; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G015640 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G015640
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionpiRNA biogenesis protein EXD1 isoform X1
Genome locationchr08:23700796..23708348
RNA-Seq ExpressionLsi08G015640
SyntenyLsi08G015640
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR002562 - 3'-5' exonuclease domain
IPR004087 - K Homology domain
IPR004088 - K Homology domain, type 1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142915.1 piRNA biogenesis protein EXD1 [Cucumis sativus]2.3e-15682.65Show/hide
Query:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC
        MANTPPSHQTCIPLPSDSGENQTDPEA+ATLVPIHIVTHVSQLP EFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGG+ELVKVC
Subjt:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC

Query:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ------------------------------------------------DPKFWTYRPLSELM
        KPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ                                                DPKFWTYRP+SELM
Subjt:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ------------------------------------------------DPKFWTYRPLSELM

Query:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKES
        VRAAADDVRFLLYIYHKMMEKLNH+SLWYLAVRGALYCRCFCISDN YADWPPLPSVPD+LV EGNAPEEEILSVLDVPHGMMGRVIGR+GASILSIKES
Subjt:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKES

Query:  CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI
        CNAEILIGGAKGPPDKV IIGSVRQVRKAEAMLRGRMLEI
Subjt:  CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI

XP_008444500.1 PREDICTED: piRNA biogenesis protein EXD1 isoform X1 [Cucumis melo]6.7e-15682.65Show/hide
Query:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC
        MANTPPSHQTCIPLPSDSGENQTDPEA+ATLVPIHIVTHVSQLP EFVEPS EKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGG+ELVKVC
Subjt:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC

Query:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ------------------------------------------------DPKFWTYRPLSELM
        KPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ                                                DPKFWTYRP+SELM
Subjt:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ------------------------------------------------DPKFWTYRPLSELM

Query:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKES
        VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDN YADWPPLPSVPD+LV EGNAPEEEILSVLDVPHGMMGRVIGR+GASILSIKES
Subjt:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKES

Query:  CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI
        CNAEILIGGAKGPPDKV IIGSVRQVRKAEAMLRGRMLEI
Subjt:  CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI

XP_008444501.1 PREDICTED: exosome component 10 isoform X2 [Cucumis melo]3.8e-15990.06Show/hide
Query:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC
        MANTPPSHQTCIPLPSDSGENQTDPEA+ATLVPIHIVTHVSQLP EFVEPS EKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGG+ELVKVC
Subjt:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC

Query:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ--------------------DPKFWTYRPLSELMVRAAADDVRFLLYIYHKMMEKLNHQSLW
        KPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ                    DPKFWTYRP+SELMVRAAADDVRFLLYIYHKMMEKLNHQSLW
Subjt:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ--------------------DPKFWTYRPLSELMVRAAADDVRFLLYIYHKMMEKLNHQSLW

Query:  YLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKVFIIGSVRQVRK
        YLAVRGALYCRCFCISDN YADWPPLPSVPD+LV EGNAPEEEILSVLDVPHGMMGRVIGR+GASILSIKESCNAEILIGGAKGPPDKV IIGSVRQVRK
Subjt:  YLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKVFIIGSVRQVRK

Query:  AEAMLRGRMLEI
        AEAMLRGRMLEI
Subjt:  AEAMLRGRMLEI

XP_023001953.1 piRNA biogenesis protein EXD1-like [Cucurbita maxima]2.9e-15180.59Show/hide
Query:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC
        MANTPP HQT IPLPSDSGENQTDPEA+ATLVPIHIVTH SQLP EFV+PSP K LVVGFDCEGVDLCRHGNLC+MQIAFPDAVYLVDAVQGG+ELVKVC
Subjt:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC

Query:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT------------------------------------------------QDPKFWTYRPLSELM
        KPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDT                                                QDP FWTYRPLSELM
Subjt:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT------------------------------------------------QDPKFWTYRPLSELM

Query:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKES
        VRAAADDVRFLLYIYHKMMEKLN QSLWYLAVRGALYCRCFCISDNEY DWPPLPSVPD+LVVEGNAPEEEILSVLDVP GMMGRVIGR+G+SILSIKES
Subjt:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKES

Query:  CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI
        CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI
Subjt:  CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI

XP_038886611.1 piRNA biogenesis protein EXD1 isoform X1 [Benincasa hispida]1.7e-15984.12Show/hide
Query:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC
        MANTPPSHQTCIPLPSDSGENQTDPE +ATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGG+ELVKVC
Subjt:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC

Query:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ------------------------------------------------DPKFWTYRPLSELM
        KPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ                                                DPKFWTYRPLSELM
Subjt:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ------------------------------------------------DPKFWTYRPLSELM

Query:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKES
        VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPD+LVVEGNAP+EEILSVLDVPHGMMGRVIGRKGASILSIKES
Subjt:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKES

Query:  CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI
        CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI
Subjt:  CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI

TrEMBL top hitse value%identityAlignment
A0A0A0LN42 Uncharacterized protein1.1e-15682.65Show/hide
Query:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC
        MANTPPSHQTCIPLPSDSGENQTDPEA+ATLVPIHIVTHVSQLP EFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGG+ELVKVC
Subjt:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC

Query:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ------------------------------------------------DPKFWTYRPLSELM
        KPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ                                                DPKFWTYRP+SELM
Subjt:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ------------------------------------------------DPKFWTYRPLSELM

Query:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKES
        VRAAADDVRFLLYIYHKMMEKLNH+SLWYLAVRGALYCRCFCISDN YADWPPLPSVPD+LV EGNAPEEEILSVLDVPHGMMGRVIGR+GASILSIKES
Subjt:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKES

Query:  CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI
        CNAEILIGGAKGPPDKV IIGSVRQVRKAEAMLRGRMLEI
Subjt:  CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI

A0A1S3B9Z5 piRNA biogenesis protein EXD1 isoform X13.3e-15682.65Show/hide
Query:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC
        MANTPPSHQTCIPLPSDSGENQTDPEA+ATLVPIHIVTHVSQLP EFVEPS EKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGG+ELVKVC
Subjt:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC

Query:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ------------------------------------------------DPKFWTYRPLSELM
        KPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ                                                DPKFWTYRP+SELM
Subjt:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ------------------------------------------------DPKFWTYRPLSELM

Query:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKES
        VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDN YADWPPLPSVPD+LV EGNAPEEEILSVLDVPHGMMGRVIGR+GASILSIKES
Subjt:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKES

Query:  CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI
        CNAEILIGGAKGPPDKV IIGSVRQVRKAEAMLRGRMLEI
Subjt:  CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI

A0A1S3BAF6 exosome component 10 isoform X21.8e-15990.06Show/hide
Query:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC
        MANTPPSHQTCIPLPSDSGENQTDPEA+ATLVPIHIVTHVSQLP EFVEPS EKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGG+ELVKVC
Subjt:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC

Query:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ--------------------DPKFWTYRPLSELMVRAAADDVRFLLYIYHKMMEKLNHQSLW
        KPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ                    DPKFWTYRP+SELMVRAAADDVRFLLYIYHKMMEKLNHQSLW
Subjt:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ--------------------DPKFWTYRPLSELMVRAAADDVRFLLYIYHKMMEKLNHQSLW

Query:  YLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKVFIIGSVRQVRK
        YLAVRGALYCRCFCISDN YADWPPLPSVPD+LV EGNAPEEEILSVLDVPHGMMGRVIGR+GASILSIKESCNAEILIGGAKGPPDKV IIGSVRQVRK
Subjt:  YLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKVFIIGSVRQVRK

Query:  AEAMLRGRMLEI
        AEAMLRGRMLEI
Subjt:  AEAMLRGRMLEI

A0A5A7UYD1 PiRNA biogenesis protein EXD1 isoform X13.3e-15682.65Show/hide
Query:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC
        MANTPPSHQTCIPLPSDSGENQTDPEA+ATLVPIHIVTHVSQLP EFVEPS EKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGG+ELVKVC
Subjt:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC

