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Lsi08G015880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G015880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlutaredoxin
Genome locationchr08:23881029..23881430
RNA-Seq ExpressionLsi08G015880
SyntenyLsi08G015880
Gene Ontology termsGO:0097573 - glutathione oxidoreductase activity (molecular function)
InterPro domainsIPR002109 - Glutaredoxin
IPR011905 - Glutaredoxin-like, plant II
IPR014025 - Glutaredoxin subgroup
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061003.1 glutaredoxin-C6-like isoform X2 [Cucumis melo var. makuwa]1.3e-5893.23Show/hide
Query:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        M    ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI EHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPVCL
        GASFGGLESLVALHLSGHLVPKLIEVGALPVCL
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPVCL

XP_004142929.1 glutaredoxin-C6 [Cucumis sativus]8.6e-5893.13Show/hide
Query:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        MH   ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI +HPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPV
        GASFGGLESLVALHLSGHLVPKLIEVGALPV
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPV

XP_008444458.1 PREDICTED: glutaredoxin-C6-like isoform X2 [Cucumis melo]3.3e-5793.13Show/hide
Query:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        M    ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI EHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPV
        GASFGGLESLVALHLSGHLVPKLIEVGALPV
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPV

XP_038885533.1 glutaredoxin-C6-like isoform X1 [Benincasa hispida]1.1e-6096.18Show/hide
Query:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        MH C NDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSR+SCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPV
        GASFGGLESLVALHLSGHL+PKLIEVGALPV
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPV

XP_038885534.1 glutaredoxin-C6-like isoform X2 [Benincasa hispida]2.4e-6096.15Show/hide
Query:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        MH C NDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSR+SCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALP
        GASFGGLESLVALHLSGHL+PKLIEVGALP
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALP

TrEMBL top hitse value%identityAlignment
A0A0A0LN11 Glutaredoxin4.2e-5893.13Show/hide
Query:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        MH   ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI +HPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPV
        GASFGGLESLVALHLSGHLVPKLIEVGALPV
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPV

A0A1S3BAG0 glutaredoxin-C6-like isoform X21.6e-5793.13Show/hide
Query:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        M    ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI EHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPV
        GASFGGLESLVALHLSGHLVPKLIEVGALPV
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPV

A0A5A7UYF1 Glutaredoxin-C6-like isoform X26.4e-5993.23Show/hide
Query:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        M    ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI EHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPVCL
        GASFGGLESLVALHLSGHLVPKLIEVGALPVCL
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPVCL

A0A6J1HEU7 glutaredoxin-C6-like2.7e-5793.13Show/hide
Query:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        M+ CANDVVSSE PPSPTSSSSLSIDVDESSE RIRRLI EHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIEL+DHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPV
        GASFGGLE+LVALHLSGHLVPKLIEVGAL V
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPV

A0A6J1KE42 glutaredoxin-C6-like2.1e-5793.13Show/hide
Query:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        M+ CANDVVSSE PPSPTSSSSLSIDVDESSE RIRRLI EHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIEL+DHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPV
        GASFGGLE+LVALHLSGHLVPKLIEVGAL V
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPV

SwissProt top hitse value%identityAlignment
Q0DK35 Glutaredoxin-C73.5e-2256.44Show/hide
Query:  ESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGA
        E    RI RL+ E PV+IF+R  C MCHVM+ LLA +G H TVIELD+  E AA   +S A  ++ PA+F+GGA  GGL+ L+ LHLSG LVP+L EVGA
Subjt:  ESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGA

Query:  L
        L
Subjt:  L

Q29PZ1 Glutaredoxin-C107.9e-3053.06Show/hide
Query:  MHGCANDVVSSEF-----------PPSP------TSSSSLSIDVDESSETRIRRLIAEHPVIIFSR-SSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAA
        +  C+ND V+ +            PP+P      T+S+SLS D +E+SE++I RLI+EHPVIIF+R SSC MCHVMK LL+ +GVHPTVIE+DD  EIA 
Subjt:  MHGCANDVVSSEF-----------PPSP------TSSSSLSIDVDESSETRIRRLIAEHPVIIFSR-SSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAA

Query:  VPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL
             +    +AP +FIGG   GG ESLVALHLSG L+P+L+EVGAL
Subjt:  VPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL

Q5SMY5 Monothiol glutaredoxin-S21.8e-1847.75Show/hide
Query:  SLSID---VDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGH
        SL+ID    +E+   R+ RL+ E PV++F+R  C M HVM+ LLA +G H TVIEL+     A    ++    ++ PA+F+GG   GGLE L+ LHLSG 
Subjt:  SLSID---VDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGH

Query:  LVPKLIEVGAL
        LVP+L EVGAL
Subjt:  LVPKLIEVGAL

Q7G8Y5 Glutaredoxin-C11.9e-1545.45Show/hide
Query:  RIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDH---DEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL
        R+ RL A+  V+IFS SSC MCH +  L   +GV+PTV+ELD+     E+    +    R  + PAVFIGG   G  + +++LHLSG+LVP L   GAL
Subjt:  RIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDH---DEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL

Q8L9S3 Glutaredoxin-C68.1e-3565.41Show/hide
Query:  ANDVVSSEF-PPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVP-------SSSFARDSSAPA
        +NDVV  +  PPS TSS+SLSID +ES+E +IRRLI+EHPVIIFSRSSC MCHVMK LLA IGV PTVIELDDH E++++P       S   +     PA
Subjt:  ANDVVSSEF-PPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVP-------SSSFARDSSAPA

Query:  VFIGGASFGGLESLVALHLSGHLVPKLIEVGAL
        VFIG    GGLESLVALHLSG LVPKL++VGAL
Subjt:  VFIGGASFGGLESLVALHLSGHLVPKLIEVGAL

Arabidopsis top hitse value%identityAlignment
AT1G28480.1 Thioredoxin superfamily protein1.5e-1539.82Show/hide
Query:  LSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDH------DEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLS
        LS+    + E R+R ++ E+ VI+  R  C MCHV++ LL  +GV+P V+E+D+        E+  +           PAV++GG  FGGL+ ++A H+S
Subjt:  LSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDH------DEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLS

Query:  GHLVPKLIEVGAL
        G LVP L EVGAL
Subjt:  GHLVPKLIEVGAL

AT4G15680.1 Thioredoxin superfamily protein1.8e-1339.8Show/hide
Query:  RIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPS--SSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL
        +++++I+E  V+IFS++SC M H +KTL    GV+PT+ ELD+ +    +    +      + P VFIGG   GG   +++LHL+  LVP L  VGAL
Subjt:  RIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPS--SSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL

AT4G33040.1 Thioredoxin superfamily protein5.8e-3665.41Show/hide
Query:  ANDVVSSEF-PPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVP-------SSSFARDSSAPA
        +NDVV  +  PPS TSS+SLSID +ES+E +IRRLI+EHPVIIFSRSSC MCHVMK LLA IGV PTVIELDDH E++++P       S   +     PA
Subjt:  ANDVVSSEF-PPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVP-------SSSFARDSSAPA

Query:  VFIGGASFGGLESLVALHLSGHLVPKLIEVGAL
        VFIG    GGLESLVALHLSG LVPKL++VGAL
Subjt:  VFIGGASFGGLESLVALHLSGHLVPKLIEVGAL

AT5G11930.1 Thioredoxin superfamily protein5.6e-3153.06Show/hide
Query:  MHGCANDVVSSEF-----------PPSP------TSSSSLSIDVDESSETRIRRLIAEHPVIIFSR-SSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAA
        +  C+ND V+ +            PP+P      T+S+SLS D +E+SE++I RLI+EHPVIIF+R SSC MCHVMK LL+ +GVHPTVIE+DD  EIA 
Subjt:  MHGCANDVVSSEF-----------PPSP------TSSSSLSIDVDESSETRIRRLIAEHPVIIFSR-SSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAA

Query:  VPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL
             +    +AP +FIGG   GG ESLVALHLSG L+P+L+EVGAL
Subjt:  VPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL

AT5G18600.1 Thioredoxin superfamily protein8.1e-1441.24Show/hide
Query:  IRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSS--APAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL
        I +++ E PV+I+S+SSC M H +KTLL   G +P V ELD+      +  +      S   P VFIGG   GG   +++LHL+G L+P L   GAL
Subjt:  IRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSS--APAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACGGTTGCGCAAACGACGTCGTATCCTCTGAATTTCCTCCTTCTCCGACCTCCTCCTCCTCCCTATCCATCGACGTTGATGAATCGTCGGAAACTCGGATCCGGCG
GCTGATTGCAGAGCATCCGGTGATCATATTCAGCCGCTCCTCTTGCAGCATGTGCCACGTCATGAAAACTCTCCTTGCCATCATCGGCGTCCATCCCACCGTCATCGAAC
TTGACGATCACGACGAAATCGCCGCTGTTCCTTCTTCTTCTTTTGCTCGGGACAGTTCGGCGCCGGCTGTTTTCATCGGCGGGGCTAGCTTCGGCGGCTTGGAATCTCTC
GTTGCTCTCCATCTTAGCGGCCATCTTGTTCCTAAACTTATCGAAGTTGGAGCTCTCCCGGTATGCCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACGGTTGCGCAAACGACGTCGTATCCTCTGAATTTCCTCCTTCTCCGACCTCCTCCTCCTCCCTATCCATCGACGTTGATGAATCGTCGGAAACTCGGATCCGGCG
GCTGATTGCAGAGCATCCGGTGATCATATTCAGCCGCTCCTCTTGCAGCATGTGCCACGTCATGAAAACTCTCCTTGCCATCATCGGCGTCCATCCCACCGTCATCGAAC
TTGACGATCACGACGAAATCGCCGCTGTTCCTTCTTCTTCTTTTGCTCGGGACAGTTCGGCGCCGGCTGTTTTCATCGGCGGGGCTAGCTTCGGCGGCTTGGAATCTCTC
GTTGCTCTCCATCTTAGCGGCCATCTTGTTCCTAAACTTATCGAAGTTGGAGCTCTCCCGGTATGCCTCTAG
Protein sequenceShow/hide protein sequence
MHGCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESL
VALHLSGHLVPKLIEVGALPVCL