CuGenDBv2

Gene ID	Lsi08G015370
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	protein SOB FIVE-LIKE 6-like
Genome location	chr08:23388300..23390413
RNA-Seq Expression	Lsi08G015370
Synteny	Lsi08G015370
Gene Ontology terms	GO:0009691 - cytokinin biosynthetic process (biological process) GO:0009736 - cytokinin-activated signaling pathway (biological process)
InterPro domains	IPR044670 - SOB-five-Like (SOFL) family

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022962515.1 uncharacterized protein LOC111462920 [Cucurbita moschata]

5.0e-59

85.03

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Query:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGK---EEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRNQ
        MS+FSGSHCNN+  ESGWTMY E+S ETEGRFR  AVDYGGRGK   EEEEGDLSMISDASSGPR+GY EE NCQSV RN GK+AA KSKRKEEMGRRN+
Subjt:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGK---EEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRNQ

Query:  NSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGK
        +SCLDDTASSPVFGLSK RETNPYRNEGLVENVKEFSQTHSRKQHGK
Subjt:  NSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGK

XP_022997597.1 uncharacterized protein LOC111492483 [Cucurbita maxima]

1.6e-60

85.81

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Query:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGK----EEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRN
        MS+FSGSHCNN+  ESGWTMY E+S ETEGRFR SAVDYGGRGK    EEEEGDLSMISDASSGPR+GY EE NCQSVRRNGGK+AA KSKRKE+MGRRN
Subjt:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGK----EEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRN

Query:  QNSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGK
        ++SCLDDTASSPVFGLSK RETNPYRNEGLVENVKEFSQTHSRKQHGK
Subjt:  QNSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGK

XP_023546846.1 uncharacterized protein LOC111805836 [Cucurbita pepo subsp. pepo]

9.2e-61

86.81

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Query:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRNQNSC
        MS+FSGSHCNN+  ESGWTMY E+S +TEGRFR SAVDYGGRGKEEEEGDLSMISDASSGPR+GY EE NCQSV RN GK+AA KSKRKEEMGRRN++SC
Subjt:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRNQNSC

Query:  LDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGK
        LDDTASSPVFGLSK RETNPYRNEGLVENVKEFSQTHSRKQHGK
Subjt:  LDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGK

XP_038886133.1 uncharacterized protein LOC120076391 isoform X1 [Benincasa hispida]

5.7e-63

89.66

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Query:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRNQNSC
        MSNFSGSHCNNSG ESGWTMYFE+SIETEG FR S VDYGG GKEEEEGDLSMISDASSGP NGYYEENN Q VRRNGGKSAAGKSKRKEEMGRRNQ+SC
Subjt:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRNQNSC

Query:  LDDTASSPVFGLSKIRETNPYRNEGLVENVKEFS-QTHSRKQHGK
        LDDTASSPVFGLS +RE +PYRNEGLVENVKEFS QTHSRKQHGK
Subjt:  LDDTASSPVFGLSKIRETNPYRNEGLVENVKEFS-QTHSRKQHGK

XP_038886134.1 uncharacterized protein LOC120076391 isoform X2 [Benincasa hispida]

5.7e-63

89.66

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Query:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRNQNSC
        MSNFSGSHCNNSG ESGWTMYFE+SIETEG FR S VDYGG GKEEEEGDLSMISDASSGP NGYYEENN Q VRRNGGKSAAGKSKRKEEMGRRNQ+SC
Subjt:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRNQNSC

Query:  LDDTASSPVFGLSKIRETNPYRNEGLVENVKEFS-QTHSRKQHGK
        LDDTASSPVFGLS +RE +PYRNEGLVENVKEFS QTHSRKQHGK
Subjt:  LDDTASSPVFGLSKIRETNPYRNEGLVENVKEFS-QTHSRKQHGK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LR31 Uncharacterized protein

1.2e-58

85.52

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Query:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGK-EEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRNQNS
        MSNF+GSHC+NSG ESGWTMYFE+SIETE RFRGS VDYGG  K EEEE DLSMISDASSGPRNGYYEE NCQSV R+GGK  AGKSKR+EEMG RNQ+S
Subjt:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGK-EEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRNQNS

Query:  CLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGK
        CLDDTASSPVFGLSKIRETNPYRNEGL +NVKEFSQTHSRK HGK
Subjt:  CLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGK

A0A1S3BBA3 uncharacterized protein LOC103487825

4.8e-55

82.07

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Query:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRNQNSC
        MSNF+GSH +NSG ESGWTMYFE+SIE E RFRGS VDYGG  KEEEEGDLSMISDASSGPRNGYYEE +C SV R+GGK  AGKSKR+EEMG RNQ+SC
Subjt:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRNQNSC

Query:  LDDTASSPVFGLSKIRET-NPYRNEGLVENVKEFSQTHSRKQHGK
        LDDTASSPV GLSKIRET NPYRNEGL +N KEFSQTHSRK HGK
Subjt:  LDDTASSPVFGLSKIRET-NPYRNEGLVENVKEFSQTHSRKQHGK

A0A6J1BR82 uncharacterized protein LOC111005036 isoform X2

1.5e-40

69.54

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Query:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGKEEEEGDLSMISDASSGPRNGY------YEENNCQSV-RRNGGKSAAGKSKRKEEMG
        MSNFSG+HC NSG +SGWT+YF+DS E   RFR S  DYGG    EEEGDLSM+SDASSGPRNG+      +EE N Q V RRNGGKSAA K+KR++E+G
Subjt:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGKEEEEGDLSMISDASSGPRNGY------YEENNCQSV-RRNGGKSAAGKSKRKEEMG

Query:  RRNQNSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGK
        RRNQ+S LDDTA+SPVF LSK RETNPY NE LVENVKEF+ +HSRKQ GK
Subjt:  RRNQNSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGK

A0A6J1HFC4 uncharacterized protein LOC111462920

2.4e-59

85.03

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Query:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGK---EEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRNQ
        MS+FSGSHCNN+  ESGWTMY E+S ETEGRFR  AVDYGGRGK   EEEEGDLSMISDASSGPR+GY EE NCQSV RN GK+AA KSKRKEEMGRRN+
Subjt:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGK---EEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRNQ

Query:  NSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGK
        +SCLDDTASSPVFGLSK RETNPYRNEGLVENVKEFSQTHSRKQHGK
Subjt:  NSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGK

A0A6J1K5J3 uncharacterized protein LOC111492483

7.6e-61

85.81

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Query:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGK----EEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRN
        MS+FSGSHCNN+  ESGWTMY E+S ETEGRFR SAVDYGGRGK    EEEEGDLSMISDASSGPR+GY EE NCQSVRRNGGK+AA KSKRKE+MGRRN
Subjt:  MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGK----EEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRN

Query:  QNSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGK
        ++SCLDDTASSPVFGLSK RETNPYRNEGLVENVKEFSQTHSRKQHGK
Subjt:  QNSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGK

SwissProt top hits

e value

%identity

Alignment

Q8L9K4 Protein SOB FIVE-LIKE 5

2.2e-09

36.31

Show/hide

Query:  NNSGDESGWTMYFEDSIETEGR--FRGS-------------AVDYGGRGKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGR
        ++SG ESGWT+Y + S+ +     FR S               +Y  + +EEEE DLSMISDASSGPRN   EE++ + +   G K    + K++ +   
Subjt:  NNSGDESGWTMYFEDSIETEGR--FRGS-------------AVDYGGRGKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGR

Query:  RNQNSCLDDTASSPVF----------GLSKIRETNPYRNEGLVENVKEFSQTHSRKQ
           NS LDDTASSP+F          G +KI +T P       E+  ++SQ  S  Q
Subjt:  RNQNSCLDDTASSPVF----------GLSKIRETNPYRNEGLVENVKEFSQTHSRKQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G58460.1 unknown protein

3.8e-04

32.48

Show/hide

Query:  NFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDY-GGRGKEEEEGDLSMISDASSGP--------RNGYYEENN---CQSVRRNGGKSAAGKSKRKE
        +FS    +++GD SGWTMY   S            DY  G  K+E + D SM+SDASSGP           + ++N    C+S  +N  K+   K K  E
Subjt:  NFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDY-GGRGKEEEEGDLSMISDASSGP--------RNGYYEENN---CQSVRRNGGKSAAGKSKRKE

Query:  EMGRRNQ-NSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVK
        E G   + NS  DDTASS   G  ++     ++N+   +   +F Q++S ++  K K
Subjt:  EMGRRNQ-NSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVK

AT4G33800.1 unknown protein

1.6e-10

36.31

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Query:  NNSGDESGWTMYFEDSIETEGR--FRGS-------------AVDYGGRGKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGR
        ++SG ESGWT+Y + S+ +     FR S               +Y  + +EEEE DLSMISDASSGPRN   EE++ + +   G K    + K++ +   
Subjt:  NNSGDESGWTMYFEDSIETEGR--FRGS-------------AVDYGGRGKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGR

Query:  RNQNSCLDDTASSPVF----------GLSKIRETNPYRNEGLVENVKEFSQTHSRKQ
           NS LDDTASSP+F          G +KI +T P       E+  ++SQ  S  Q
Subjt:  RNQNSCLDDTASSPVF----------GLSKIRETNPYRNEGLVENVKEFSQTHSRKQ

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGTAATTTTTCGGGTTCGCATTGTAATAATAGTGGTGATGAATCGGGGTGGACAATGTATTTTGAGGATTCGATTGAGACGGAGGGGAGATTTCGGGGGAGTGCGGT
GGATTACGGCGGCAGAGGGAAGGAGGAGGAAGAAGGGGATTTGTCGATGATTTCGGATGCGTCGTCGGGGCCGAGGAATGGGTATTATGAGGAGAATAATTGTCAGTCAG
TGCGGCGGAATGGGGGGAAATCGGCGGCGGGGAAAAGTAAGAGGAAAGAGGAGATGGGGCGGCGGAACCAAAATTCTTGCCTTGATGACACTGCAAGCTCCCCTGTTTTT
GGGCTTTCCAAGATCAGAGAGACAAATCCATACAGAAATGAAGGTTTGGTGGAAAATGTAAAAGAATTCTCCCAAACCCATTCTCGAAAACAACATGGGAAGGTAAAACC
GTAA

mRNA sequence

Show/hide mRNA sequence

GTTTGACAAGACAAAACAGAGGACGAGTATTCACCAAAATAATTTTGGGAAGGGACAATATTTATTAATACTTTGGGGCCGCCTTCAAATTAACTATCCAGGTGGCTCGC
TTCTCCCAATCATTGATCCCCAAATACCATACTCTATAAAACTAACCAAACCCACCCTCTAATTTTTCCACTTAAACATTTAACAAACAATCCTCCAACCAGCCCACTTT
CAGCCACTCCCCAATCCATCCATCTCCCTTCTTCTTCTTCTTCTCCAATGCTCAATTGATTCTGCCTCTGTTTCTCCAATTCTGTTACTCTGTTTTGGGATTTTTTTAAA
GGATGAGTAATTTTTCGGGTTCGCATTGTAATAATAGTGGTGATGAATCGGGGTGGACAATGTATTTTGAGGATTCGATTGAGACGGAGGGGAGATTTCGGGGGAGTGCG
GTGGATTACGGCGGCAGAGGGAAGGAGGAGGAAGAAGGGGATTTGTCGATGATTTCGGATGCGTCGTCGGGGCCGAGGAATGGGTATTATGAGGAGAATAATTGTCAGTC
AGTGCGGCGGAATGGGGGGAAATCGGCGGCGGGGAAAAGTAAGAGGAAAGAGGAGATGGGGCGGCGGAACCAAAATTCTTGCCTTGATGACACTGCAAGCTCCCCTGTTT
TTGGGCTTTCCAAGATCAGAGAGACAAATCCATACAGAAATGAAGGTTTGGTGGAAAATGTAAAAGAATTCTCCCAAACCCATTCTCGAAAACAACATGGGAAGGTAAAA
CCGTAA

Protein sequence

Show/hide protein sequence

MSNFSGSHCNNSGDESGWTMYFEDSIETEGRFRGSAVDYGGRGKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRNGGKSAAGKSKRKEEMGRRNQNSCLDDTASSPVF
GLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVKP

Lsi08G015370 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome