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Lsi08G015970 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G015970
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:23942585..23944379
RNA-Seq ExpressionLsi08G015970
SyntenyLsi08G015970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD30557.1 TPA_asm: hypothetical protein HUJ06_009408 [Nelumbo nucifera]1.4e-1970.13Show/hide
Query:  IGRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS
        +GRP+P PPQLLH +RPDP   R PTSPSD R H  +TRPVPLQ GHLG  PA+G FCS+TDFT TAPA T RPVAS
Subjt:  IGRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS

KAF1867924.1 hypothetical protein Lal_00042438 [Lupinus albus]5.4e-1666.23Show/hide
Query:  IGRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS
        +GRP+P PPQLL  +RP+P     PTSPSD R  RHVTRPVPL  G  G  PA+G F SMTDFT TAPA TLRPVAS
Subjt:  IGRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS

KAF4404782.1 hypothetical protein G4B88_006168 [Cannabis sativa]1.3e-1767.53Show/hide
Query:  GRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLG-IIPAVGSFCSMTDFTTTAPASTLRPVAS
        GRP+P PPQLL  I PDPEH RHPTSPSDHR  +  TRPVPLQ GHLG   PA+G F S+TD T  APA+TL PVA+
Subjt:  GRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLG-IIPAVGSFCSMTDFTTTAPASTLRPVAS

PON32663.1 hypothetical protein TorRG33x02_356110 [Trema orientale]3.4e-1870.13Show/hide
Query:  IGRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS
        +GRP+P PPQLLH I PDPE  RHPTSPSDHR  R  TRPVPLQ GHLG  PA+G F S+ D T TAPASTL PVA+
Subjt:  IGRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS

PON50670.1 hypothetical protein PanWU01x14_222030 [Parasponia andersonii]3.4e-1870.13Show/hide
Query:  IGRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS
        +GRP+P PPQLLH I PDPE  RHPTSPSDHR  R  T PVPLQ GHLG  PA+G F S+TD T TAPASTL PVA+
Subjt:  IGRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS

TrEMBL top hitse value%identityAlignment
A0A2P5A802 Uncharacterized protein1.6e-1870.13Show/hide
Query:  IGRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS
        +GRP+P PPQLLH I PDPE  RHPTSPSDHR  R  TRPVPLQ GHLG  PA+G F S+ D T TAPASTL PVA+
Subjt:  IGRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS

A0A2P5BPH4 Uncharacterized protein1.6e-1870.13Show/hide
Query:  IGRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS
        +GRP+P PPQLLH I PDPE  RHPTSPSDHR  R  T PVPLQ GHLG  PA+G F S+TD T TAPASTL PVA+
Subjt:  IGRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS

A0A6A5LZS3 Uncharacterized protein2.6e-1666.23Show/hide
Query:  IGRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS
        +GRP+P PPQLL  +RP+P     PTSPSD R  RHVTRPVPL  G  G  PA+G F SMTDFT TAPA TLRPVAS
Subjt:  IGRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS

A0A7C9CHT2 Uncharacterized protein1.2e-1667.11Show/hide
Query:  GRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS
        GRP+P PPQLL DI PDP   R P SPSD R  +H TRP PLQ GHLG  PA+G + SMTDFT  APASTLRPVA+
Subjt:  GRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS

A0A7J6IB08 Uncharacterized protein6.2e-1867.53Show/hide
Query:  GRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLG-IIPAVGSFCSMTDFTTTAPASTLRPVAS
        GRP+P PPQLL  I PDPEH RHPTSPSDHR  +  TRPVPLQ GHLG   PA+G F S+TD T  APA+TL PVA+
Subjt:  GRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLG-IIPAVGSFCSMTDFTTTAPASTLRPVAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGTTGGTTAGTCGATAATTGTAAGGTGATCGGCCGCCCTCTTCCGCCACCACCACAACTTCTGCACGACATCCGACCCGACCCGGAACATGATCGGCACCCAAC
ATCTCCATCCGACCACCGGGCACATAGGCATGTGACCCGACCCGTGCCATTACAAGCCGGACACCTCGGCATCATCCCGGCCGTCGGTAGTTTCTGTTCGATGACGGACT
TCACCACCACGGCGCCGGCCAGCACGCTCAGGCCGGTGGCAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGTTGGTTAGTCGATAATTGTAAGGTGATCGGCCGCCCTCTTCCGCCACCACCACAACTTCTGCACGACATCCGACCCGACCCGGAACATGATCGGCACCCAAC
ATCTCCATCCGACCACCGGGCACATAGGCATGTGACCCGACCCGTGCCATTACAAGCCGGACACCTCGGCATCATCCCGGCCGTCGGTAGTTTCTGTTCGATGACGGACT
TCACCACCACGGCGCCGGCCAGCACGCTCAGGCCGGTGGCAAGCTGA
Protein sequenceShow/hide protein sequence
MKSWLVDNCKVIGRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS