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Lsi08G016490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G016490
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:24332067..24332342
RNA-Seq ExpressionLsi08G016490
SyntenyLsi08G016490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061064.1 hypothetical protein E6C27_scaffold501G002020 [Cucumis melo var. makuwa]1.3e-2071.72Show/hide
Query:  MVMSEDERGGLFLKTKPNAAE-MDKDQEEQPTTPTSEEFRIG--VPN-LTCPPPPKKPKSLPGPITMSCT--LHNNNG-GKYFIPYSQLQ-AFFASTSS
        MV+SEDER  LFLK KP  A+  + D EEQPTTPTSEEFRIG  V N LTCPPPP+KPKSLPGPITMS T  LHNNN   KYF  YS+L  AFFASTSS
Subjt:  MVMSEDERGGLFLKTKPNAAE-MDKDQEEQPTTPTSEEFRIG--VPN-LTCPPPPKKPKSLPGPITMSCT--LHNNNG-GKYFIPYSQLQ-AFFASTSS
KGN62317.1 hypothetical protein Csa_018773 [Cucumis sativus]2.4e-1968.04Show/hide
Query:  MVMSEDER-GGLFLKTKPNAAEMDKDQEEQPTTPTSEEFRIG-VPN-LTCPPPPKKPKSLPGPITMSCTL---HNNNGGKYFIPYSQLQA-FFASTS
        MV+SEDER   L +K KP  A  D ++ EQPTTPTSEEFRIG V N L CPPPP+KPKSLPGPITMS T    +NNNG KYF  YS+LQA FFASTS
Subjt:  MVMSEDER-GGLFLKTKPNAAEMDKDQEEQPTTPTSEEFRIG-VPN-LTCPPPPKKPKSLPGPITMSCTL---HNNNGGKYFIPYSQLQA-FFASTS
TrEMBL top hitse value%identityAlignment
A0A0A0LNC7 Uncharacterized protein1.2e-1968.04Show/hide
Query:  MVMSEDER-GGLFLKTKPNAAEMDKDQEEQPTTPTSEEFRIG-VPN-LTCPPPPKKPKSLPGPITMSCTL---HNNNGGKYFIPYSQLQA-FFASTS
        MV+SEDER   L +K KP  A  D ++ EQPTTPTSEEFRIG V N L CPPPP+KPKSLPGPITMS T    +NNNG KYF  YS+LQA FFASTS
Subjt:  MVMSEDER-GGLFLKTKPNAAEMDKDQEEQPTTPTSEEFRIG-VPN-LTCPPPPKKPKSLPGPITMSCTL---HNNNGGKYFIPYSQLQA-FFASTS
A0A5A7V162 Uncharacterized protein6.2e-2171.72Show/hide
Query:  MVMSEDERGGLFLKTKPNAAE-MDKDQEEQPTTPTSEEFRIG--VPN-LTCPPPPKKPKSLPGPITMSCT--LHNNNG-GKYFIPYSQLQ-AFFASTSS
        MV+SEDER  LFLK KP  A+  + D EEQPTTPTSEEFRIG  V N LTCPPPP+KPKSLPGPITMS T  LHNNN   KYF  YS+L  AFFASTSS
Subjt:  MVMSEDERGGLFLKTKPNAAE-MDKDQEEQPTTPTSEEFRIG--VPN-LTCPPPPKKPKSLPGPITMSCT--LHNNNG-GKYFIPYSQLQ-AFFASTSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATGTCCGAGGATGAGCGCGGTGGCTTGTTTTTGAAAACCAAGCCAAATGCAGCGGAGATGGATAAGGATCAGGAAGAACAACCAACTACTCCAACCAGTGAAGA
GTTTAGAATTGGAGTGCCTAATTTGACCTGCCCTCCACCGCCGAAGAAGCCCAAATCTCTCCCTGGCCCCATCACCATGAGTTGTACTCTCCACAACAATAATGGCGGCA
AATACTTCATTCCCTACTCTCAACTACAGGCCTTCTTCGCCTCCACTTCTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGATGTCCGAGGATGAGCGCGGTGGCTTGTTTTTGAAAACCAAGCCAAATGCAGCGGAGATGGATAAGGATCAGGAAGAACAACCAACTACTCCAACCAGTGAAGA
GTTTAGAATTGGAGTGCCTAATTTGACCTGCCCTCCACCGCCGAAGAAGCCCAAATCTCTCCCTGGCCCCATCACCATGAGTTGTACTCTCCACAACAATAATGGCGGCA
AATACTTCATTCCCTACTCTCAACTACAGGCCTTCTTCGCCTCCACTTCTTCATAA
Protein sequenceShow/hide protein sequence
MVMSEDERGGLFLKTKPNAAEMDKDQEEQPTTPTSEEFRIGVPNLTCPPPPKKPKSLPGPITMSCTLHNNNGGKYFIPYSQLQAFFASTSS