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Lsi08G014620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G014620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncalmodulin-like
Genome locationchr08:22770571..22770834
RNA-Seq ExpressionLsi08G014620
SyntenyLsi08G014620
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060886.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]3.3e-3491.36Show/hide
Query:  MACRGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEK
        MA  GVSK +FSREEMKEIFREHDIDGDGYLSI ELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDY E+
Subjt:  MACRGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEK

KAA0060892.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]7.9e-2870.24Show/hide
Query:  RGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKKR
        R  SKL  SRE++KEIFREHDIDGDG LS+SE++KA GF G  +PFYKAHYGMA++DENGDG I E+ELDKL+DY EKFQ+K++
Subjt:  RGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKKR

KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]1.7e-2564.29Show/hide
Query:  RGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKKR
        R  ++L  SRE++KEIFREHDIDGDG LS++E++KA G  G  +PFYKAHYGMA++DENGDG I E+ELDKL+DY +KFQ+K++
Subjt:  RGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKKR

KGN62525.1 hypothetical protein Csa_022453 [Cucumis sativus]4.6e-3688.51Show/hide
Query:  MACRGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKKR
        MA  GVSK +FSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAY DENGDGLISEDELDKLIDY E+FQ ++R
Subjt:  MACRGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKKR

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]8.2e-2565.43Show/hide
Query:  SKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKKR
        ++L  SRE++KEIFREHDIDGDG LS++E++KA G  G  +PFYKAHYGMA++DENGDG I E+ELDKL+DY +KFQ+K++
Subjt:  SKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKKR

TrEMBL top hitse value%identityAlignment
A0A0A0LKX1 Uncharacterized protein2.2e-3688.51Show/hide
Query:  MACRGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKKR
        MA  GVSK +FSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAY DENGDGLISEDELDKLIDY E+FQ ++R
Subjt:  MACRGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKKR

A0A0A0LRC1 Uncharacterized protein8.0e-2664.29Show/hide
Query:  RGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKKR
        R  ++L  SRE++KEIFREHDIDGDG LS++E++KA G  G  +PFYKAHYGMA++DENGDG I E+ELDKL+DY +KFQ+K++
Subjt:  RGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKKR

A0A5A7UYC0 Putative calcium-binding protein CML103.8e-2870.24Show/hide
Query:  RGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKKR
        R  SKL  SRE++KEIFREHDIDGDG LS+SE++KA GF G  +PFYKAHYGMA++DENGDG I E+ELDKL+DY EKFQ+K++
Subjt:  RGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKKR

A0A5A7V2Z9 Putative calcium-binding protein CML101.6e-3491.36Show/hide
Query:  MACRGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEK
        MA  GVSK +FSREEMKEIFREHDIDGDGYLSI ELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDY E+
Subjt:  MACRGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEK

A0A6J1CSH1 probable calcium-binding protein CML152.8e-2368.35Show/hide
Query:  KLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKK
        K+ FSR ++KEIF EHDIDGDG LS+SELIKA  FLG  IP YKAHYG+A++D++GDGLISE+ELDKL+DY EK   +K
Subjt:  KLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKK

SwissProt top hitse value%identityAlignment
P84339 Calmodulin2.8e-0436.92Show/hide
Query:  SREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLI
        S EE+KE F+  D DG+GY+S +EL   M  LG  +   +    +  +D +GDG I+ +E  K++
Subjt:  SREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLI

Q5ZD81 Probable calcium-binding protein CML121.5e-0538.71Show/hide
Query:  EMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLI
        E+ E FR  D DG+G++S +EL ++M  +GH I + +    M  +D +GDGLIS +E   ++
Subjt:  EMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLI

Q8X187 Calmodulin9.8e-0538.46Show/hide
Query:  SREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLI
        S EE+KE F+  D DG+GY+S +EL   M  LG  +   +    +  +D +GDG I+ DE  K++
Subjt:  SREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLI

Q9FZ75 Probable calcium-binding protein CML152.2e-0434.92Show/hide
Query:  EEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLI
        E++ EIF+  D DG+G++S +EL  AM  +G  + + +    +  +D NGDG+IS  E   ++
Subjt:  EEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLI

Q9M8U1 Probable calcium-binding protein CML182.2e-0433.33Show/hide
Query:  KLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLI
        K  ++ +++K IFR  D DG+GY++ +EL  +M  LGH++   +    +  +D +GDG I   E  + I
Subjt:  KLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLI

Arabidopsis top hitse value%identityAlignment
AT1G18530.1 EF hand calcium-binding protein family1.5e-0534.92Show/hide
Query:  EEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLI
        E++ EIF+  D DG+G++S +EL  AM  +G  + + +    +  +D NGDG+IS  E   ++
Subjt:  EEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLI

AT1G24620.1 EF hand calcium-binding protein family3.4e-0534.43Show/hide
Query:  EMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKL
        E++ +F++ D++GDG +S  EL   M  LGH +P  +    +   D  GDG I+ +E  +L
Subjt:  EMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKL

AT1G32250.1 Calcium-binding EF-hand family protein2.6e-0531.34Show/hide
Query:  FSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLID
        ++ E++  +FR  D DG+G+++ +EL  +M  LGH++   +    +  +D +GDG I+  E  K I+
Subjt:  FSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLID

AT3G03000.1 EF hand calcium-binding protein family1.5e-0533.33Show/hide
Query:  KLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLI
        K  ++ +++K IFR  D DG+GY++ +EL  +M  LGH++   +    +  +D +GDG I   E  + I
Subjt:  KLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLI

AT4G14640.1 calmodulin 85.9e-0535.38Show/hide
Query:  SREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLI
        + EE+KE F+  D D +GY+S SEL   M  LG  +   +    +  +D +GDG ++ DE  K++
Subjt:  SREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGTCGTGGTGTAAGCAAGCTCCATTTCTCCAGGGAAGAGATGAAGGAAATCTTTCGAGAGCACGACATCGACGGAGACGGTTATCTCAGCATCAGTGAGCTCAT
CAAAGCCATGGGGTTCTTAGGTCACTCTATACCATTCTACAAAGCTCACTACGGTATGGCTTATTCTGATGAGAATGGCGATGGCCTCATTTCAGAAGACGAGCTTGACA
AACTCATCGATTATGTCGAGAAGTTTCAGTACAAAAAGCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTGTCGTGGTGTAAGCAAGCTCCATTTCTCCAGGGAAGAGATGAAGGAAATCTTTCGAGAGCACGACATCGACGGAGACGGTTATCTCAGCATCAGTGAGCTCAT
CAAAGCCATGGGGTTCTTAGGTCACTCTATACCATTCTACAAAGCTCACTACGGTATGGCTTATTCTGATGAGAATGGCGATGGCCTCATTTCAGAAGACGAGCTTGACA
AACTCATCGATTATGTCGAGAAGTTTCAGTACAAAAAGCGTTAA
Protein sequenceShow/hide protein sequence
MACRGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGLISEDELDKLIDYVEKFQYKKR