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Lsi08G015100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G015100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGibberellin regulated protein
Genome locationchr08:23193981..23195157
RNA-Seq ExpressionLsi08G015100
SyntenyLsi08G015100
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142881.1 peamaclein [Cucumis sativus]7.6e-3687.95Show/hide
Query:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        FLHLLT LL+LTSF+ELSLGA GFCG KC RRC+KAGV+DRCMKYCGICCEKCGCVPSGTYGNKHECPCYGN+KNSKG SKCP
Subjt:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

XP_008444582.1 PREDICTED: peamaclein-like [Cucumis melo]4.9e-3586.75Show/hide
Query:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        FLHLLT LL+LTSF+ELSLGA GFCG KC RRC+KAGV+DRCMKYCGICC KCGCVPSGTYGNKHECPCYGN+KNSKG SKCP
Subjt:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

XP_022997556.1 peamaclein-like [Cucurbita maxima]2.2e-3585.54Show/hide
Query:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        FLHLL+++LVLTSF++LSL A GFC SKCG RCAKAGVQ+RC+KYCGICCEKCGCVPSGTYGNKHECPCYG MKNSKGKSKCP
Subjt:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

XP_023546651.1 peamaclein [Cucurbita pepo subsp. pepo]2.9e-3585.54Show/hide
Query:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        FLHLL+++LVLTSF++LSL A GFC SKC  RCAKAGVQDRC+KYCGICCEKCGCVPSGTYGNKHECPCYG MKNSKGKSKCP
Subjt:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

XP_038885998.1 peamaclein-like [Benincasa hispida]4.1e-3486.75Show/hide
Query:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        FLHLLT LLVLTSF+ELS  A G C SKC +RCAKAGVQDRCMKYCGICC KCGCVPSGTYGNKHECPCYGNMKNSKGK KCP
Subjt:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LKN7 Uncharacterized protein3.7e-3687.95Show/hide
Query:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        FLHLLT LL+LTSF+ELSLGA GFCG KC RRC+KAGV+DRCMKYCGICCEKCGCVPSGTYGNKHECPCYGN+KNSKG SKCP
Subjt:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

A0A1S3BAP8 peamaclein-like2.4e-3586.75Show/hide
Query:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        FLHLLT LL+LTSF+ELSLGA GFCG KC RRC+KAGV+DRCMKYCGICC KCGCVPSGTYGNKHECPCYGN+KNSKG SKCP
Subjt:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

A0A6J1BV69 peamaclein-like2.1e-2874.42Show/hide
Query:  FLHLLTLLLVLTSFMELSLGALG---FCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        FLHLLT LL+L+ F++LS+ A G   FC  KC  RCAKAGVQDRC+KYCGICCEKC CVPSGTYGNKHECPCY  MKNSK K KCP
Subjt:  FLHLLTLLLVLTSFMELSLGALG---FCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

A0A6J1HDT0 peamaclein-like7.6e-3483.13Show/hide
Query:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        FLHLL+ +LVLTSF++LSL A G C SKC  RCAKAGVQDRC+KYCGICCEKCGCVPSGTYGNKHECPCYG +KNSKGKSKCP
Subjt:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

A0A6J1K7T2 peamaclein-like1.1e-3585.54Show/hide
Query:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        FLHLL+++LVLTSF++LSL A GFC SKCG RCAKAGVQ+RC+KYCGICCEKCGCVPSGTYGNKHECPCYG MKNSKGKSKCP
Subjt:  FLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

SwissProt top hitse value%identityAlignment
C0HLQ1 Cypmaclein1.4e-2169.49Show/hide
Query:  CGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        C  +C RRC+KA   DRC+KYCGICCEKC CVP GTYGN+  CPCY N+KNSKG  KCP
Subjt:  CGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

O80641 Gibberellin-regulated protein 86.5e-2261.33Show/hide
Query:  LVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        L+LTS   +   A   CG KC  RC+KAG  + C+KYC ICC+KC CVPSGT+G+K ECPCY +MKNSKG SKCP
Subjt:  LVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

P86888 Peamaclein1.8e-2478.33Show/hide
Query:  FCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        FC SKCG RC+KAG Q+RC+KYCGICCEKC CVPSGTYGNK ECPCY ++KNSKG  KCP
Subjt:  FCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

Q8LFM2 Gibberellin-regulated protein 102.6e-2365.43Show/hide
Query:  LLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCG-CVPSGTYGNKHECPCYGNMKNSKGKSKCP
        L+  LL+ +S   LS      CG KC  RC+KAG QDRC+KYC ICCEKC  CVPSGTYGNK ECPCY +MKNSKG SKCP
Subjt:  LLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCG-CVPSGTYGNKHECPCYGNMKNSKGKSKCP

Q948Z4 Snakin-11.1e-2666.28Show/hide
Query:  LHLLTLLLV----LTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        L LLTLLLV      S ++ ++    FC SKC  RC+KAG+ DRC+KYCGICCE+C CVPSGTYGNKHECPCY + KNSKGKSKCP
Subjt:  LHLLTLLLV----LTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

Arabidopsis top hitse value%identityAlignment
AT1G10588.1 Gibberellin-regulated family protein7.3e-2159.74Show/hide
Query:  LLVLTSFMELSLGALGFCGSKCGRRCAKAG-VQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        LL+ +SF  LS      CG KC  RC+KA    + C++ C ICC+KC CVPSGTYGNK ECPCY +MKNSKG SKCP
Subjt:  LLVLTSFMELSLGALGFCGSKCGRRCAKAG-VQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

AT1G10588.2 Gibberellin-regulated family protein2.8e-2061.04Show/hide
Query:  LLVLTSFMELSLGALGFCGSKCGRRCAKAG-VQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        LL+ +SF  LS  A   CG KC  RC+KA    + C++ C ICC+KC CVPSGTYGNK ECPCY +MKNSKG SKCP
Subjt:  LLVLTSFMELSLGALGFCGSKCGRRCAKAG-VQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

AT2G14900.1 Gibberellin-regulated family protein3.3e-2166.67Show/hide
Query:  FCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        +CG KC  RC +AG++DRC+KYCGICC+ C CVPSGTYGNKHEC CY +  +SKG  KCP
Subjt:  FCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

AT2G39540.1 Gibberellin-regulated family protein4.6e-2361.33Show/hide
Query:  LVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP
        L+LTS   +   A   CG KC  RC+KAG  + C+KYC ICC+KC CVPSGT+G+K ECPCY +MKNSKG SKCP
Subjt:  LVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP

AT5G59845.1 Gibberellin-regulated family protein1.9e-2465.43Show/hide
Query:  LLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCG-CVPSGTYGNKHECPCYGNMKNSKGKSKCP
        L+  LL+ +S   LS      CG KC  RC+KAG QDRC+KYC ICCEKC  CVPSGTYGNK ECPCY +MKNSKG SKCP
Subjt:  LLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCEKCG-CVPSGTYGNKHECPCYGNMKNSKGKSKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACATGCAATGGCGTTCACCTTAGAAGTGGCAAGTGAAGGTGACGGTGCAATGAAAGGACGCCACGTAGACGTCCGCACTAACCAAAACTGCAAGGATGAAGAGGT
GTCAAAGCATGATTGGTCAGTCTCCATAGCAATTATTTCCAAGCAGAAGTCGAAAACTCTAGCGAACTTCCTTCATCTTCTTACTTTGCTTCTCGTTCTCACTTCCTTCA
TGGAGCTCTCGTTAGGTGCCCTAGGTTTTTGCGGGTCGAAATGTGGAAGGAGATGTGCAAAAGCTGGGGTGCAGGATCGGTGCATGAAGTACTGTGGGATATGCTGCGAG
AAATGCGGGTGTGTGCCGTCTGGGACTTATGGGAATAAACATGAATGCCCTTGTTATGGGAACATGAAGAACTCCAAGGGCAAGTCCAAGTGTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACATGCAATGGCGTTCACCTTAGAAGTGGCAAGTGAAGGTGACGGTGCAATGAAAGGACGCCACGTAGACGTCCGCACTAACCAAAACTGCAAGGATGAAGAGGT
GTCAAAGCATGATTGGTCAGTCTCCATAGCAATTATTTCCAAGCAGAAGTCGAAAACTCTAGCGAACTTCCTTCATCTTCTTACTTTGCTTCTCGTTCTCACTTCCTTCA
TGGAGCTCTCGTTAGGTGCCCTAGGTTTTTGCGGGTCGAAATGTGGAAGGAGATGTGCAAAAGCTGGGGTGCAGGATCGGTGCATGAAGTACTGTGGGATATGCTGCGAG
AAATGCGGGTGTGTGCCGTCTGGGACTTATGGGAATAAACATGAATGCCCTTGTTATGGGAACATGAAGAACTCCAAGGGCAAGTCCAAGTGTCCTTAATTAATTTAAAC
CCCCCGCCCCCCCCCCTTTAATTTCTTGCCTTGTCCCTAAGCTCTGTGTTCTATATGGACCGGCCTTCTGAGTTCAATTACCCTATATATATATATATATATTATTGAAG
CTAAGTTTTAAATTAGACATATCTATCCCATTTCTCTCTCATTTATTTTCTTCTCTTAAGTTTAAGAAAATAAAATGGAGAAAAAAGAAAAGAAAAGAATGAAATCTGAG
TGCTGGGTGGGAGGTCCTTTTAGTGAAGATTGAGTTGTTTTGTTTAGGAGGATCGTGTTCACGTGCGGTGTACGATGTGACAACGACACTTCTACTATTTTTTCTGTTTC
CAATTAATTTCTCAAACTTTAATGCTATTTCCACCAAAAGTTTATACCAAA
Protein sequenceShow/hide protein sequence
MKHAMAFTLEVASEGDGAMKGRHVDVRTNQNCKDEEVSKHDWSVSIAIISKQKSKTLANFLHLLTLLLVLTSFMELSLGALGFCGSKCGRRCAKAGVQDRCMKYCGICCE
KCGCVPSGTYGNKHECPCYGNMKNSKGKSKCP