Query:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ------------------------------------------------DPKFWTYRPLSELM
        KPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ                                                DPKFWTYRP+SELM
Subjt:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ------------------------------------------------DPKFWTYRPLSELM

Query:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKES
        VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDN YADWPPLPSVPD+LV EGNAPEEEILSVLDVPHGMMGRVIGR+GASILSIKES
Subjt:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKES

Query:  CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI
        CNAEILIGGAKGPPDKV IIGSVRQVRKAEAMLRGRMLEI
Subjt:  CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI

A0A6J1KS25 piRNA biogenesis protein EXD1-like1.4e-15180.59Show/hide
Query:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC
        MANTPP HQT IPLPSDSGENQTDPEA+ATLVPIHIVTH SQLP EFV+PSP K LVVGFDCEGVDLCRHGNLC+MQIAFPDAVYLVDAVQGG+ELVKVC
Subjt:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC

Query:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT------------------------------------------------QDPKFWTYRPLSELM
        KPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDT                                                QDP FWTYRPLSELM
Subjt:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT------------------------------------------------QDPKFWTYRPLSELM

Query:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKES
        VRAAADDVRFLLYIYHKMMEKLN QSLWYLAVRGALYCRCFCISDNEY DWPPLPSVPD+LVVEGNAPEEEILSVLDVP GMMGRVIGR+G+SILSIKES
Subjt:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKES

Query:  CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI
        CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI
Subjt:  CNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI

SwissProt top hitse value%identityAlignment
P56960 Exosome component 102.7e-0626.63Show/hide
Query:  PIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRH------GNLCVMQIAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQ
        P H+V+ +    +E VE + +   ++G     VDL  H      G  C+MQI+     ++VD ++   ++  +   +L    + KV H    D E L   
Subjt:  PIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRH------GNLCVMQIAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQ

Query:  FGIKLNNVIDTQDP-----------------------------KFWTYRPLSELMVRAAADDVRFLLYIYHKM----MEKLNHQ
        FG+ + N+ DT                                  W  RPL E M+  A DD  +LLYIY +M     E+ NHQ
Subjt:  FGIKLNNVIDTQDP-----------------------------KFWTYRPLSELMVRAAADDVRFLLYIYHKM----MEKLNHQ

Q01780 Exosome component 105.1e-0525.64Show/hide
Query:  PSDSGENQTDPEASATL--VPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCE--GVDLCRH------GNLCVMQIAFPDAVYLVDAVQGGDELVKVCKPAL
        P+D+   +  P+    +   P H ++ +    +E VE + EK L    +C+   VDL  H      G  C+MQI+     +++D ++   ++  +   +L
Subjt:  PSDSGENQTDPEASATL--VPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCE--GVDLCRH------GNLCVMQIAFPDAVYLVDAVQGGDELVKVCKPAL

Query:  ESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQDP-----------------------------KFWTYRPLSELMVRAAADDVRFLLYIYHKM
            + KV H    D E L   FG+ + N+ DT                                  W  RPL E M+  A DD  +LLYIY KM
Subjt:  ESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQDP-----------------------------KFWTYRPLSELMVRAAADDVRFLLYIYHKM

Q6NRD5 piRNA biogenesis protein EXD12.6e-0940.96Show/hide
Query:  VVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVK-VCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ
        V+     G ++CRHG L  +Q A    VYL D +  G ++ K   +  LE   + KVIHDC+   + L  Q+GI LNNV DTQ
Subjt:  VVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVK-VCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ

Q8CDF7 piRNA biogenesis protein EXD11.6e-1142.53Show/hide
Query:  EKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDA-VQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ
        +K  V+    EG ++CRHG LC +Q+A    VYL D  + G        +  LE   + KVIHDC+  S+ L  Q+GI LNNV DTQ
Subjt:  EKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDA-VQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ

Q8NHP7 piRNA biogenesis protein EXD16.2e-1142.53Show/hide
Query:  EKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDA-VQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ
        +K  V+    EG ++CRHG LC +Q+A    VYL D  + G        +  LE   + KVIHDC+  S+ L  Q+GI LNNV DTQ
Subjt:  EKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDA-VQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ

