; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G014610 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G014610
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncalcium-binding protein-like
Genome locationchr08:22761158..22761646
RNA-Seq ExpressionLsi08G014610
SyntenyLsi08G014610
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152802.1 calcium-binding protein [Cucumis sativus]1.3e-4766.06Show/hide
Query:  MSTNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEK---GPLKLRFSRDDLREIFLE
        MSTN L+ Q V  + NYMSE+EA++LI+KYDKNGDSILTK+ELTALII+QAA+   QQ KP+K E      KV   DEK   GP K+R S+D++REIFLE
Subjt:  MSTNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEK---GPLKLRFSRDDLREIFLE

Query:  HDIDGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLKK
        HDIDGDGYL RSEL+KAFNMCGS++SF+KANYALNLADA+GDG I L EL+KVL+YA+++ N  K
Subjt:  HDIDGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLKK

XP_008445563.1 PREDICTED: calcium-binding protein-like [Cucumis melo]3.4e-4867.48Show/hide
Query:  MSTNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKV-EAKDEKGPLKLRFSRDDLREIFLEHD
        MSTNAL    V  + NYMSE+EAN+LI+KYDKNGDSILTK+ELTALI++QAA+   QQ KP+K E    P+KV + K   GP K+R SRD++REIFLEHD
Subjt:  MSTNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKV-EAKDEKGPLKLRFSRDDLREIFLEHD

Query:  IDGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLKK
        IDGDG+L RSELIKAFNMCGS +SF+KANYALNLADADGD  I++ ELEKVLDYA+++ N  K
Subjt:  IDGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLKK

XP_022951880.1 calmodulin-like [Cucurbita moschata]1.9e-3560.54Show/hide
Query:  YMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAK--DEKGPLKLRFSRDDLREIFLEHDIDGDGYLNRSELIKA
        YMSE +AN+LI+KYDKNGDSILTK+ELTA+I++QA+    QQQ P K +++CKP+K  AK  ++KG L +R SR ++R+IFLEHDIDGDGYLN SEL KA
Subjt:  YMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAK--DEKGPLKLRFSRDDLREIFLEHDIDGDGYLNRSELIKA

Query:  FNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLK
        F+  GS     KA+Y LN ADADGDG I+  ELEK++DYAE+++  K
Subjt:  FNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLK

XP_023002889.1 calmodulin-A-like [Cucurbita maxima]1.2e-3460.54Show/hide
Query:  YMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAK--DEKGPLKLRFSRDDLREIFLEHDIDGDGYLNRSELIKA
        YMSE +AN+LI+KYDKNGDSILTK+ELTA+I++QA+   QQQ  PK  +V+CKP+K  AK  ++KG L +R SR ++R+IFLEHDIDGDGYLN SEL KA
Subjt:  YMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAK--DEKGPLKLRFSRDDLREIFLEHDIDGDGYLNRSELIKA

Query:  FNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLK
        F+  GS     KA+Y LN ADADGDG I+  EL K++DYAE+++  K
Subjt:  FNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLK

XP_038885758.1 calmodulin-like protein 3 [Benincasa hispida]5.7e-5676.36Show/hide
Query:  MSTNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAK---DEKGPLKLRFSRDDLREIFLE
        MSTN L   +  G  NYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAA+    Q KPKKEEV+CKPQKVEAK   DEKGP K+R +RD++REIFLE
Subjt:  MSTNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAK---DEKGPLKLRFSRDDLREIFLE

Query:  HDIDGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLKK
        HDIDGDG+L RSEL KA   CGS  S +KANYALNLADADGDGLIN+ ELEKVLDY EKLN LKK
Subjt:  HDIDGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLKK

TrEMBL top hitse value%identityAlignment
A0A0A0LNG6 Uncharacterized protein6.2e-4866.06Show/hide
Query:  MSTNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEK---GPLKLRFSRDDLREIFLE
        MSTN L+ Q V  + NYMSE+EA++LI+KYDKNGDSILTK+ELTALII+QAA+   QQ KP+K E      KV   DEK   GP K+R S+D++REIFLE
Subjt:  MSTNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEK---GPLKLRFSRDDLREIFLE

Query:  HDIDGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLKK
        HDIDGDGYL RSEL+KAFNMCGS++SF+KANYALNLADA+GDG I L EL+KVL+YA+++ N  K
Subjt:  HDIDGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLKK

A0A1S3BDQ7 calcium-binding protein-like1.6e-4867.48Show/hide
Query:  MSTNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKV-EAKDEKGPLKLRFSRDDLREIFLEHD
        MSTNAL    V  + NYMSE+EAN+LI+KYDKNGDSILTK+ELTALI++QAA+   QQ KP+K E    P+KV + K   GP K+R SRD++REIFLEHD
Subjt:  MSTNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKV-EAKDEKGPLKLRFSRDDLREIFLEHD

Query:  IDGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLKK
        IDGDG+L RSELIKAFNMCGS +SF+KANYALNLADADGD  I++ ELEKVLDYA+++ N  K
Subjt:  IDGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLKK

A0A5A7V211 Calcium-binding protein-like1.6e-4867.48Show/hide
Query:  MSTNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKV-EAKDEKGPLKLRFSRDDLREIFLEHD
        MSTNAL    V  + NYMSE+EAN+LI+KYDKNGDSILTK+ELTALI++QAA+   QQ KP+K E    P+KV + K   GP K+R SRD++REIFLEHD
Subjt:  MSTNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKV-EAKDEKGPLKLRFSRDDLREIFLEHD

Query:  IDGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLKK
        IDGDG+L RSELIKAFNMCGS +SF+KANYALNLADADGD  I++ ELEKVLDYA+++ N  K
Subjt:  IDGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLKK

A0A6J1GK54 calmodulin-like9.3e-3660.54Show/hide
Query:  YMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAK--DEKGPLKLRFSRDDLREIFLEHDIDGDGYLNRSELIKA
        YMSE +AN+LI+KYDKNGDSILTK+ELTA+I++QA+    QQQ P K +++CKP+K  AK  ++KG L +R SR ++R+IFLEHDIDGDGYLN SEL KA
Subjt:  YMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAK--DEKGPLKLRFSRDDLREIFLEHDIDGDGYLNRSELIKA

Query:  FNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLK
        F+  GS     KA+Y LN ADADGDG I+  ELEK++DYAE+++  K
Subjt:  FNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLK

A0A6J1KRR4 calmodulin-A-like6.0e-3560.54Show/hide
Query:  YMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAK--DEKGPLKLRFSRDDLREIFLEHDIDGDGYLNRSELIKA
        YMSE +AN+LI+KYDKNGDSILTK+ELTA+I++QA+   QQQ  PK  +V+CKP+K  AK  ++KG L +R SR ++R+IFLEHDIDGDGYLN SEL KA
Subjt:  YMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAK--DEKGPLKLRFSRDDLREIFLEHDIDGDGYLNRSELIKA

Query:  FNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLK
        F+  GS     KA+Y LN ADADGDG I+  EL K++DYAE+++  K
Subjt:  FNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLK

SwissProt top hitse value%identityAlignment
O94739 Calmodulin5.3e-0429.86Show/hide
Query:  KEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEKGPL-----------KLR--FSRDDLREIFLEHDIDGDGYLN
        KEA SL   +DK+GD  +T +EL  ++       +   Q P + E+     +V+A D  G +           K+R   S ++++E F   D DG+GY++
Subjt:  KEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEKGPL-----------KLR--FSRDDLREIFLEHDIDGDGYLN

Query:  RSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVL
         +EL       G   + N+ +  +  AD DGDG IN  E  K++
Subjt:  RSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVL

P11120 Calmodulin6.9e-0429.86Show/hide
Query:  KEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEKGPL-----------KLR--FSRDDLREIFLEHDIDGDGYLN
        KEA SL   +DK+GD  +T +EL  ++       +   Q P + E+     +V+A D  G +           K+R   S ++++E F   D DG+GY++
Subjt:  KEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEKGPL-----------KLR--FSRDDLREIFLEHDIDGDGYLN

Query:  RSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVL
         +EL       G   + N+ +  +  AD DGDG IN  E  K++
Subjt:  RSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVL

Q9HFY6 Calmodulin1.8e-0429.86Show/hide
Query:  KEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEKG-------------PLKLRFSRDDLREIFLEHDIDGDGYLN
        KEA SL   +DK+GD  +T +EL  ++       +   Q P + E+L    +V+A D  G              +K   S ++++E F   D DG+GY++
Subjt:  KEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEKG-------------PLKLRFSRDDLREIFLEHDIDGDGYLN

Query:  RSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVL
         +EL       G   S ++    +  AD DGDG IN  E  K++
Subjt:  RSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVL

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein3.2e-0423.9Show/hide
Query:  STNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEKGPL-KLRFSRDDLREIFLEHDI
        S N    +      +  + +E   +  ++D NGD  ++  EL  +      +  + +     EEV          DE   L +   S  ++R+ F  +D 
Subjt:  STNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEKGPL-KLRFSRDDLREIFLEHDI

Query:  DGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNN
        D +G ++ SEL +  N  G   S       +   DADGDG +N  E +K++  +  LN+
Subjt:  DGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNN

AT1G18210.2 Calcium-binding EF-hand family protein3.2e-0423.9Show/hide
Query:  STNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEKGPL-KLRFSRDDLREIFLEHDI
        S N    +      +  + +E   +  ++D NGD  ++  EL  +      +  + +     EEV          DE   L +   S  ++R+ F  +D 
Subjt:  STNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEKGPL-KLRFSRDDLREIFLEHDI

Query:  DGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNN
        D +G ++ SEL +  N  G   S       +   DADGDG +N  E +K++  +  LN+
Subjt:  DGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNN

AT1G76640.1 Calcium-binding EF-hand family protein8.4e-0536.84Show/hide
Query:  DLREIFLEHDIDGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHE
        DL  +F   D + DG ++  EL K+F   G   S  +A  A+ L+D DGDG+++++E
Subjt:  DLREIFLEHDIDGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHE

AT2G15680.1 Calcium-binding EF-hand family protein2.9e-0533.87Show/hide
Query:  DLREIFLEHDIDGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVL
        D+R  F   D++GDG ++  E++      G   S    N  +   DADGDGL+N+ E  K++
Subjt:  DLREIFLEHDIDGDGYLNRSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVL

AT5G21274.1 calmodulin 67.1e-0429.17Show/hide
Query:  KEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEKG-------------PLKLRFSRDDLREIFLEHDIDGDGYLN
        KEA SL   +DK+GD  +T +EL  ++       +   Q P + E+     +V+A D  G              +K   S ++L+E F   D D +G+++
Subjt:  KEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEKG-------------PLKLRFSRDDLREIFLEHDIDGDGYLN

Query:  RSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVL
         +EL       G   S  + +  +  AD DGDG IN  E  KV+
Subjt:  RSELIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACAAATGCTCTTCAGTGTCAGCAAGTGACAGGCAAAGCAAATTATATGAGTGAAAAAGAAGCAAATAGTTTGATCCAAAAATATGACAAGAATGGGGATTCAAT
CCTCACAAAGGAAGAGCTAACAGCTTTGATAATTGATCAAGCAGCTGCTTCTCAACAACAACAACAAAAACCAAAGAAAGAAGAAGTTTTGTGCAAACCTCAAAAAGTTG
AAGCTAAGGATGAGAAGGGACCATTGAAGCTGAGGTTTAGTAGAGATGATTTAAGGGAGATCTTCTTAGAGCATGATATTGATGGTGATGGTTACCTCAACAGAAGTGAG
CTAATCAAAGCTTTTAATATGTGTGGTTCCTGGTCTTCATTTAACAAAGCTAACTATGCTTTAAACTTGGCTGATGCTGATGGAGATGGCCTTATTAATCTGCATGAACT
TGAAAAAGTACTTGATTATGCTGAAAAACTCAACAACCTCAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACAAATGCTCTTCAGTGTCAGCAAGTGACAGGCAAAGCAAATTATATGAGTGAAAAAGAAGCAAATAGTTTGATCCAAAAATATGACAAGAATGGGGATTCAAT
CCTCACAAAGGAAGAGCTAACAGCTTTGATAATTGATCAAGCAGCTGCTTCTCAACAACAACAACAAAAACCAAAGAAAGAAGAAGTTTTGTGCAAACCTCAAAAAGTTG
AAGCTAAGGATGAGAAGGGACCATTGAAGCTGAGGTTTAGTAGAGATGATTTAAGGGAGATCTTCTTAGAGCATGATATTGATGGTGATGGTTACCTCAACAGAAGTGAG
CTAATCAAAGCTTTTAATATGTGTGGTTCCTGGTCTTCATTTAACAAAGCTAACTATGCTTTAAACTTGGCTGATGCTGATGGAGATGGCCTTATTAATCTGCATGAACT
TGAAAAAGTACTTGATTATGCTGAAAAACTCAACAACCTCAAGAAATGA
Protein sequenceShow/hide protein sequence
MSTNALQCQQVTGKANYMSEKEANSLIQKYDKNGDSILTKEELTALIIDQAAASQQQQQKPKKEEVLCKPQKVEAKDEKGPLKLRFSRDDLREIFLEHDIDGDGYLNRSE
LIKAFNMCGSWSSFNKANYALNLADADGDGLINLHELEKVLDYAEKLNNLKK