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Lsi08G016110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G016110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNADH-ubiquinone reductase complex 1 MLRQ subunit
Genome locationchr08:24066698..24067359
RNA-Seq ExpressionLsi08G016110
SyntenyLsi08G016110
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010530 - NADH-ubiquinone reductase complex 1 MLRQ subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142944.1 uncharacterized protein LOC101222643 [Cucumis sativus]1.3e-4195.51Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MATANRWLKPEVYPLFA+VGVAVGIC MQLVRNITTNPEVRVIKE+R AGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
XP_016900034.1 PREDICTED: uncharacterized protein LOC107990723 [Cucumis melo]2.9e-4195.51Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MATANRWLKPEVYPLFA+VGVAVGIC MQLVRNITTNPEVRVIKE+R AGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
XP_022961943.1 uncharacterized protein LOC111462563 [Cucurbita moschata]1.3e-4195.51Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MATANRWLKPEVYPLFA VGVAVGICGMQLVRNITTNPEVRV KE+R AGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
XP_023545968.1 uncharacterized protein LOC111805233 [Cucurbita pepo subsp. pepo]2.9e-4194.38Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MATANRWLKPEVYPLFA VGVAVGICGMQLVRNITTNPEVRV K++R AGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
XP_038885463.1 uncharacterized protein LOC120075838 [Benincasa hispida]8.9e-4397.75Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MA+ANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDN+EEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
TrEMBL top hitse value%identityAlignment
A0A0A0LMX7 Uncharacterized protein6.2e-4295.51Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MATANRWLKPEVYPLFA+VGVAVGIC MQLVRNITTNPEVRVIKE+R AGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
A0A1S4DVM4 uncharacterized protein LOC1079907231.4e-4195.51Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MATANRWLKPEVYPLFA+VGVAVGIC MQLVRNITTNPEVRVIKE+R AGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
A0A6J1BUB6 uncharacterized protein LOC1110048292.4e-4195.51Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MA  NRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKR AGVLDNFEEGEKYAEHGLRKFLRTR PQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
A0A6J1HDB5 uncharacterized protein LOC1114625636.2e-4295.51Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MATANRWLKPEVYPLFA VGVAVGICGMQLVRNITTNPEVRV KE+R AGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
A0A6P4AFV5 uncharacterized protein LOC1074283741.4e-3888.76Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MAT NRWL+PEVYPLFA+VGVAVGICGMQLVRNITTNPEVRV KE R AGVLDN +EGEKYAEHGLRKFLR RPPQIMPSIN FFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29970.1 B12D protein2.9e-2355.56Show/hide
Query:  RWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFS
        RW++PEVYPL  A+G    +   QL RN   NP+ R+ KE R  G+L+N +EGEKYA+H  RK+LRTR PQ+MPS+N+FFS
Subjt:  RWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFS
AT3G48140.1 B12D protein3.7e-3169.41Show/hide
Query:  ANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDP
        A+RWL+PEVYPLFAA GVAVGIC   L+RNIT NPEVR  KE R AG+LDN  EGEKY E+ LRKF+R + P+IMP +NKFF+DP
Subjt:  ANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGCCAACAGATGGTTAAAGCCTGAGGTGTATCCTCTCTTTGCTGCAGTTGGTGTGGCTGTTGGCATCTGTGGGATGCAGCTTGTTAGAAACATAACCACCAA
TCCTGAAGTCAGGGTTATCAAAGAGAAGAGAACTGCTGGAGTGCTTGACAACTTTGAAGAAGGTGAGAAGTATGCAGAGCATGGCCTTAGGAAGTTCCTTAGAACAAGAC
CCCCTCAGATTATGCCCTCCATCAACAAATTCTTCTCAGATCCAAACTAA
mRNA sequenceShow/hide mRNA sequence
TTCACAACCTTTTTTCTTTCCCTTTCCTTATAAATTTCCACATCAAAACATGCCTCCGCCGCTGCATCTTTCTTCATCCTTCTTCAAATTCTTCTTCTAAAGAAGGGTCA
TTCTCTTCTCTATATTGCCATGGCCACCGCCAACAGATGGTTAAAGCCTGAGGTGTATCCTCTCTTTGCTGCAGTTGGTGTGGCTGTTGGCATCTGTGGGATGCAGCTTG
TTAGAAACATAACCACCAATCCTGAAGTCAGGGTTATCAAAGAGAAGAGAACTGCTGGAGTGCTTGACAACTTTGAAGAAGGTGAGAAGTATGCAGAGCATGGCCTTAGG
AAGTTCCTTAGAACAAGACCCCCTCAGATTATGCCCTCCATCAACAAATTCTTCTCAGATCCAAACTAA
Protein sequenceShow/hide protein sequence
MATANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVIKEKRTAGVLDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN