; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G014960 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G014960
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEarly dehydration inducible protein
Genome locationchr08:23124178..23125111
RNA-Seq ExpressionLsi08G014960
SyntenyLsi08G014960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060924.1 hypothetical protein E6C27_scaffold501G00570 [Cucumis melo var. makuwa]1.3e-1466.67Show/hide
Query:  MHQSQ--GSEKVN-EGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGK
        MHQSQ   SEK+N E G + TKV            Q EPT+EGTTVVHLTRKQP   +GG GVLGSAAAAVG+ALRSAKDAVFGKGK
Subjt:  MHQSQ--GSEKVN-EGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGK

KAE8652073.1 hypothetical protein Csa_018632 [Cucumis sativus]5.0e-1463.33Show/hide
Query:  MHQSQ--GSEKVN-EGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKDSN
        MHQSQ   S+K+N E G +ETKV          + Q EP +EGTTVVHLTRKQP    GG GVLGSAA AVG+ALRSAKDAVFGKGK +N
Subjt:  MHQSQ--GSEKVN-EGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKDSN

KAG6585682.1 hypothetical protein SDJN03_18415, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2271.26Show/hide
Query:  MHQSQGSEKVNEGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKDSN
        MHQSQGSEK+NE G +ETKV+T+D+RSPPGQ++ EP +E TTVVHLTRKQ    + GRGVLGSAAAAV + LRSAKDA+FGKGK+ N
Subjt:  MHQSQGSEKVNEGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKDSN

PON48858.1 hypothetical protein PanWU01x14_233910 [Parasponia andersonii]3.6e-1251.11Show/hide
Query:  GSEKVNEGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPH----------GGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKD
        G E++NEG  VE+KV+T+D R+PPG+  +EP  EG  VVHLTRK             GG GG GVL  AAAAV + L+SAKDA+   G+D
Subjt:  GSEKVNEGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPH----------GGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKD

PON84690.1 hypothetical protein TorRG33x02_195170 [Trema orientale]3.9e-1452.94Show/hide
Query:  MHQSQGSEKVNEGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKD
        M+ S+G E++NEG  VE+KV+T+D R+PPG+  +EP  EG  VVHLTRK       G GVL  AAAAV + L+SAKDA+   G+D
Subjt:  MHQSQGSEKVNEGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKD

TrEMBL top hitse value%identityAlignment
A0A0A0LR80 Uncharacterized protein1.2e-1360.92Show/hide
Query:  HQSQGSEKVN-EGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKDSN
        H++  S+K+N E G +ETKV          + Q EP +EGTTVVHLTRKQP    GG GVLGSAA AVG+ALRSAKDAVFGKGK +N
Subjt:  HQSQGSEKVN-EGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKDSN

A0A2P5BJ98 Uncharacterized protein1.7e-1251.11Show/hide
Query:  GSEKVNEGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPH----------GGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKD
        G E++NEG  VE+KV+T+D R+PPG+  +EP  EG  VVHLTRK             GG GG GVL  AAAAV + L+SAKDA+   G+D
Subjt:  GSEKVNEGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPH----------GGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKD

A0A2P5EGM5 Uncharacterized protein1.9e-1452.94Show/hide
Query:  MHQSQGSEKVNEGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKD
        M+ S+G E++NEG  VE+KV+T+D R+PPG+  +EP  EG  VVHLTRK       G GVL  AAAAV + L+SAKDA+   G+D
Subjt:  MHQSQGSEKVNEGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKD

A0A5A7V0S3 Uncharacterized protein6.4e-1566.67Show/hide
Query:  MHQSQ--GSEKVN-EGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGK
        MHQSQ   SEK+N E G + TKV            Q EPT+EGTTVVHLTRKQP   +GG GVLGSAAAAVG+ALRSAKDAVFGKGK
Subjt:  MHQSQ--GSEKVN-EGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGK

A0A6A1W5Z9 Uncharacterized protein1.7e-1252.94Show/hide
Query:  MHQSQGSEKVNEGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKD
        M++S+G+E+VNE G +ETKV+T D RSP GQ+ +EP +E  TVVHLTR +     GG  + G+A AA  + +RSAK+A+FG GKD
Subjt:  MHQSQGSEKVNEGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCAATCCCAGGGGTCGGAGAAGGTAAATGAAGGAGGAGTCGTTGAAACGAAGGTTGACACAATCGATCAGCGTTCACCGCCGGGGCAGAACCAGCGGGAGCCCAC
AAGCGAAGGCACCACGGTGGTTCATCTAACCAGAAAACAACCCCATGGCGGCGAAGGCGGTCGTGGAGTTTTGGGGAGTGCAGCCGCTGCTGTGGGTGACGCCCTTCGTT
CGGCCAAGGATGCCGTTTTTGGGAAGGGGAAAGACAGCAACGGCTGA
mRNA sequenceShow/hide mRNA sequence
TTTGAATCTCGTTGGAAGAACCTACACCCATGCACCAATCCCAGGGGTCGGAGAAGGTAAATGAAGGAGGAGTCGTTGAAACGAAGGTTGACACAATCGATCAGCGTTCA
CCGCCGGGGCAGAACCAGCGGGAGCCCACAAGCGAAGGCACCACGGTGGTTCATCTAACCAGAAAACAACCCCATGGCGGCGAAGGCGGTCGTGGAGTTTTGGGGAGTGC
AGCCGCTGCTGTGGGTGACGCCCTTCGTTCGGCCAAGGATGCCGTTTTTGGGAAGGGGAAAGACAGCAACGGCTGAGTGGAAATTGAAGCTGTATAAATTATATGTAATA
TGGAACTTCTTG
Protein sequenceShow/hide protein sequence
MHQSQGSEKVNEGGVVETKVDTIDQRSPPGQNQREPTSEGTTVVHLTRKQPHGGEGGRGVLGSAAAAVGDALRSAKDAVFGKGKDSNG