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Lsi08G015040 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G015040
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:23158360..23158635
RNA-Seq ExpressionLsi08G015040
SyntenyLsi08G015040
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060932.1 hypothetical protein E6C27_scaffold501G00650 [Cucumis melo var. makuwa]8.6e-1761.62Show/hide
Query:  MRFF-KSPPAGGGVKPRGVII-ILIAVAFVALLLLSTAETNNMNGEDNNINIVKLNKEA-----NPSHKLHHRTMR-PFHVLQSSKRKVPNASDPLHNR
        MRF  KSP AG GVKPRG+II IL AV F+ LLLL ++ +  +    +N+N+VKL KE      + S KLHHR MR PF+VLQSSKRKVPNASDPLHNR
Subjt:  MRFF-KSPPAGGGVKPRGVII-ILIAVAFVALLLLSTAETNNMNGEDNNINIVKLNKEA-----NPSHKLHHRTMR-PFHVLQSSKRKVPNASDPLHNR
KGN62473.1 hypothetical protein Csa_018580 [Cucumis sativus]8.9e-1459.18Show/hide
Query:  MRFF-KSPPAGGGVKPRGVII-ILIAVAFVALLLLSTAETNNMNGEDNNINIVKLNKE---ANP-SHKLHHRTM-RPFHVLQSSKRKVPNASDPLHNR
        MRF  KSP AG GV PRG++I +L  V F+ LLLL ++         +N+N VKL KE   A P S KLHHR M RP +VLQSSKRKVPNASDPLHNR
Subjt:  MRFF-KSPPAGGGVKPRGVII-ILIAVAFVALLLLSTAETNNMNGEDNNINIVKLNKE---ANP-SHKLHHRTM-RPFHVLQSSKRKVPNASDPLHNR
TrEMBL top hitse value%identityAlignment
A0A0A0LL43 Uncharacterized protein4.3e-1459.18Show/hide
Query:  MRFF-KSPPAGGGVKPRGVII-ILIAVAFVALLLLSTAETNNMNGEDNNINIVKLNKE---ANP-SHKLHHRTM-RPFHVLQSSKRKVPNASDPLHNR
        MRF  KSP AG GV PRG++I +L  V F+ LLLL ++         +N+N VKL KE   A P S KLHHR M RP +VLQSSKRKVPNASDPLHNR
Subjt:  MRFF-KSPPAGGGVKPRGVII-ILIAVAFVALLLLSTAETNNMNGEDNNINIVKLNKE---ANP-SHKLHHRTM-RPFHVLQSSKRKVPNASDPLHNR
A0A5A7UYF8 Uncharacterized protein4.2e-1761.62Show/hide
Query:  MRFF-KSPPAGGGVKPRGVII-ILIAVAFVALLLLSTAETNNMNGEDNNINIVKLNKEA-----NPSHKLHHRTMR-PFHVLQSSKRKVPNASDPLHNR
        MRF  KSP AG GVKPRG+II IL AV F+ LLLL ++ +  +    +N+N+VKL KE      + S KLHHR MR PF+VLQSSKRKVPNASDPLHNR
Subjt:  MRFF-KSPPAGGGVKPRGVII-ILIAVAFVALLLLSTAETNNMNGEDNNINIVKLNKEA-----NPSHKLHHRTMR-PFHVLQSSKRKVPNASDPLHNR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTCTTCAAATCTCCTCCTGCAGGCGGCGGCGTGAAGCCGCGTGGTGTAATAATAATATTAATAGCGGTGGCTTTTGTGGCGTTGCTGCTACTTTCAACAGCTGA
GACGAATAACATGAATGGAGAAGACAATAATATTAATATTGTCAAGTTAAACAAAGAAGCAAACCCATCTCACAAACTCCACCACCGTACGATGAGGCCATTCCATGTTT
TACAGTCAAGTAAGAGGAAGGTTCCAAATGCTTCAGACCCACTCCACAATCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGGTTCTTCAAATCTCCTCCTGCAGGCGGCGGCGTGAAGCCGCGTGGTGTAATAATAATATTAATAGCGGTGGCTTTTGTGGCGTTGCTGCTACTTTCAACAGCTGA
GACGAATAACATGAATGGAGAAGACAATAATATTAATATTGTCAAGTTAAACAAAGAAGCAAACCCATCTCACAAACTCCACCACCGTACGATGAGGCCATTCCATGTTT
TACAGTCAAGTAAGAGGAAGGTTCCAAATGCTTCAGACCCACTCCACAATCGTTAA
Protein sequenceShow/hide protein sequence
MRFFKSPPAGGGVKPRGVIIILIAVAFVALLLLSTAETNNMNGEDNNINIVKLNKEANPSHKLHHRTMRPFHVLQSSKRKVPNASDPLHNR