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Lsi08G015030 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G015030
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMFP1 attachment factor 1
Genome locationchr08:23152512..23152970
RNA-Seq ExpressionLsi08G015030
SyntenyLsi08G015030
Gene Ontology termsGO:0000278 - mitotic cell cycle (biological process)
GO:0048527 - lateral root development (biological process)
GO:0005635 - nuclear envelope (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016363 - nuclear matrix (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR025265 - WPP domain
IPR038214 - WPP domain superfamily
IPR044692 - WPP domain-containing protein 1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598350.1 MFP1 attachment factor 1, partial [Cucurbita argyrosperma subsp. sororia]2.3e-5981.58Show/hide
Query:  MSDQDNSPQTHLQFPDPDIQDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEI
        MSDQD+SP   ++  +P+I+DPIKP  PFATKFSIWPPTQRTRDAV SRLIETLSTPSILSKR+GTIPPE AAT+ARVIEDEAYATA+GSP TVDDGIEI
Subjt:  MSDQDNSPQTHLQFPDPDIQDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEI

Query:  LQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES
        LQ+YSKEISKRMLEAVKGRAIPAA  ENGE+EG  SPVV+PNDE PTSE ES
Subjt:  LQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES

XP_008444590.1 PREDICTED: MFP1 attachment factor 1 [Cucumis melo]9.2e-6486.36Show/hide
Query:  MSDQDNSPQTHLQFPDPDI--QDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGI
        MSDQ+NSPQ+HLQFPD DI  +DPIKPP PFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFG IPP+EAA VAR+IE+EAYA+ANGSPP+VDDG+
Subjt:  MSDQDNSPQTHLQFPDPDI--QDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGI

Query:  EILQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES
        EILQVYSKEISKRMLEAVKGR IPAA AENGE E VRSPVVEPN ETPT ETES
Subjt:  EILQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES

XP_022961994.1 MFP1 attachment factor 1-like [Cucurbita moschata]1.8e-5981.58Show/hide
Query:  MSDQDNSPQTHLQFPDPDIQDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEI
        MSDQD+SP   ++  +P+I+DPIKP  PFATKFSIWPPTQRTRDAV SRLIETLSTPSILSKR+GTIPPE AAT+ARVIEDEAYATA+GSP TVDDGIEI
Subjt:  MSDQDNSPQTHLQFPDPDIQDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEI

Query:  LQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES
        LQ+YSKEISKRMLEAVKGRAIPAA  ENGE+EG  SPVV+PNDE PTSE ES
Subjt:  LQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES

XP_031736767.1 MFP1 attachment factor 1 [Cucumis sativus]9.5e-6185.53Show/hide
Query:  MSDQDNSPQTHLQFPDPDI--QDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGI
        MSDQ+NSPQ+HLQFPD DI  +DPIKPP  FATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPP+EAATVA++IE+EAYA ANGSPP+VDDGI
Subjt:  MSDQDNSPQTHLQFPDPDI--QDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGI

Query:  EILQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSET
        EILQVYSKEISKRMLEAVKGR  PAA AENGE E VRSPVVE N ETPT ET
Subjt:  EILQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSET

XP_038885619.1 MFP1 attachment factor 1-like [Benincasa hispida]2.8e-6891.45Show/hide
Query:  MSDQDNSPQTHLQFPDPDIQDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEI
        MSDQDNSPQTHLQFPD +I+DP KPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGT+PPEEAA VARVIEDEAYATANGSPPTVDDGIEI
Subjt:  MSDQDNSPQTHLQFPDPDIQDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEI

Query:  LQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES
        LQVYSKEISKRMLEAVKGRAIPAA AENGE EGVRSPV+EP DET T E+ES
Subjt:  LQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES

TrEMBL top hitse value%identityAlignment
A0A0A0LNB9 MFP1 attachment factor 14.6e-6185.53Show/hide
Query:  MSDQDNSPQTHLQFPDPDI--QDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGI
        MSDQ+NSPQ+HLQFPD DI  +DPIKPP  FATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPP+EAATVA++IE+EAYA ANGSPP+VDDGI
Subjt:  MSDQDNSPQTHLQFPDPDI--QDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGI

Query:  EILQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSET
        EILQVYSKEISKRMLEAVKGR  PAA AENGE E VRSPVVE N ETPT ET
Subjt:  EILQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSET

A0A1S3BBH7 MFP1 attachment factor 14.4e-6486.36Show/hide
Query:  MSDQDNSPQTHLQFPDPDI--QDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGI
        MSDQ+NSPQ+HLQFPD DI  +DPIKPP PFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFG IPP+EAA VAR+IE+EAYA+ANGSPP+VDDG+
Subjt:  MSDQDNSPQTHLQFPDPDI--QDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGI

Query:  EILQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES
        EILQVYSKEISKRMLEAVKGR IPAA AENGE E VRSPVVEPN ETPT ETES
Subjt:  EILQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES

A0A5A7V571 MFP1 attachment factor 14.4e-6486.36Show/hide
Query:  MSDQDNSPQTHLQFPDPDI--QDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGI
        MSDQ+NSPQ+HLQFPD DI  +DPIKPP PFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFG IPP+EAA VAR+IE+EAYA+ANGSPP+VDDG+
Subjt:  MSDQDNSPQTHLQFPDPDI--QDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGI

Query:  EILQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES
        EILQVYSKEISKRMLEAVKGR IPAA AENGE E VRSPVVEPN ETPT ETES
Subjt:  EILQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES

A0A6J1HFL2 MFP1 attachment factor 1-like8.7e-6081.58Show/hide
Query:  MSDQDNSPQTHLQFPDPDIQDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEI
        MSDQD+SP   ++  +P+I+DPIKP  PFATKFSIWPPTQRTRDAV SRLIETLSTPSILSKR+GTIPPE AAT+ARVIEDEAYATA+GSP TVDDGIEI
Subjt:  MSDQDNSPQTHLQFPDPDIQDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEI

Query:  LQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES
        LQ+YSKEISKRMLEAVKGRAIPAA  ENGE+EG  SPVV+PNDE PTSE ES
Subjt:  LQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES

A0A6J1KE17 MFP1 attachment factor 1-like3.1e-5779.61Show/hide
Query:  MSDQDNSPQTHLQFPDPDIQDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEI
        MSDQD+SP   ++  +P+I+DPIK   PFATKFSIWPPTQRTRDAV SRLIETLST SILSKR+GTIPPE AAT+ARVIEDEAYATA+GSP TVDDGIEI
Subjt:  MSDQDNSPQTHLQFPDPDIQDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEI

Query:  LQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES
        LQVYSK+ISKRMLEAVKGRAIPAA  ENGE+EG  SPVV+PNDE P SE ES
Subjt:  LQVYSKEISKRMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES

SwissProt top hitse value%identityAlignment
Q0WQ91 WPP domain-containing protein 34.8e-1543.22Show/hide
Query:  SDQDNSPQTHLQFPDPDIQDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEIL
        SD+ +  Q H      ++    K  K     FS+WPP Q++RD V++ +I+TLST SILS ++GTI PEEA+ VA+ IE++AY  A  S     DGI+ L
Subjt:  SDQDNSPQTHLQFPDPDIQDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEIL

Query:  QVYSKEISKRMLEAVKGR
        +VY  E S+RM+E+ + R
Subjt:  QVYSKEISKRMLEAVKGR

Q9C500 WPP domain-containing protein 24.2e-2755.12Show/hide
Query:  KPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRAIPAASA
        KP      IWPPTQ+TRDAV++RLIETLST SILSKR+GT+  ++A TVA++IE+EAY  A+ +  + DDGI+IL++YSKEISKRMLE+VK R+   AS 
Subjt:  KPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRAIPAASA

Query:  ENGEREGVRSPV--VEPNDETPTSETE
         NG  E   +    V  +D  P SE E
Subjt:  ENGEREGVRSPV--VEPNDETPTSETE

Q9FMH6 WPP domain-containing protein 13.2e-2760Show/hide
Query:  KPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRAIPA
        K P P      IWPPTQ+TRDAVI+RLIETLST SILSKRFG++  EEA++VA+ IEDEAYA A+ +    DDGIEIL+ YSKEISKRMLE+VK ++   
Subjt:  KPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRAIPA

Query:  ASAENGEREGVRSPV
        AS    + +G+ S V
Subjt:  ASAENGEREGVRSPV

Q9LE82 RAN GTPase-activating protein 13.6e-1041.18Show/hide
Query:  IWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANG--SPPTVDDGIEILQVYSKEISKRMLEAVK
        +WPP++ TR  ++ R+ + ++TPSI S+++G +  EEA   A+ IED A+ATAN         DG   + VY+KE SK ML+ +K
Subjt:  IWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANG--SPPTVDDGIEILQVYSKEISKRMLEAVK

Q9M7N6 MFP1 attachment factor 13.0e-3369.31Show/hide
Query:  KPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRAIPAASA
        KP  T FSIWPPTQRTRDAVI+RLIE+LSTPSILSKR+GT+P +EA+  AR+IE+EA+A A  +    DDGIEILQVYSKEISKRM++ VK R+ PAA++
Subjt:  KPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRAIPAASA

Query:  E
        E
Subjt:  E

Arabidopsis top hitse value%identityAlignment
AT1G47200.1 WPP domain protein 23.0e-2855.12Show/hide
Query:  KPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRAIPAASA
        KP      IWPPTQ+TRDAV++RLIETLST SILSKR+GT+  ++A TVA++IE+EAY  A+ +  + DDGI+IL++YSKEISKRMLE+VK R+   AS 
Subjt:  KPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRAIPAASA

Query:  ENGEREGVRSPV--VEPNDETPTSETE
         NG  E   +    V  +D  P SE E
Subjt:  ENGEREGVRSPV--VEPNDETPTSETE

AT3G63130.1 RAN GTPase activating protein 12.5e-1141.18Show/hide
Query:  IWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANG--SPPTVDDGIEILQVYSKEISKRMLEAVK
        +WPP++ TR  ++ R+ + ++TPSI S+++G +  EEA   A+ IED A+ATAN         DG   + VY+KE SK ML+ +K
Subjt:  IWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANG--SPPTVDDGIEILQVYSKEISKRMLEAVK

AT3G63130.2 RAN GTPase activating protein 12.5e-1141.18Show/hide
Query:  IWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANG--SPPTVDDGIEILQVYSKEISKRMLEAVK
        +WPP++ TR  ++ R+ + ++TPSI S+++G +  EEA   A+ IED A+ATAN         DG   + VY+KE SK ML+ +K
Subjt:  IWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANG--SPPTVDDGIEILQVYSKEISKRMLEAVK

AT5G27940.1 WPP domain protein 33.4e-1643.22Show/hide
Query:  SDQDNSPQTHLQFPDPDIQDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEIL
        SD+ +  Q H      ++    K  K     FS+WPP Q++RD V++ +I+TLST SILS ++GTI PEEA+ VA+ IE++AY  A  S     DGI+ L
Subjt:  SDQDNSPQTHLQFPDPDIQDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEIL

Query:  QVYSKEISKRMLEAVKGR
        +VY  E S+RM+E+ + R
Subjt:  QVYSKEISKRMLEAVKGR

AT5G43070.1 WPP domain protein 12.3e-2860Show/hide
Query:  KPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRAIPA
        K P P      IWPPTQ+TRDAVI+RLIETLST SILSKRFG++  EEA++VA+ IEDEAYA A+ +    DDGIEIL+ YSKEISKRMLE+VK ++   
Subjt:  KPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRAIPA

Query:  ASAENGEREGVRSPV
        AS    + +G+ S V
Subjt:  ASAENGEREGVRSPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGATCAAGACAACTCCCCTCAGACCCATCTACAATTCCCAGACCCCGATATCCAAGACCCCATCAAACCGCCGAAGCCATTCGCCACCAAATTCAGCATATGGCC
ACCAACGCAGCGCACTCGCGACGCCGTTATAAGCCGTCTGATCGAAACCCTCTCCACCCCTTCCATTCTCTCTAAGCGTTTCGGCACCATTCCGCCGGAAGAAGCCGCCA
CCGTCGCGCGAGTCATCGAGGACGAAGCGTATGCCACCGCCAATGGCTCTCCACCCACCGTGGACGACGGCATTGAGATTCTGCAGGTCTACTCCAAGGAGATTAGTAAG
CGGATGCTCGAGGCGGTCAAGGGTAGAGCGATTCCGGCGGCTTCAGCGGAAAATGGTGAGAGGGAGGGAGTAAGATCACCAGTTGTTGAACCTAATGACGAAACCCCAAC
TTCGGAAACTGAATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGATCAAGACAACTCCCCTCAGACCCATCTACAATTCCCAGACCCCGATATCCAAGACCCCATCAAACCGCCGAAGCCATTCGCCACCAAATTCAGCATATGGCC
ACCAACGCAGCGCACTCGCGACGCCGTTATAAGCCGTCTGATCGAAACCCTCTCCACCCCTTCCATTCTCTCTAAGCGTTTCGGCACCATTCCGCCGGAAGAAGCCGCCA
CCGTCGCGCGAGTCATCGAGGACGAAGCGTATGCCACCGCCAATGGCTCTCCACCCACCGTGGACGACGGCATTGAGATTCTGCAGGTCTACTCCAAGGAGATTAGTAAG
CGGATGCTCGAGGCGGTCAAGGGTAGAGCGATTCCGGCGGCTTCAGCGGAAAATGGTGAGAGGGAGGGAGTAAGATCACCAGTTGTTGAACCTAATGACGAAACCCCAAC
TTCGGAAACTGAATCTTGA
Protein sequenceShow/hide protein sequence
MSDQDNSPQTHLQFPDPDIQDPIKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPEEAATVARVIEDEAYATANGSPPTVDDGIEILQVYSKEISK
RMLEAVKGRAIPAASAENGEREGVRSPVVEPNDETPTSETES