; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G014660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G014660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEF hand calcium-binding protein family
Genome locationchr08:22797390..22801316
RNA-Seq ExpressionLsi08G014660
SyntenyLsi08G014660
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060893.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]6.0e-3280.22Show/hide
Query:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII
        MTR  +DKKK G  L+KEEMK IFREHDFNGDGRLSIKELSR FGS GAFFPLYRA  GLF+AD+DGDGFI+EQELEKV+DYAIKCKYN++
Subjt:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII

KAG6585659.1 hypothetical protein SDJN03_18392, partial [Cucurbita argyrosperma subsp. sororia]3.7e-2670Show/hide
Query:  MTRKHDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII
        M  K+ KK     L +EE+KAIF+EHDFNGDGRLSI+ELSR FG LGAF PLYRA  G+ IAD +GDG+ITE EL+KV+DYAIKCKYNII
Subjt:  MTRKHDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII

KGN62515.1 hypothetical protein Csa_022644 [Cucumis sativus]6.6e-3176.92Show/hide
Query:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII
        MTR+ +DKKK G  L+KEEMK +FREHDFNGDGRLSIKELSR FG  GAFFPLYRA  GLF+AD+DGDGFI+EQEL+KV+DYAIKCKYN++
Subjt:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]2.6e-2777.65Show/hide
Query:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIK
        MTR+ +DKKK G  L+KEEMK +FREHDFNGDGRLSIKELSR FG  GAFFPLYRA  GLF+AD+DGDGFI+EQEL+KV+DYAIK
Subjt:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIK

XP_022144349.1 calmodulin-like protein 5 [Momordica charantia]5.8e-2770Show/hide
Query:  MTRKHDKKKPGLE--KEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII
        MT K  KKKP ++  +EE+KAIFR HD NGDG LSIKELSR FGSLGA  PLYRA CG+  AD DGDG IT++ELEKV+DYA+KCKY+II
Subjt:  MTRKHDKKKPGLE--KEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII

TrEMBL top hitse value%identityAlignment
A0A0A0LKW4 Uncharacterized protein3.2e-3176.92Show/hide
Query:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII
        MTR+ +DKKK G  L+KEEMK +FREHDFNGDGRLSIKELSR FG  GAFFPLYRA  GLF+AD+DGDGFI+EQEL+KV+DYAIKCKYN++
Subjt:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII

A0A5A7UY46 Putative calcium-binding protein CML102.9e-3280.22Show/hide
Query:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII
        MTR  +DKKK G  L+KEEMK IFREHDFNGDGRLSIKELSR FGS GAFFPLYRA  GLF+AD+DGDGFI+EQELEKV+DYAIKCKYN++
Subjt:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII

A0A6J1CS20 calmodulin-like protein 52.8e-2770Show/hide
Query:  MTRKHDKKKPGLE--KEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII
        MT K  KKKP ++  +EE+KAIFR HD NGDG LSIKELSR FGSLGA  PLYRA CG+  AD DGDG IT++ELEKV+DYA+KCKY+II
Subjt:  MTRKHDKKKPGLE--KEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII

A0A6J1CSH1 probable calcium-binding protein CML151.2e-2543.75Show/hide
Query:  QLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADED-----VLQSLQNRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIFR
        ++K SR +IKEI  +HDIDGDG L   E+++A   LG+     KAHYG+AFAD+D       + L   V +    SD+ T         L +E MK IF+
Subjt:  QLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADED-----VLQSLQNRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIFR

Query:  EHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIK
         HD N DG L+++EL++ FG LG+  P  +A  GL  AD + DG I E EL+K+IDYA K
Subjt:  EHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIK

A0A6J1KUW2 calmodulin-like1.9e-1534.73Show/hide
Query:  LSRSQLKLSRD-------EIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPG---LE
        +S + L+L RD       E +E +Q++D + D +L K+E+  A+        H +A    +   E   +        V  ++ K+  K  ++K     L 
Subjt:  LSRSQLKLSRD-------EIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPG---LE

Query:  KEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYA
        + ++K IF EHD +GDG LS+ EL++ F   G+  PLY+A  GL  AD DGDG I+E+ELEK++DYA
Subjt:  KEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYA

SwissProt top hitse value%identityAlignment
P41208 Centrin-26.9e-0728.97Show/hide
Query:  RDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIFREHDFNGDGRL
        + EI+E     D DG GT+  KE+  A+++LG     ++    ++  D++    + N   F+ V + KM+ K         KEE+   F+  D +  G++
Subjt:  RDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIFREHDFNGDGRL

Query:  SIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVI
        S K L RV   LG           +  AD DGDG ++EQE  +++
Subjt:  SIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVI

Q12798 Centrin-13.1e-0727.59Show/hide
Query:  RDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIFREHDFNGDGRL
        + E++E     D+DG GT+  KE+  A+++LG     ++    ++  D +    +     F+ V + KM+ K         KEE+   FR  D +  G++
Subjt:  RDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIFREHDFNGDGRL

Query:  SIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVI
        S K L RV   LG           +  AD DGDG + E+E  +++
Subjt:  SIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVI

Q338P8 Probable calcium-binding protein CML82.4e-0728.97Show/hide
Query:  RDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIFREHDFNGDGRL
        R EIKE     D DG GT+  KE+  A+++LG     ++ H  +A  D+D   ++ +   FV + +DKM  +         +EE+   F+  D + +G++
Subjt:  RDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIFREHDFNGDGRL

Query:  SIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVI
        S  ++ R+    G  F L      +  ADE+GDG +  +E  K++
Subjt:  SIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVI

Q8K4K1 Centrin-42.4e-0731.03Show/hide
Query:  RDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIFREHDFNGDGRL
        + EIKE     DIDG GT+  KE+  A+++LG     ++    +A  D++   ++     F  + S KM+ K        EKEE+   F+  D +  G +
Subjt:  RDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIFREHDFNGDGRL

Query:  SIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVI
        S+  + RV   LG           L  AD DGDG I E+E  K++
Subjt:  SIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVI

Q9LNE7 Calmodulin-like protein 72.4e-0730.2Show/hide
Query:  EIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQ--NRVGFVCVRSDKMTR--KHDKKKPGLEKEEMKAIFREHDFNGDG
        E+K + Q  D +GDGT+  KE+ + L+SL           G+   D+++ Q ++  +  G  CV  D+     K    +   E+E+MK  F   D NGDG
Subjt:  EIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQ--NRVGFVCVRSDKMTR--KHDKKKPGLEKEEMKAIFREHDFNGDG

Query:  RLSIKELSRVFGSLGAFFPLYRATCGLFI--ADEDGDGFITEQELEKVI
         +++ EL  V  SLG         C   I   D DGDG +  +E  +++
Subjt:  RLSIKELSRVFGSLGAFFPLYRATCGLFI--ADEDGDGFITEQELEKVI

Arabidopsis top hitse value%identityAlignment
AT1G05990.1 EF hand calcium-binding protein family1.7e-0830.2Show/hide
Query:  EIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQ--NRVGFVCVRSDKMTR--KHDKKKPGLEKEEMKAIFREHDFNGDG
        E+K + Q  D +GDGT+  KE+ + L+SL           G+   D+++ Q ++  +  G  CV  D+     K    +   E+E+MK  F   D NGDG
Subjt:  EIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQ--NRVGFVCVRSDKMTR--KHDKKKPGLEKEEMKAIFREHDFNGDG

Query:  RLSIKELSRVFGSLGAFFPLYRATCGLFI--ADEDGDGFITEQELEKVI
         +++ EL  V  SLG         C   I   D DGDG +  +E  +++
Subjt:  RLSIKELSRVFGSLGAFFPLYRATCGLFI--ADEDGDGFITEQELEKVI

AT1G18530.1 EF hand calcium-binding protein family3.9e-0527.78Show/hide
Query:  EIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPGL-EKEEMKAIFREHDFNGDGRLS
        ++K+I    D+D DG+L   E+   L+SLG   +  + H  +A  D        N  GFV       T   D  +  L   E++  IF+  D +G+G +S
Subjt:  EIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPGL-EKEEMKAIFREHDFNGDGRLS

Query:  IKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVI
          EL+     +G        T  +  AD +GDG I+  E   ++
Subjt:  IKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVI

AT2G43290.1 Calcium-binding EF-hand family protein3.2e-0728.1Show/hide
Query:  KLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLG--------TWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIF
        ++   E+K + Q  D +GDG + K+E+  +L++LG        T   H+    G    D D  +SL + +         +   H+  +   E+E+MK  F
Subjt:  KLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLG--------TWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIF

Query:  REHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFI--ADEDGDGFITEQE
           D +GDG ++++EL  V  SLG         C   I   D DGDG +  +E
Subjt:  REHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFI--ADEDGDGFITEQE

AT3G59440.1 Calcium-binding EF-hand family protein8.4e-0828.17Show/hide
Query:  EIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQ--NRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIFREHDFNGDGRL
        ++K + Q  D +GDG + K+E+  +L++L           G+   D+D++Q +Q  +  G  CV  ++    +       E+ +M+  F   D +GDG +
Subjt:  EIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQ--NRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIFREHDFNGDGRL

Query:  SIKELSRVFGSLGAFFPLYRATCGLFI--ADEDGDGFITEQE
        +++EL+ V  SLG         C   I   DEDGDG +  +E
Subjt:  SIKELSRVFGSLGAFFPLYRATCGLFI--ADEDGDGFITEQE

AT4G12860.1 EF hand calcium-binding protein family2.1e-0625.5Show/hide
Query:  LSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIFREHDFNGDG
        + R E+  + Q  D +GDG + K E+    +S+G      + +  +A  D +      +   F  +  + +  K        E+E+M+  FR  D NGDG
Subjt:  LSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIFREHDFNGDG

Query:  RLSIKELSRVFGSLGAFFPLYRATCGLFIA--DEDGDGFITEQELEKVI
         ++ +EL  V  S+G         C   I+  D DGDG +  +E ++++
Subjt:  RLSIKELSRVFGSLGAFFPLYRATCGLFIA--DEDGDGFITEQELEKVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGTCAAGATCACAACTGAAGTTGTCAAGGGATGAGATTAAGGAGATCTTACAAGACCATGATATTGATGGAGATGGCACCCTCTGCAAGAAAGAGGTGGTGCA
AGCCCTGCAATCTTTAGGCACTTGGACTGCGCATCAGAAAGCTCACTATGGTGTTGCGTTTGCTGACGAAGATGTTCTTCAATCGCTGCAAAATCGTGTTGGTTTCGTCT
GTGTTCGTAGCGATAAAATGACTCGTAAACATGACAAGAAGAAACCAGGGTTGGAAAAAGAAGAAATGAAAGCAATTTTTAGGGAGCATGATTTCAATGGCGACGGTCGC
TTGAGCATCAAAGAATTATCGAGAGTGTTCGGGTCGCTCGGTGCATTCTTCCCTCTCTACCGTGCAACTTGTGGCTTGTTCATTGCCGATGAGGACGGCGATGGATTTAT
CACTGAGCAAGAACTAGAGAAAGTGATAGATTATGCTATTAAATGTAAGTATAACATAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTGTCAAGATCACAACTGAAGTTGTCAAGGGATGAGATTAAGGAGATCTTACAAGACCATGATATTGATGGAGATGGCACCCTCTGCAAGAAAGAGGTGGTGCA
AGCCCTGCAATCTTTAGGCACTTGGACTGCGCATCAGAAAGCTCACTATGGTGTTGCGTTTGCTGACGAAGATGTTCTTCAATCGCTGCAAAATCGTGTTGGTTTCGTCT
GTGTTCGTAGCGATAAAATGACTCGTAAACATGACAAGAAGAAACCAGGGTTGGAAAAAGAAGAAATGAAAGCAATTTTTAGGGAGCATGATTTCAATGGCGACGGTCGC
TTGAGCATCAAAGAATTATCGAGAGTGTTCGGGTCGCTCGGTGCATTCTTCCCTCTCTACCGTGCAACTTGTGGCTTGTTCATTGCCGATGAGGACGGCGATGGATTTAT
CACTGAGCAAGAACTAGAGAAAGTGATAGATTATGCTATTAAATGTAAGTATAACATAATATAG
Protein sequenceShow/hide protein sequence
MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDVLQSLQNRVGFVCVRSDKMTRKHDKKKPGLEKEEMKAIFREHDFNGDGR
LSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII