; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G015710 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G015710
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionras guanine nucleotide exchange factor P-like isoform X2
Genome locationchr08:23737151..23739195
RNA-Seq ExpressionLsi08G015710
SyntenyLsi08G015710
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060988.1 homeobox protein 4-like [Cucumis melo var. makuwa]1.9e-6388Show/hide
Query:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKD
        MEK+HLRINSHG+F+++NLNGRDRTA+DSSLLLRARSEAA VAVATRPQP PSEFVLQWGNRKRLRCMKVQVKAKDVSA APAHRTTVRVDRRVVRADKD
Subjt:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKD

Query:  SIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS
        SII  NHQ SSN NLN SNGYLNLRQRPISPQPPVLPPP APS RIL  S
Subjt:  SIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS

XP_004142918.1 uncharacterized protein LOC101215839 [Cucumis sativus]4.5e-6590Show/hide
Query:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKD
        MEK++LRINSHG+FV+NNLNGRDRT+VDSSLLLRARSEAA VAVATRPQPTPSEFVLQWGNRKRLRCMKV VKAKDVSAAAPAHRTTVRVDRRVVRADKD
Subjt:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKD

Query:  SIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS
        SII  NHQ +SNHNLN SNGYLNLRQRPISPQPPVLPPP APSQRIL  S
Subjt:  SIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS

XP_008444489.1 PREDICTED: uncharacterized protein LOC103487794 [Cucumis melo]1.9e-6388Show/hide
Query:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKD
        MEK+HLRINSHG+F+++NLNGRDRTA+DSSLLLRARSEAA VAVATRPQP PSEFVLQWGNRKRLRCMKVQVKAKDVSA APAHRTTVRVDRRVVRADKD
Subjt:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKD

Query:  SIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS
        SII  NHQ SSN NLN SNGYLNLRQRPISPQPPVLPPP APS RIL  S
Subjt:  SIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS

XP_023546112.1 uncharacterized protein LOC111805325 [Cucurbita pepo subsp. pepo]3.2e-6388.16Show/hide
Query:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVS-AAAPAHRTTVRVDRRVVRADK
        MEKDHLRINSHGSFV+NNLNGRDRTAVDSSLLLRARSEAAA AVATRPQPTPSEFVLQWGN KRLRCMKVQVKA+DVS AAAP H+TTVRVDRRVVRAD+
Subjt:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVS-AAAPAHRTTVRVDRRVVRADK

Query:  DSIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVL-PPPSAPSQRILSRS
        DSII QNHQ SS HN NHSNG+LNLRQRPISPQPP L PPP APSQRIL  S
Subjt:  DSIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVL-PPPSAPSQRILSRS

XP_038885678.1 uncharacterized protein LOC120075985 [Benincasa hispida]4.7e-7095.36Show/hide
Query:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKD
        MEKDHLRINSHGSFVNNNLNGRDRTAVD SLLLRARSEAAAVAVA RPQPT SEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKD
Subjt:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKD

Query:  SIITQN-HQASSNHNLNHSNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS
        SIITQN HQASSNHNLNHSNGYLNLRQRPISPQPPVLPPP APSQRIL  S
Subjt:  SIITQN-HQASSNHNLNHSNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS

TrEMBL top hitse value%identityAlignment
A0A0A0LNM6 Uncharacterized protein2.2e-6590Show/hide
Query:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKD
        MEK++LRINSHG+FV+NNLNGRDRT+VDSSLLLRARSEAA VAVATRPQPTPSEFVLQWGNRKRLRCMKV VKAKDVSAAAPAHRTTVRVDRRVVRADKD
Subjt:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKD

Query:  SIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS
        SII  NHQ +SNHNLN SNGYLNLRQRPISPQPPVLPPP APSQRIL  S
Subjt:  SIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS

A0A1S4DWI1 uncharacterized protein LOC1034877949.2e-6488Show/hide
Query:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKD
        MEK+HLRINSHG+F+++NLNGRDRTA+DSSLLLRARSEAA VAVATRPQP PSEFVLQWGNRKRLRCMKVQVKAKDVSA APAHRTTVRVDRRVVRADKD
Subjt:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKD

Query:  SIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS
        SII  NHQ SSN NLN SNGYLNLRQRPISPQPPVLPPP APS RIL  S
Subjt:  SIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS

A0A5A7V0B3 Homeobox protein 4-like9.2e-6488Show/hide
Query:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKD
        MEK+HLRINSHG+F+++NLNGRDRTA+DSSLLLRARSEAA VAVATRPQP PSEFVLQWGNRKRLRCMKVQVKAKDVSA APAHRTTVRVDRRVVRADKD
Subjt:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKD

Query:  SIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS
        SII  NHQ SSN NLN SNGYLNLRQRPISPQPPVLPPP APS RIL  S
Subjt:  SIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS

A0A6J1HEC4 uncharacterized protein LOC1114627169.5e-6185.71Show/hide
Query:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVS-AAAPAHRTTVRVDRRVVRADK
        MEKDHLRINSHGSFV+NNLNGRDRTAVDSSLLLRARSEA   AVATRPQPTPSEFVLQWGN KRLRCMKVQVKA+DVS AAAP H+TTVRVDRRVVRAD+
Subjt:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVS-AAAPAHRTTVRVDRRVVRADK

Query:  DSIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVL---PPPSAPSQRILSRS
        DSII QNHQ SS HN NHSNG+LNLRQRPISPQPP L   PPP APSQRIL  S
Subjt:  DSIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVL---PPPSAPSQRILSRS

A0A6J1KC32 uncharacterized protein LOC1114925166.0e-6387.5Show/hide
Query:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVS-AAAPAHRTTVRVDRRVVRADK
        MEKDHLRINSHGSFV+NNLNGRDRTAVDSSLLLRARSEAAA AVATRPQPTPSEFVLQWGN KRLRCMKVQVKA+DVS AAAP H+TTVRVDRRVVRAD+
Subjt:  MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVS-AAAPAHRTTVRVDRRVVRADK

Query:  DSIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVL-PPPSAPSQRILSRS
        DSII QNHQ S  HN NHSNG+LNLRQRPISPQPP L PPP APSQRIL  S
Subjt:  DSIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVL-PPPSAPSQRILSRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGACCATCTCAGAATCAATAGCCATGGGAGTTTCGTCAATAATAATCTCAACGGTAGGGACAGAACCGCCGTGGACAGTTCGCTGTTGTTACGAGCGAGATC
CGAGGCCGCTGCCGTCGCCGTCGCAACCAGGCCGCAACCCACGCCGTCGGAGTTCGTGTTACAATGGGGAAATCGAAAGCGTCTCCGGTGTATGAAAGTCCAGGTCAAGG
CTAAGGATGTTTCCGCCGCAGCACCGGCTCACAGAACCACCGTCCGAGTGGACCGGCGGGTCGTTAGAGCCGATAAAGACTCAATTATAACCCAGAACCACCAGGCGAGT
TCCAATCATAACCTTAACCACAGTAATGGGTATTTGAATCTCCGTCAACGGCCGATTTCTCCTCAACCGCCAGTTCTACCGCCGCCGTCAGCTCCATCTCAGCGTATTCT
AAGCCGATCTTTGAGATTCTTTTTTCCCGGCCATGGGATTCAAAATCCCGATGTAATTTTTCTAATGGGCCTTTTTTATTTGGGCTTTTATTATGTTACAGGGCTTTCTA
CCCACTGA
mRNA sequenceShow/hide mRNA sequence
CATTGAGGAAGGACCTCTCTGTAGTACTTCTGTTAAATTTCCCTTCTAACTCTCTCTACATATTTATATTTCTCTCTCTTGATTCTCTGTAAATTTTCCCTTCATTTGAA
GCTTTCAAAATCACCTAAGAGCTCAAAATTTTCTTAGTTTTAGTGGGTTAATCGATCTAAGATGCTCGGTTCTTTGACGAGTTTTAAGGCATTGAAATTGTTGTAAGAGA
TGAGATAATCGAAGAGGGGAATTTGAATCTGGGTTCTGTTTTGTTGGCCGATTGTATACTCGATTTTTTTTCTTAATTGGGAGTTGAATTTCCGGAGAGGCGTGAGGGGG
AAGAGACTTCGAGTTTTGAAGATTAATATCCGAGCGATTTAGTGGTTTGTTGAGGGTTTTCTGAGAGATTTGTTACCTTTTTCGAAAGTGGAACAAGAATTGGACTTTGA
AAAATGCAATCGATTATCGGACTCTGGGATTTGGATTTACATTTCGCTTGTTTTCTGCGGTGAAAGAAGCAGATTTCTTTTCTTTGTGAGAGCTGAATCTTGAGGGGAAA
CCCCAGATCAGAAATTTCAGGTGGTGTATAATTAAGCAAATGGAGAAAGACCATCTCAGAATCAATAGCCATGGGAGTTTCGTCAATAATAATCTCAACGGTAGGGACAG
AACCGCCGTGGACAGTTCGCTGTTGTTACGAGCGAGATCCGAGGCCGCTGCCGTCGCCGTCGCAACCAGGCCGCAACCCACGCCGTCGGAGTTCGTGTTACAATGGGGAA
ATCGAAAGCGTCTCCGGTGTATGAAAGTCCAGGTCAAGGCTAAGGATGTTTCCGCCGCAGCACCGGCTCACAGAACCACCGTCCGAGTGGACCGGCGGGTCGTTAGAGCC
GATAAAGACTCAATTATAACCCAGAACCACCAGGCGAGTTCCAATCATAACCTTAACCACAGTAATGGGTATTTGAATCTCCGTCAACGGCCGATTTCTCCTCAACCGCC
AGTTCTACCGCCGCCGTCAGCTCCATCTCAGCGTATTCTAAGCCGATCTTTGAGATTCTTTTTTCCCGGCCATGGGATTCAAAATCCCGATGTAATTTTTCTAATGGGCC
TTTTTTATTTGGGCTTTTATTATGTTACAGGGCTTTCTACCCACTGA
Protein sequenceShow/hide protein sequence
MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKDSIITQNHQAS
SNHNLNHSNGYLNLRQRPISPQPPVLPPPSAPSQRILSRSLRFFFPGHGIQNPDVIFLMGLFYLGFYYVTGLSTH