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Lsi08G015480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G015480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAP2-like ethylene-responsive transcription factor ANT
Genome locationchr08:23543233..23545281
RNA-Seq ExpressionLsi08G015480
SyntenyLsi08G015480
Gene Ontology termsGO:0050794 - regulation of cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFP84083.1 ap2-like ethylene-responsive transcription factor ant [Phtheirospermum japonicum]1.4e-0973.91Show/hide
Query:  DKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQDIDG
        D   +R +  +  TRHRWTGRYEAHLWDNSCKKEGQTRKGRQDI G
Subjt:  DKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQDIDG

KAE9457283.1 hypothetical protein C3L33_10819, partial [Rhododendron williamsianum]1.0e-0955.41Show/hide
Query:  GRQDIDGLGDMKLICGIIVARKKDKP---EKEDKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
        G  +  GL   K  CG IVA  + +P   +  D   +R +  +  TRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
Subjt:  GRQDIDGLGDMKLICGIIVARKKDKP---EKEDKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ

KAF2560461.1 hypothetical protein F2Q70_00015990 [Brassica cretica]1.5e-1953.51Show/hide
Query:  MSKHRWTGRYEAHLWDNSCKKEGQTRKGRQDIDGLGDMKLICGI--IVARKKDKP--------EKEDKLQERRTNQKRK------TRHRWTGRYEAHLWD
        ++KHRWTGRYEAHLWDNSCKKEGQ+R+GRQ   G  D +       + A K   P           +K  E   N  R+       RHRWTGRYEAHLWD
Subjt:  MSKHRWTGRYEAHLWDNSCKKEGQTRKGRQDIDGLGDMKLICGI--IVARKKDKP--------EKEDKLQERRTNQKRK------TRHRWTGRYEAHLWD

Query:  NSCKKEGQTRKGRQ
        NSCKKEGQ+R+GRQ
Subjt:  NSCKKEGQTRKGRQ

KAF3517197.1 hypothetical protein DY000_02059209 [Brassica cretica]6.1e-1844.12Show/hide
Query:  MSKHRWTGRYEAHLWDNSCKKEGQTRKGRQDIDGLGDMKLICGIIVARKKDKPE----------KEDK-------------------------LQERRTN
        +++HRWTGRYEAHLWDNSC++EGQ+RKGRQD   L  + +I   ++    D  E          KE+K                          ++    
Subjt:  MSKHRWTGRYEAHLWDNSCKKEGQTRKGRQDIDGLGDMKLICGIIVARKKDKPE----------KEDK-------------------------LQERRTN

Query:  QKRKTR--HRWTGRYEAHLWDNSCKKEGQTRKGRQD
         K  TR  HRWTGRYEAHLWDNSC++EGQ+RKGRQD
Subjt:  QKRKTR--HRWTGRYEAHLWDNSCKKEGQTRKGRQD

KAG5543690.1 hypothetical protein RHGRI_016448 [Rhododendron griersonianum]1.0e-0955.41Show/hide
Query:  GRQDIDGLGDMKLICGIIVARKKDKP---EKEDKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
        G  +  GL   K  CG IVA  + +P   +  D   +R +  +  TRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
Subjt:  GRQDIDGLGDMKLICGIIVARKKDKP---EKEDKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ

TrEMBL top hitse value%identityAlignment
A0A151SE72 AP2-like ethylene-responsive transcription factor ANT3.3e-0954.43Show/hide
Query:  LICGIIVARKKDKPEKEDKLQ----------ERRTNQKR-KTRHRWTGRYEAHLWDNSCKKEGQTRKGRQDIDGLGDMK
        +I  +++  KK  PEK D+ Q           +RT+Q R  TRHRWTGRYEAHLWDNSCKKEGQ+RKGRQ   G  DM+
Subjt:  LICGIIVARKKDKPEKEDKLQ----------ERRTNQKR-KTRHRWTGRYEAHLWDNSCKKEGQTRKGRQDIDGLGDMK

A0A1S4BKR5 AP2-like ethylene-responsive transcription factor ANT3.3e-0943.96Show/hide
Query:  NSCKKEGQTRKGRQDIDGLGDMKLICGIIVARKKDKPEKEDKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQDIDGLGDMK
        +SC  + Q      +   +   K   G +V ++    +  D   +R +  +  TRHRWTGRYEAHLWDNSCKKEGQTRKGRQ   G  DM+
Subjt:  NSCKKEGQTRKGRQDIDGLGDMKLICGIIVARKKDKPEKEDKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQDIDGLGDMK

A0A444WTZ9 Uncharacterized protein1.5e-0966.67Show/hide
Query:  DKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQDIDGLGDMK
        D   +R +  +  TRHRWTGRYEAHLWDNSCKKEGQ+RKGRQD+ G  DM+
Subjt:  DKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQDIDGLGDMK

A0A6A4LD92 Uncharacterized protein (Fragment)5.1e-1055.41Show/hide
Query:  GRQDIDGLGDMKLICGIIVARKKDKP---EKEDKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
        G  +  GL   K  CG IVA  + +P   +  D   +R +  +  TRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
Subjt:  GRQDIDGLGDMKLICGIIVARKKDKP---EKEDKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ

A0A6N2BH02 Uncharacterized protein3.3e-0950.6Show/hide
Query:  DNSCKKEGQTRKGRQDIDGLGDMKLICGIIVARKKDKPEKEDKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
        DNSC  E      +Q+I    +   I G IV  KK      D   +R +  +  TRHRWTGRYEAHLWDNSC++EGQTRKGRQ
Subjt:  DNSCKKEGQTRKGRQDIDGLGDMKLICGIIVARKKDKPEKEDKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ

SwissProt top hitse value%identityAlignment
Q1PFE1 AP2-like ethylene-responsive transcription factor AIL12.2e-1068.63Show/hide
Query:  KKDKPEKEDKLQERRTNQKR-KTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
        K+  P K      +RT+Q R  TRHRWTGRYEAHLWDNSCKKEGQTR+GRQ
Subjt:  KKDKPEKEDKLQERRTNQKR-KTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ

Q6PQQ4 AP2-like ethylene-responsive transcription factor BBM1.1e-0976.32Show/hide
Query:  ERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
        +R +  +  TRHRWTGRYEAHLWDNSCK+EGQTRKGRQ
Subjt:  ERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ

Q84Z02 AP2-like ethylene-responsive transcription factor CRL51.3e-1073.81Show/hide
Query:  DKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
        D   +R +  +  TRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
Subjt:  DKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ

Q8L3U3 AP2-like ethylene-responsive transcription factor BBM11.1e-0976.32Show/hide
Query:  ERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
        +R +  +  TRHRWTGRYEAHLWDNSCK+EGQTRKGRQ
Subjt:  ERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ

Q8LSN2 AP2-like ethylene-responsive transcription factor BBM21.1e-0976.32Show/hide
Query:  ERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
        +R +  +  TRHRWTGRYEAHLWDNSCK+EGQTRKGRQ
Subjt:  ERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ

Arabidopsis top hitse value%identityAlignment
AT1G72570.1 Integrase-type DNA-binding superfamily protein1.6e-1168.63Show/hide
Query:  KKDKPEKEDKLQERRTNQKR-KTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
        K+  P K      +RT+Q R  TRHRWTGRYEAHLWDNSCKKEGQTR+GRQ
Subjt:  KKDKPEKEDKLQERRTNQKR-KTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ

AT3G20840.1 Integrase-type DNA-binding superfamily protein2.9e-1066.67Show/hide
Query:  DKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
        D   +R +  +  TRHRWTGRYEAHLWDNSC++EGQ+RKGRQ
Subjt:  DKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ

AT5G10510.1 AINTEGUMENTA-like 63.8e-1066.67Show/hide
Query:  DKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
        D   +R +  +  TRHRWTGRYEAHLWDNSC++EGQ RKGRQ
Subjt:  DKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ

AT5G10510.3 AINTEGUMENTA-like 61.2e-1152.7Show/hide
Query:  DKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQDI-DGLGDMKLICGIIVARKKDKP--EKEDKS
        D   +R +  +  TRHRWTGRYEAHLWDNSC++EGQ RKGRQ      G   LI G I+A  K     +KEDK+
Subjt:  DKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQDI-DGLGDMKLICGIIVARKKDKP--EKEDKS

AT5G17430.1 Integrase-type DNA-binding superfamily protein7.7e-1176.32Show/hide
Query:  ERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ
        +R +  +  TRHRWTGRYEAHLWDNSCK+EGQTRKGRQ
Subjt:  ERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAACATAGATGGACTGGGAGATATGAAGCTCATCTGTGGGATAATAGTTGCAAGAAAGAAGGACAAACCAGAAAAGGAAGACAAGACATAGATGGACTGGGAGA
TATGAAGCTCATCTGTGGGATAATAGTTGCAAGAAAGAAGGACAAACCAGAAAAGGAAGACAAGTTGCAAGAAAGAAGGACAAACCAGAAAAGGAAGACAAGACATAGAT
GGACTGGGAGATATGAAGCTCATCTGTGGGATAATAGTTGCAAGAAAGAAGGACAAACCAGAAAAGGAAGACAAGACATAGATGGACTGGGAGATATGAAGCTCATCTGT
GGGATAATAGTTGCAAGAAAGAAGGACAAACCAGAAAAGGAAGACAAGAGTTTTCCGGGGCCTCTTTTTTTAGTTTCCACGGCGGTTCCGTCGCCTCCAGTAGGGGAGAT
CTGGCCGGAAGCCGTGAACGAGCTCGATTGTGAACCTGGGCTCATCGACAAACTCAACGACTGCAATTCCCCGCAGCTCATTCCGCCAATGGAAGCAGAGCCACCACCAC
CACTACCGTCATTCACAAGAGCGCCGCCACCACCGCCGGCGGTAATATGCTGCTCCAGAGTATTATGTGTGGCGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAACATAGATGGACTGGGAGATATGAAGCTCATCTGTGGGATAATAGTTGCAAGAAAGAAGGACAAACCAGAAAAGGAAGACAAGACATAGATGGACTGGGAGA
TATGAAGCTCATCTGTGGGATAATAGTTGCAAGAAAGAAGGACAAACCAGAAAAGGAAGACAAGTTGCAAGAAAGAAGGACAAACCAGAAAAGGAAGACAAGACATAGAT
GGACTGGGAGATATGAAGCTCATCTGTGGGATAATAGTTGCAAGAAAGAAGGACAAACCAGAAAAGGAAGACAAGACATAGATGGACTGGGAGATATGAAGCTCATCTGT
GGGATAATAGTTGCAAGAAAGAAGGACAAACCAGAAAAGGAAGACAAGAGTTTTCCGGGGCCTCTTTTTTTAGTTTCCACGGCGGTTCCGTCGCCTCCAGTAGGGGAGAT
CTGGCCGGAAGCCGTGAACGAGCTCGATTGTGAACCTGGGCTCATCGACAAACTCAACGACTGCAATTCCCCGCAGCTCATTCCGCCAATGGAAGCAGAGCCACCACCAC
CACTACCGTCATTCACAAGAGCGCCGCCACCACCGCCGGCGGTAATATGCTGCTCCAGAGTATTATGTGTGGCGGAGTAG
Protein sequenceShow/hide protein sequence
MSKHRWTGRYEAHLWDNSCKKEGQTRKGRQDIDGLGDMKLICGIIVARKKDKPEKEDKLQERRTNQKRKTRHRWTGRYEAHLWDNSCKKEGQTRKGRQDIDGLGDMKLIC
GIIVARKKDKPEKEDKSFPGPLFLVSTAVPSPPVGEIWPEAVNELDCEPGLIDKLNDCNSPQLIPPMEAEPPPPLPSFTRAPPPPPAVICCSRVLCVAE