Arabidopsis top hitse value%identityAlignment
AT1G54440.1 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain3.6e-0627.61Show/hide
Query:  GNLCVMQIAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT-----------------------------QDPK
        G  C+MQI+     Y+VD  +  D +    +   +     KVIH   RD   L   FGI + N+ DT                                 
Subjt:  GNLCVMQIAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT-----------------------------QDPK

Query:  FWTYRPLSELMVRAAADDVRFLLYIYHKMMEKLN
         W  RPL ++M R A +D  +LLYIY  M  +L+
Subjt:  FWTYRPLSELMVRAAADDVRFLLYIYHKMMEKLN

AT1G54440.2 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain3.6e-0627.61Show/hide
Query:  GNLCVMQIAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT-----------------------------QDPK
        G  C+MQI+     Y+VD  +  D +    +   +     KVIH   RD   L   FGI + N+ DT                                 
Subjt:  GNLCVMQIAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT-----------------------------QDPK

Query:  FWTYRPLSELMVRAAADDVRFLLYIYHKMMEKLN
         W  RPL ++M R A +D  +LLYIY  M  +L+
Subjt:  FWTYRPLSELMVRAAADDVRFLLYIYHKMMEKLN

AT2G25910.1 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein2.9e-11760Show/hide
Query:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC
        MA++ P+    +P+P + G      EA+   VPI+IVT   QLP +F+ PSPEK LV+GFDCEGVDLCRHG LC+MQIAF +A+YLVD ++GG+ ++K C
Subjt:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC

Query:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT------------------------------------------------QDPKFWTYRPLSELM
        KPALES Y+TKVIHDCKRDSEALYFQFGI+L+NV+DT                                                QDPKFWTYRP++ELM
Subjt:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT------------------------------------------------QDPKFWTYRPLSELM

Query:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCF-CISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKE
        +RAAADDVRFLLY+YHKMM KLN +SLW+LAVRGALYCRC  C++D ++ADWP +P +PD+L  E    EEEILSVLDVP G MGRVIGRKGASIL+IKE
Subjt:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCF-CISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKE

Query:  SCNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLE
        +CNAEILIGGAKGPPDK+F+IG VR+VRKAEA+LRGRM++
Subjt:  SCNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLE

AT2G25910.2 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein7.3e-11659.82Show/hide
Query:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC
        MA++ P+    +P+P + G      EA+   VPI+IVT   QLP +F+ PSPEK LV+GFDCEGVDLCRHG LC+MQIAF +A+YLVD ++GG+ ++K C
Subjt:  MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVC

Query:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT------------------------------------------------QDPKFWTYRPLSELM
        KPALES Y+TKVIHDCKRDSEALYFQFGI+L+NV+DT                                                QDPKFWTYRP++ELM
Subjt:  KPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT------------------------------------------------QDPKFWTYRPLSELM

Query:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCF-CISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKE
        +RAAADDVRFLLY+YHKMM KLN +SLW+LAVRGALYCRC  C++D ++ADWP +P +PD+L  E    EEEILSVLDVP G MGRVIGRKGASIL+IKE
Subjt:  VRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCF-CISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKE

