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Lsi08G015690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G015690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionArabinogalactan peptide
Genome locationchr08:23731495..23731683
RNA-Seq ExpressionLsi08G015690
SyntenyLsi08G015690
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585732.1 CXXC motif containing zinc binding protein, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1081.82Show/hide
Query:  SLMALIAIIFAVVSVAAQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI
        SLMALIA+I AV SVAAQEAPAPSP SPA+SIAPSFVSAC A FVA+  GSTLRI
Subjt:  SLMALIAIIFAVVSVAAQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI

KAG6591454.1 hypothetical protein SDJN03_13800, partial [Cucurbita argyrosperma subsp. sororia]4.2e-0760.94Show/hide
Query:  MAAVSKVSLMALIAIIFAVVSVA---AQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLR
        MAAVSK S MAL+A++F VVSVA   + E+PAP+P SPATS+ PS   AC+ AFVA+ FGS L+
Subjt:  MAAVSKVSLMALIAIIFAVVSVA---AQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLR

KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]4.6e-1483.87Show/hide
Query:  MAAVSKVSLMALIAIIFAVVSVAAQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI
        MA VS+ SL+ALIAI+FAV SVAA EAPAPSP SPATSIAPSFVSAC+AAFVA+AFGSTLRI
Subjt:  MAAVSKVSLMALIAIIFAVVSVAAQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI

KAG7024335.1 hypothetical protein SDJN02_13149, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-0760.94Show/hide
Query:  MAAVSKVSLMALIAIIFAVVSVA---AQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLR
        MAAVSK S MAL+A++F VVSVA   + E+PAP+P SPATS+ PS   AC+ AFVA+ FGS L+
Subjt:  MAAVSKVSLMALIAIIFAVVSVA---AQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLR

KGN62403.1 hypothetical protein Csa_018595 [Cucumis sativus]2.7e-1485.48Show/hide
Query:  MAAVSKVSLMALIAIIFAVVSVAAQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI
        MAA+SKVSL+ALIA+IFA+ SVAAQEAPAPSP SPATSIAPS VSACLAAF+A+AFGSTLRI
Subjt:  MAAVSKVSLMALIAIIFAVVSVAAQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI

TrEMBL top hitse value%identityAlignment
A0A0A0LKU1 Uncharacterized protein1.3e-1485.48Show/hide
Query:  MAAVSKVSLMALIAIIFAVVSVAAQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI
        MAA+SKVSL+ALIA+IFA+ SVAAQEAPAPSP SPATSIAPS VSACLAAF+A+AFGSTLRI
Subjt:  MAAVSKVSLMALIAIIFAVVSVAAQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI

A0A2K3JRT7 Uncharacterized protein5.0e-0657.38Show/hide
Query:  AVSKVSLMALIAIIFAVVSVA-AQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI
        A + + ++A +A+IF+V+S+A A +APAPSPTSPAT+++PSFV+  +AA  A+AFGSTLRI
Subjt:  AVSKVSLMALIAIIFAVVSVA-AQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI

A0A2P5EL16 Arabinogalactan peptide8.5e-0658.06Show/hide
Query:  SKVSLMALIAIIFAVVSVA----AQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI
        S  SL+ L+A+I  V+SV     A EAPAPSP SPA++I+PSF+SACLAA VA+ FGS +R+
Subjt:  SKVSLMALIAIIFAVVSVA----AQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI

A0A5N5HNG8 Uncharacterized protein2.9e-0663.49Show/hide
Query:  AVSKV-SLMALIAIIFAVVSV--AAQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI
        AVSK  S++AL+A++FAV+S   AAQE+PAPSPTSPA SI PSFVSA +A    +AFGS LR+
Subjt:  AVSKV-SLMALIAIIFAVVSV--AAQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI

Q96504 CRG161.0e-0659.38Show/hide
Query:  MAAVSKVSLMALIAIIFAVVSVA---AQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLR
        MAAVSKVS MAL+A++FAV+SVA   + E+PAP P SPA S+ PS   AC+ AF+A+ FGS L+
Subjt:  MAAVSKVSLMALIAIIFAVVSVA---AQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLR

SwissProt top hitse value%identityAlignment
Q9LYF6 Arabinogalactan protein 151.3e-0655Show/hide
Query:  AVSKVSLMALIAIIFAVVSVAAQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI
        A+SK S++ L+ +I +VV+ A  EAPAPSPTS +++I+ SFVSA +AA  A+ FGS LRI
Subjt:  AVSKVSLMALIAIIFAVVSVAAQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI

Arabidopsis top hitse value%identityAlignment
AT5G11740.1 arabinogalactan protein 159.0e-0855Show/hide
Query:  AVSKVSLMALIAIIFAVVSVAAQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI
        A+SK S++ L+ +I +VV+ A  EAPAPSPTS +++I+ SFVSA +AA  A+ FGS LRI
Subjt:  AVSKVSLMALIAIIFAVVSVAAQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGTTTCCAAAGTTTCTCTCATGGCTCTCATTGCCATCATCTTCGCCGTTGTCTCCGTCGCCGCTCAGGAGGCTCCAGCCCCCAGCCCGACCTCCCCTGCCAC
CTCCATTGCTCCGTCGTTCGTCTCCGCTTGCCTCGCTGCCTTCGTTGCTATCGCCTTCGGATCTACTCTCAGGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGTTTCCAAAGTTTCTCTCATGGCTCTCATTGCCATCATCTTCGCCGTTGTCTCCGTCGCCGCTCAGGAGGCTCCAGCCCCCAGCCCGACCTCCCCTGCCAC
CTCCATTGCTCCGTCGTTCGTCTCCGCTTGCCTCGCTGCCTTCGTTGCTATCGCCTTCGGATCTACTCTCAGGATCTGA
Protein sequenceShow/hide protein sequence
MAAVSKVSLMALIAIIFAVVSVAAQEAPAPSPTSPATSIAPSFVSACLAAFVAIAFGSTLRI