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Lsi08G015310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G015310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSmall VCP/p97-interacting protein
Genome locationchr08:23352416..23353739
RNA-Seq ExpressionLsi08G015310
SyntenyLsi08G015310
Gene Ontology termsNA
InterPro domainsIPR031632 - Small VCP/p97-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020610.1 hypothetical protein SDJN02_17296 [Cucurbita argyrosperma subsp. argyrosperma]7.6e-3088.04Show/hide
Query:  IVKIPIGRSWEKPATASKAMGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        +VKIPI     KPATASKAMGQCVSCLDE +KQQRKEEERLASVEAR+KAAEAAQRRQEEFEKSAAGRAARAQ+AANAKQSAN NKGEPVLK
Subjt:  IVKIPIGRSWEKPATASKAMGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
KAG7029301.1 hypothetical protein SDJN02_07639, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-2493.15Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQC SCLDEG++Q+RKEEERLASVEARAKAAEAAQ+RQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
XP_008444542.1 PREDICTED: uncharacterized protein LOC103487833 [Cucumis melo]6.6e-2698.63Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQCVSCLDEG+KQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
XP_022962383.1 uncharacterized protein LOC111462843 [Cucurbita moschata]2.8e-2493.15Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQC SCLDEG++Q+RKEEERLASVEARAKAAEAAQ+RQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
XP_038886006.1 uncharacterized protein LOC120076314 [Benincasa hispida]3.0e-26100Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
TrEMBL top hitse value%identityAlignment
A0A1S3BAJ0 uncharacterized protein LOC1034878333.2e-2698.63Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQCVSCLDEG+KQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
A0A6J1GGM5 uncharacterized protein LOC1114540283.0e-2493.15Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQCVSCLDE +KQQRKEEERLASVEAR+KAAEAAQRRQEEFEKSAAGRAARAQ+AANAKQSAN NKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
A0A6J1HEN1 uncharacterized protein LOC1114628431.4e-2493.15Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQC SCLDEG++Q+RKEEERLASVEARAKAAEAAQ+RQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
A0A6J1K846 uncharacterized protein LOC1114920131.4e-2493.15Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQC SCLDEG++Q+RKEEERLASVEARAKAAEAAQ+RQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
A0A6J1KLT2 uncharacterized protein LOC1114964243.0e-2493.15Show/hide
Query:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQCVSCLDE +KQQRKEEERLASVEAR+KAAEAAQRRQEEFEKSAAGRAARAQ+AANAKQSAN NKGEPVLK
Subjt:  MGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63905.1 unknown protein4.4e-2078.57Show/hide
Query:  CVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        C SC D  +K+QRKEEER AS EARAKAAEAAQRR+E+F+KSAAGRAA+AQL   AKQSANTNKGEPVLK
Subjt:  CVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATGGCGGTGTCAGATAACGTTGGGTGTTGTACACTCAATCCTAACCGTCCAATATAATTTTCGAATTACAAGAAAGTCAAAATTGATAGTGAAAATACCAATTGG
GAGATCTTGGGAAAAACCTGCAACTGCAAGCAAAGCGATGGGGCAATGCGTAAGTTGTCTTGACGAAGGCGAAAAGCAACAGAGAAAAGAGGAAGAAAGATTAGCTTCCG
TCGAAGCTCGCGCCAAAGCTGCTGAAGCCGCTCAGAGAAGGCAAGAAGAATTTGAAAAATCTGCTGCAGGAAGGGCTGCACGTGCTCAGTTGGCAGCAAATGCAAAGCAA
TCTGCTAACACTAACAAGGGAGAACCAGTTCTGAAGGTCATTGAAATACCAGTTGTTTTTCTTGTTTCTTAA
mRNA sequenceShow/hide mRNA sequence
TTGAAAACTTATATATTTATACATTCTTATAAAAAGTTTTCAAATTTGCTATATTTAAAAAAGAAAAAAATCCAAAATTAAACCATCTTGGATTAACCAAGATGAGATAA
GGACAATTCTGTAAACGGAAAAGCGGGTAATGAGATGGCGGTGTCAGATAACGTTGGGTGTTGTACACTCAATCCTAACCGTCCAATATAATTTTCGAATTACAAGAAAG
TCAAAATTGATAGTGAAAATACCAATTGGGAGATCTTGGGAAAAACCTGCAACTGCAAGCAAAGCGATGGGGCAATGCGTAAGTTGTCTTGACGAAGGCGAAAAGCAACA
GAGAAAAGAGGAAGAAAGATTAGCTTCCGTCGAAGCTCGCGCCAAAGCTGCTGAAGCCGCTCAGAGAAGGCAAGAAGAATTTGAAAAATCTGCTGCAGGAAGGGCTGCAC
GTGCTCAGTTGGCAGCAAATGCAAAGCAATCTGCTAACACTAACAAGGGAGAACCAGTTCTGAAGGTCATTGAAATACCAGTTGTTTTTCTTGTTTCTTAA
Protein sequenceShow/hide protein sequence
MRWRCQITLGVVHSILTVQYNFRITRKSKLIVKIPIGRSWEKPATASKAMGQCVSCLDEGEKQQRKEEERLASVEARAKAAEAAQRRQEEFEKSAAGRAARAQLAANAKQ
SANTNKGEPVLKVIEIPVVFLVS