Query:  SCN-AEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLE
        +CN AEILIGGAKGPPDK+F+IG VR+VRKAEA+LRGRM++
Subjt:  SCN-AEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACACTCCTCCTTCTCACCAGACGTGTATTCCTCTGCCTTCGGACTCAGGTGAAAATCAGACCGATCCTGAAGCCAGCGCAACCTTGGTTCCTATACATATTGT
TACTCATGTATCTCAACTGCCTAACGAATTTGTTGAACCATCACCTGAAAAGCCTCTGGTAGTTGGCTTTGATTGTGAAGGTGTTGATCTGTGTCGCCATGGAAACCTCT
GTGTCATGCAGATTGCATTTCCAGATGCTGTATATCTGGTTGATGCTGTACAGGGAGGAGACGAACTTGTGAAAGTCTGTAAGCCTGCCCTTGAGTCCACATATGTCACA
AAAGTTATTCATGATTGCAAACGAGATAGCGAGGCATTGTACTTTCAGTTTGGTATCAAGTTGAACAACGTTATTGATACACAGGACCCCAAGTTTTGGACCTACAGACC
ATTGTCTGAATTGATGGTCCGTGCAGCTGCTGATGATGTACGCTTTCTTCTTTACATCTATCACAAGATGATGGAGAAATTGAATCACCAATCGCTGTGGTACCTTGCAG
TGCGTGGTGCTTTGTACTGTCGGTGTTTTTGCATCAGTGATAATGAATATGCTGACTGGCCTCCTCTCCCTTCTGTTCCAGATGACCTTGTAGTAGAGGGCAATGCTCCT
GAAGAAGAAATTCTTTCAGTCTTAGATGTTCCCCATGGAATGATGGGTCGCGTAATTGGTAGGAAGGGAGCCTCAATTTTGTCAATAAAGGAATCTTGCAATGCGGAAAT
TCTCATTGGCGGTGCTAAGGGCCCACCAGACAAGGTATTCATCATTGGATCGGTGAGGCAGGTGAGGAAGGCAGAAGCTATGCTAAGAGGAAGGATGCTTGAAATATGA
mRNA sequenceShow/hide mRNA sequence
TTCCAAGTAATTAAAAGCAATAAGTTCCGAGAGAAAATCGAATGATTCGCTCAAATGGCGAACACTCCTCCTTCTCACCAGACGTGTATTCCTCTGCCTTCGGACTCAGG
TGAAAATCAGACCGATCCTGAAGCCAGCGCAACCTTGGTTCCTATACATATTGTTACTCATGTATCTCAACTGCCTAACGAATTTGTTGAACCATCACCTGAAAAGCCTC
TGGTAGTTGGCTTTGATTGTGAAGGTGTTGATCTGTGTCGCCATGGAAACCTCTGTGTCATGCAGATTGCATTTCCAGATGCTGTATATCTGGTTGATGCTGTACAGGGA
GGAGACGAACTTGTGAAAGTCTGTAAGCCTGCCCTTGAGTCCACATATGTCACAAAAGTTATTCATGATTGCAAACGAGATAGCGAGGCATTGTACTTTCAGTTTGGTAT
CAAGTTGAACAACGTTATTGATACACAGGACCCCAAGTTTTGGACCTACAGACCATTGTCTGAATTGATGGTCCGTGCAGCTGCTGATGATGTACGCTTTCTTCTTTACA
TCTATCACAAGATGATGGAGAAATTGAATCACCAATCGCTGTGGTACCTTGCAGTGCGTGGTGCTTTGTACTGTCGGTGTTTTTGCATCAGTGATAATGAATATGCTGAC
TGGCCTCCTCTCCCTTCTGTTCCAGATGACCTTGTAGTAGAGGGCAATGCTCCTGAAGAAGAAATTCTTTCAGTCTTAGATGTTCCCCATGGAATGATGGGTCGCGTAAT
TGGTAGGAAGGGAGCCTCAATTTTGTCAATAAAGGAATCTTGCAATGCGGAAATTCTCATTGGCGGTGCTAAGGGCCCACCAGACAAGGTATTCATCATTGGATCGGTGA
GGCAGGTGAGGAAGGCAGAAGCTATGCTAAGAGGAAGGATGCTTGAAATATGATTGAAAGAAAGAAAAGAAAATGAAAACTGTATTGTTGTGATGAAAATGAACTCAAAA
TCCTCAAATATTGAAACACTTTCGTGTTTGTGTATTTGCACGAATGGATAGGGGCCAAAATGAGGGTTTCAGCTGCTATTACTATTTCCCAAATGGAAGGGATTACTTTA
CATACTACTAATTCAGTCGTATCTGTATAACGTGCACTAGCTTTTAACATGCAAATTTTATATGAAAAATCAAATCAAATC
Protein sequenceShow/hide protein sequence
MANTPPSHQTCIPLPSDSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVCKPALESTYVT
KVIHDCKRDSEALYFQFGIKLNNVIDTQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAP
EEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI