +  +D   ++     E +K+ F
Subjt:  NEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNVSLSREQIKEIF

Query:  KYHDSDKDGFLNIRELTKAFGSLG--SGVPFNKARYGMIYADADKDGLISEVE
           D D DGF+ + EL     SLG   G   +  +  ++  DAD DG ++  E
Subjt:  KYHDSDKDGFLNIRELTKAFGSLG--SGVPFNKARYGMIYADADKDGLISEVE

Q9LQN4 Probable calcium-binding protein CML177.4e-0527.67Show/hide
Query:  NEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNVSLSREQIKEIF
        NE  E+ + +DRN DG LT+ EL S L            R    K  P   + L  K  ++T  N   +  +     S + L   +     + EQ+  +F
Subjt:  NEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNVSLSREQIKEIF

Query:  KYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYA
        +  D+D +GF+   EL  +   LG  +   +    +  AD+D DG I+  E  K I+ A
Subjt:  KYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYA

Arabidopsis top hitse value%identityAlignment
AT1G32250.1 Calcium-binding EF-hand family protein5.3e-0627.67Show/hide
Query:  NEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNVSLSREQIKEIF
        NE  E+ + +DRN DG LT+ EL S L            R    K  P   + L  K  ++T  N   +  +     S + L   +     + EQ+  +F
Subjt:  NEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNVSLSREQIKEIF

Query:  KYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYA
        +  D+D +GF+   EL  +   LG  +   +    +  AD+D DG I+  E  K I+ A
Subjt:  KYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGMIYADADKDGLISEVELDKLIDYA

AT2G43290.1 Calcium-binding EF-hand family protein5.8e-0524.84Show/hide
Query:  NEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNVSLSREQIKEIF
        +E   + + +D+NGDG +TKEEL   L         N   +   K   +    + +K+ +N          D+ ++  +  +D   ++     E +K+ F
Subjt:  NEANELIKKYDRNGDGVLTKEELPSFLHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNVSLSREQIKEIF

Query:  KYHDSDKDGFLNIRELTKAFGSLG--SGVPFNKARYGMIYADADKDGLISEVE
           D D DGF+ + EL     SLG   G   +  +  ++  DAD DG ++  E
Subjt:  KYHDSDKDGFLNIRELTKAFGSLG--SGVPFNKARYGMIYADADKDGLISEVE

AT4G12860.1 EF hand calcium-binding protein family6.4e-0427.45Show/hide
Query:  EANELIKKYDRNSDGVLTKEEIQSFLHDAGCSTQLDNLKFVSSKKGFQTYNTSGIILISLRMSVSQ---IQAWAENEANELIKKYDRNGDGVLTKEELPS
        E + + + +D+N DG + K E++ F    G     + +  + +K      N  G + I    S+ Q    +   E +  E  + +D+NGDG +T EEL S
Subjt:  EANELIKKYDRNSDGVLTKEEIQSFLHDAGCSTQLDNLKFVSSKKGFQTYNTSGIILISLRMSVSQ---IQAWAENEANELIKKYDRNGDGVLTKEELPS

Query:  FL
         L
Subjt:  FL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCCTCCCAACTTCAAGCTTGGGCTGAGAATGAAGCAAATGAATTGATAAAGAAGTATGATAGAAATAGTGATGGTGTTCTCACTAAAGAAGAGATACAATCTTT
CCTCCACGACGCTGGTTGTTCAACTCAACTCGACAATCTAAAGTTTGTGTCATCTAAGAAAGGTTTCCAAACTTATAATACTTCGGGTATTATTCTTATTAGTTTAAGAA
TGTCGGTCTCCCAAATTCAAGCTTGGGCTGAGAATGAAGCAAATGAATTGATAAAGAAGTATGATAGAAATGGTGATGGTGTTCTCACTAAAGAAGAGCTACCATCTTTT
CTCCATGACACTCGTTGTTCAACTCAACTCAACAATTCAAGGTTTACATCATCTAAGACGTTCCCAAAAACTAACGATAATCTTGCATACAAGCTTACCTCAAACACTCC
TATGAACCCAAAAGACCAGTTGCGAGACAAAGCTCAAAATTCCTCAGCAAAATTTCTTGATAGAAAGCAATCTAATGTGTCTTTGAGTCGAGAGCAGATAAAAGAGATTT
TTAAATATCATGACAGTGACAAAGATGGTTTTCTCAACATACGGGAGTTAACAAAAGCTTTCGGTTCTCTAGGCTCAGGTGTCCCATTCAACAAAGCTCGCTATGGTATG
ATTTATGCTGATGCTGATAAAGATGGTCTTATTAGTGAGGTCGAACTTGACAAACTCATCGATTATGCCATTAAAATCATCAAGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCCTCCCAACTTCAAGCTTGGGCTGAGAATGAAGCAAATGAATTGATAAAGAAGTATGATAGAAATAGTGATGGTGTTCTCACTAAAGAAGAGATACAATCTTT
CCTCCACGACGCTGGTTGTTCAACTCAACTCGACAATCTAAAGTTTGTGTCATCTAAGAAAGGTTTCCAAACTTATAATACTTCGGGTATTATTCTTATTAGTTTAAGAA
TGTCGGTCTCCCAAATTCAAGCTTGGGCTGAGAATGAAGCAAATGAATTGATAAAGAAGTATGATAGAAATGGTGATGGTGTTCTCACTAAAGAAGAGCTACCATCTTTT
CTCCATGACACTCGTTGTTCAACTCAACTCAACAATTCAAGGTTTACATCATCTAAGACGTTCCCAAAAACTAACGATAATCTTGCATACAAGCTTACCTCAAACACTCC
TATGAACCCAAAAGACCAGTTGCGAGACAAAGCTCAAAATTCCTCAGCAAAATTTCTTGATAGAAAGCAATCTAATGTGTCTTTGAGTCGAGAGCAGATAAAAGAGATTT
TTAAATATCATGACAGTGACAAAGATGGTTTTCTCAACATACGGGAGTTAACAAAAGCTTTCGGTTCTCTAGGCTCAGGTGTCCCATTCAACAAAGCTCGCTATGGTATG
ATTTATGCTGATGCTGATAAAGATGGTCTTATTAGTGAGGTCGAACTTGACAAACTCATCGATTATGCCATTAAAATCATCAAGAAGAAATGA
Protein sequenceShow/hide protein sequence
MSASQLQAWAENEANELIKKYDRNSDGVLTKEEIQSFLHDAGCSTQLDNLKFVSSKKGFQTYNTSGIILISLRMSVSQIQAWAENEANELIKKYDRNGDGVLTKEELPSF
LHDTRCSTQLNNSRFTSSKTFPKTNDNLAYKLTSNTPMNPKDQLRDKAQNSSAKFLDRKQSNVSLSREQIKEIFKYHDSDKDGFLNIRELTKAFGSLGSGVPFNKARYGM
IYADADKDGLISEVELDKLIDYAIKIIKKK