; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G016510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G016510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein POOR HOMOLOGOUS SYNAPSIS 1
Genome locationchr08:24338524..24340434
RNA-Seq ExpressionLsi08G016510
SyntenyLsi08G016510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020096.1 Protein POOR-likeOUS SYNAPSIS 1, partial [Cucurbita argyrosperma subsp. argyrosperma]9.0e-11173.67Show/hide
Query:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTS----------TNLRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDMILVVRLRDN
        MAGFEG  QSKE+ EM F AIRDQWE+QFSRFV +PS++STS          TNLRPLL  ARNR PRGTWISSSST  LQLLHHCS SD+IL VR RD 
Subjt:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTS----------TNLRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDMILVVRLRDN

Query:  ILEEHFLSKLHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEA----SRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSP
        ILEEH+LSKLHFSWPQ+ C+SGFPARGTRTIFGSYRDS DEA    S  IQKFALRFSTS E D+FV+I+K MS+ A DIQPIS DF S IS+     + 
Subjt:  ILEEHFLSKLHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEA----SRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSP

Query:  NRPSDSLSEELSNSTVLQPYTPEMPLSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ
        NRPSDSLSEELSNSTVLQPYTPEMP SL+DT E YS SQE N H DHL+SIFAALPPSFTSM+SNCSDVK+  TAT  SA KD DLKSQIMKCMEDSSFQ
Subjt:  NRPSDSLSEELSNSTVLQPYTPEMPLSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ

XP_022951934.1 protein POOR HOMOLOGOUS SYNAPSIS 1 [Cucurbita moschata]1.2e-11073Show/hide
Query:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTS--------------TNLRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDMILVVR
        MAGFEG  QSKE+ EM F AIRDQWE+QFSRFV +PS++STS              TNLRPLL  AR+R PRGTWISSSST  LQLLHHCS SD+IL VR
Subjt:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTS--------------TNLRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDMILVVR

Query:  LRDNILEEHFLSKLHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSP
         RD ILEEH+LSKLHFSWPQ+ C+SGFP RGTRTIFGSYRDS DE    IQKFALRFSTS E D+FV+I+K MS+ A DIQPISCDF S IS+     + 
Subjt:  LRDNILEEHFLSKLHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSP

Query:  NRPSDSLSEELSNSTVLQPYTPEMPLSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ
        NRPSDSLSEELSNSTVLQPYTPEMPLSL+DT E YS SQE N H DHL+SIFAALPPSFTSM+SNCSDVK+  TAT  SA KD DLKSQIMKCMEDSSFQ
Subjt:  NRPSDSLSEELSNSTVLQPYTPEMPLSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ

XP_023002655.1 protein POOR HOMOLOGOUS SYNAPSIS 1 [Cucurbita maxima]9.0e-11174.74Show/hide
Query:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTS------TNLRPLLPYARNRL-PRGTWISSSSTVFLQLLHHCSTSDMILVVRLRDNILE
        MAGFEG  QSKE+AEM F AIRDQWE+QFSRFV +P+++STS      TNLRPLL  AR+R  PRGTWISSSST  LQLLHHCS SD IL VR RD ILE
Subjt:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTS------TNLRPLLPYARNRL-PRGTWISSSSTVFLQLLHHCSTSDMILVVRLRDNILE

Query:  EHFLSKLHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSPNRPSDSL
        EH+LSKLHFSWPQ+ C+SGFPARGTRT+FGSYRDS DE    IQKFALRFSTS E D+FV+I+K MS+ A DIQPISCDF S IS+     + NRPSDSL
Subjt:  EHFLSKLHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSPNRPSDSL

Query:  SEELSNSTVLQPYTPEMPLSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ
        SEELSNSTVLQPYTPEMPLSL+DT E YS SQE N H DHL+SIFAALPPSFTSM+SNCSDVK+  TAT  SA KD DLKSQIMKCMEDSSFQ
Subjt:  SEELSNSTVLQPYTPEMPLSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ

XP_023538055.1 protein POOR HOMOLOGOUS SYNAPSIS 1 [Cucurbita pepo subsp. pepo]4.3e-11375.51Show/hide
Query:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTS--------TNLRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDMILVVRLRDNIL
        MAGFEG  QSKE+AEM F AIRDQWE+QFSRFV +PS++STS        TNLRPLL  ARNR PRGTWISSSST  LQLLHHCS SD+IL VR RD IL
Subjt:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTS--------TNLRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDMILVVRLRDNIL

Query:  EEHFLSKLHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSPNRPSDS
        EEH+LSKLHFSWPQ+ C+SGFPARGTRTIFGSYRDS DE    IQKFALRFSTS E D+FV+I+K MS+ A DIQPISCDF S IS+     + NRPSDS
Subjt:  EEHFLSKLHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSPNRPSDS

Query:  LSEELSNSTVLQPYTPEMPLSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ
        LSEELSNSTVLQPYTPEMPLSL+DT E YS SQE N H DHL+SIFAALPPSFTSM+SNCSDVK+  TAT  SA KD DLKSQIMKCMEDSSFQ
Subjt:  LSEELSNSTVLQPYTPEMPLSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ

XP_038886143.1 protein POOR HOMOLOGOUS SYNAPSIS 1-like [Benincasa hispida]2.3e-13086.41Show/hide
Query:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTSTNLRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDMILVVRLRDNILEEHFLSKL
        MAGFEG  QSKEQA+MS GAIRDQWEIQFSRFV +P+SSST+ NLRPLLP+ARNR PRGTWISSSSTVFLQ LHHCSTSD+ILVV LRDNILEEH+LSKL
Subjt:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTSTNLRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDMILVVRLRDNILEEHFLSKL

Query:  HFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHIST-HSELLSPNRPSDSLSEELSN
        HFSWPQVSC+SGFPARGTRTIFGSYRDS DE    IQKFALRFSTS ETD+FVNIIK M + ASDIQPISC+FES IST HSELLSPNRPSDSLSEELSN
Subjt:  HFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHIST-HSELLSPNRPSDSLSEELSN

Query:  STVLQPYTPEMPLSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ
        STVLQPYTPEMPLSLRDT ETYS SQENNAHFDH DSIFAALPPSFTSMLSN SDVK+DQTAT++SAAKDVDLKSQIM+CM DSSFQ
Subjt:  STVLQPYTPEMPLSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ

TrEMBL top hitse value%identityAlignment
A0A2I4DDJ4 protein POOR HOMOLOGOUS SYNAPSIS 15.8e-6349.47Show/hide
Query:  EQAEMSFGAIRDQWEIQFSRFVWHPSSSSTSTNLRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDMILVVRLRDNILEEHFLSKLHFSWPQVSCVS
        E A+    A+ DQWEIQF+RF  +P  SS+  +  PLL   R R P GTWISSSS+ FL+L++  S SD+IL V LR  ILE+H++SKLHFSWP VSCVS
Subjt:  EQAEMSFGAIRDQWEIQFSRFVWHPSSSSTSTNLRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDMILVVRLRDNILEEHFLSKLHFSWPQVSCVS

Query:  GFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSPNRPSDSLSEELSNSTVLQPYTPEMP
        GFPARGTR++F SY D      + IQKFALRFST+ ET+ F+N +K +     DI P++ D  S I + +EL+S NR S+   EELS     Q YTP+M 
Subjt:  GFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSPNRPSDSLSEELSNSTVLQPYTPEMP

Query:  LSLRDTVETYSWSQENNAHFDH-LDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQGTAISTLKL
         S  + +E +S + E +  F H  +   AALPPSFTS+L+NC     +    QS+  K+ DLKSQI+K MEDS+FQ   I+  K+
Subjt:  LSLRDTVETYSWSQENNAHFDH-LDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQGTAISTLKL

A0A6J1BQX6 protein POOR HOMOLOGOUS SYNAPSIS 12.8e-11073.36Show/hide
Query:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTSTN---LRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDMILVVRLRDNILEEHFL
        MAGF+G  +S+E+AEM   AIRDQWE+QFSRF+ +PSS++T+TN   L PL P  RNR PRGTWISSSST  LQLLH CS+ D+IL VR RD ILEEH+L
Subjt:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTSTN---LRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDMILVVRLRDNILEEHFL

Query:  SKLHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSPNRPSDSLSEEL
        SKLHFSWPQVSC+SGFPARGTRTIFGSYRDS +E    IQKFALRFST+ ETD+FVNI+K M+  A DIQPIS +F S I+T SELLS NRPSDSL EEL
Subjt:  SKLHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSPNRPSDSLSEEL

Query:  SNSTVLQPYTPEMPLSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ
        SNS ++QPYTPEMPLSL+DTVETY  SQE  AH DHL+S+FAALPPSFTSMLSNCSDVK+ +TA Q S  KD DLKSQIMKCMEDSSFQ
Subjt:  SNSTVLQPYTPEMPLSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ

A0A6J1GK72 protein POOR HOMOLOGOUS SYNAPSIS 15.7e-11173Show/hide
Query:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTS--------------TNLRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDMILVVR
        MAGFEG  QSKE+ EM F AIRDQWE+QFSRFV +PS++STS              TNLRPLL  AR+R PRGTWISSSST  LQLLHHCS SD+IL VR
Subjt:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTS--------------TNLRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDMILVVR

Query:  LRDNILEEHFLSKLHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSP
         RD ILEEH+LSKLHFSWPQ+ C+SGFP RGTRTIFGSYRDS DE    IQKFALRFSTS E D+FV+I+K MS+ A DIQPISCDF S IS+     + 
Subjt:  LRDNILEEHFLSKLHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSP

Query:  NRPSDSLSEELSNSTVLQPYTPEMPLSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ
        NRPSDSLSEELSNSTVLQPYTPEMPLSL+DT E YS SQE N H DHL+SIFAALPPSFTSM+SNCSDVK+  TAT  SA KD DLKSQIMKCMEDSSFQ
Subjt:  NRPSDSLSEELSNSTVLQPYTPEMPLSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ

A0A6J1KPK1 protein POOR HOMOLOGOUS SYNAPSIS 14.4e-11174.74Show/hide
Query:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTS------TNLRPLLPYARNRL-PRGTWISSSSTVFLQLLHHCSTSDMILVVRLRDNILE
        MAGFEG  QSKE+AEM F AIRDQWE+QFSRFV +P+++STS      TNLRPLL  AR+R  PRGTWISSSST  LQLLHHCS SD IL VR RD ILE
Subjt:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTS------TNLRPLLPYARNRL-PRGTWISSSSTVFLQLLHHCSTSDMILVVRLRDNILE

Query:  EHFLSKLHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSPNRPSDSL
        EH+LSKLHFSWPQ+ C+SGFPARGTRT+FGSYRDS DE    IQKFALRFSTS E D+FV+I+K MS+ A DIQPISCDF S IS+     + NRPSDSL
Subjt:  EHFLSKLHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSPNRPSDSL

Query:  SEELSNSTVLQPYTPEMPLSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ
        SEELSNSTVLQPYTPEMPLSL+DT E YS SQE N H DHL+SIFAALPPSFTSM+SNCSDVK+  TAT  SA KD DLKSQIMKCMEDSSFQ
Subjt:  SEELSNSTVLQPYTPEMPLSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ

A0A7N2L9L7 Uncharacterized protein2.9e-6250.18Show/hide
Query:  QWEIQFSRFVWHPSSSSTSTNLRPLLPYARNRLPRGTWISSS-------STVFLQLLHHCSTSDMILVVRLRDNILEEHFLSKLHFSWPQVSCVSGFPAR
        QWEIQFSRF  +P  SSTS +L PL P  RNR P+GTWISSS       S+ FL+LL+  S SD IL V  R  ILE+H++SKLHFSWPQVSCV+GFPAR
Subjt:  QWEIQFSRFVWHPSSSSTSTNLRPLLPYARNRLPRGTWISSS-------STVFLQLLHHCSTSDMILVVRLRDNILEEHFLSKLHFSWPQVSCVSGFPAR

Query:  GTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSPNRPSDSLSEELSNSTVLQPYTPEMPLSLRD
        G R +F SYRD        IQKFALRFST  E D F+N +K + +   DI P++ D+ S I + SE +S N   D   E L+  T  + YTP+M  SL++
Subjt:  GTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSPNRPSDSLSEELSNSTVLQPYTPEMPLSLRD

Query:  TVETYSWSQENNAHFDH-LDSIFAALPPSFTSMLSN-CSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQGTAISTLKLNLQI
         VE +S +QE    F H  + I A+LPPSFT++L+N C++V +   + QS+  ++VDLKSQI++ MEDSSFQ   I   K+  +I
Subjt:  TVETYSWSQENNAHFDH-LDSIFAALPPSFTSMLSN-CSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQGTAISTLKLNLQI

SwissProt top hitse value%identityAlignment
Q45GQ7 Protein POOR HOMOLOGOUS SYNAPSIS 15.8e-3637.46Show/hide
Query:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTSTNLRPLLPYARNRLPRGTWIS-SSSTVFLQLLHHCSTSDMILVVRLRDNILEEHFLSK
        MAG    +  +  AE S    R  W I F+RFV +PSS S    L+PL    +   P GTW+S SSSTV L ++   + SD+IL V+L   +LEEH++SK
Subjt:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTSTNLRPLLPYARNRLPRGTWIS-SSSTVFLQLLHHCSTSDMILVVRLRDNILEEHFLSK

Query:  LHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNI----IKGMSRKASDIQ--PISCD--FESHISTHSELL------S
        L+F+WPQ+SCVSGFP+RG+R IF +Y DS ++    IQKFALRFST +    FV      IKG+   ++  Q     CD  F+S  +    ++       
Subjt:  LHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNI----IKGMSRKASDIQ--PISCD--FESHISTHSELL------S

Query:  PN--RPSDSL----------------SEELSNSTVLQPYTPEMPLSLRDTVE-------------------TYSWSQENNAHFDHLDSIFAALPPSFTSM
        PN  RP +S                 SE  S  +    Y P + +  R T E                    Y   Q        L+ I  +LPPSFT++
Subjt:  PN--RPSDSL----------------SEELSNSTVLQPYTPEMPLSLRDTVE-------------------TYSWSQENNAHFDHLDSIFAALPPSFTSM

Query:  LSNC-SDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ
        LS C  D   D  A Q++  ++ DLKSQI+K MEDSSFQ
Subjt:  LSNC-SDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ

Q6W2J0 Protein POOR HOMOLOGOUS SYNAPSIS 11.7e-1929.75Show/hide
Query:  QWEIQFSRFVWHPSSSSTS---TNLRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDM-ILVVRLRDNILEEHFLSKLHFSWPQVSCVSGFPARGTR
        +WE++++R+   P    T+   + LR ++        +GTWI +S    L + H    S + +L + + D + EEHF+S L+FSWPQV+CV+  P RG+R
Subjt:  QWEIQFSRFVWHPSSSSTS---TNLRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDM-ILVVRLRDNILEEHFLSKLHFSWPQVSCVSGFPARGTR

Query:  TIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGM--SRKASDIQPISCDFESHISTHSELLSPN------RPSDSLSEELSNSTVLQPYTPEMP
         +F S+ D      + IQKFA+RF    + ++F++ ++    S    DI P   D+    S+ SE +  N        + +L E+  + T+ +P      
Subjt:  TIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGM--SRKASDIQPISCDFESHISTHSELLSPN------RPSDSLSEELSNSTVLQPYTPEMP

Query:  LSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCS
         + +  +E  S S  +N          +A PPSF  ML +CS
Subjt:  LSLRDTVETYSWSQENNAHFDHLDSIFAALPPSFTSMLSNCS

Arabidopsis top hitse value%identityAlignment
AT1G10710.1 poor homologous synapsis 14.1e-3737.46Show/hide
Query:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTSTNLRPLLPYARNRLPRGTWIS-SSSTVFLQLLHHCSTSDMILVVRLRDNILEEHFLSK
        MAG    +  +  AE S    R  W I F+RFV +PSS S    L+PL    +   P GTW+S SSSTV L ++   + SD+IL V+L   +LEEH++SK
Subjt:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTSTNLRPLLPYARNRLPRGTWIS-SSSTVFLQLLHHCSTSDMILVVRLRDNILEEHFLSK

Query:  LHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNI----IKGMSRKASDIQ--PISCD--FESHISTHSELL------S
        L+F+WPQ+SCVSGFP+RG+R IF +Y DS ++    IQKFALRFST +    FV      IKG+   ++  Q     CD  F+S  +    ++       
Subjt:  LHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNI----IKGMSRKASDIQ--PISCD--FESHISTHSELL------S

Query:  PN--RPSDSL----------------SEELSNSTVLQPYTPEMPLSLRDTVE-------------------TYSWSQENNAHFDHLDSIFAALPPSFTSM
        PN  RP +S                 SE  S  +    Y P + +  R T E                    Y   Q        L+ I  +LPPSFT++
Subjt:  PN--RPSDSL----------------SEELSNSTVLQPYTPEMPLSLRDTVE-------------------TYSWSQENNAHFDHLDSIFAALPPSFTSM

Query:  LSNC-SDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ
        LS C  D   D  A Q++  ++ DLKSQI+K MEDSSFQ
Subjt:  LSNC-SDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ

AT1G10710.2 poor homologous synapsis 14.1e-3737.46Show/hide
Query:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTSTNLRPLLPYARNRLPRGTWIS-SSSTVFLQLLHHCSTSDMILVVRLRDNILEEHFLSK
        MAG    +  +  AE S    R  W I F+RFV +PSS S    L+PL    +   P GTW+S SSSTV L ++   + SD+IL V+L   +LEEH++SK
Subjt:  MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTSTNLRPLLPYARNRLPRGTWIS-SSSTVFLQLLHHCSTSDMILVVRLRDNILEEHFLSK

Query:  LHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNI----IKGMSRKASDIQ--PISCD--FESHISTHSELL------S
        L+F+WPQ+SCVSGFP+RG+R IF +Y DS ++    IQKFALRFST +    FV      IKG+   ++  Q     CD  F+S  +    ++       
Subjt:  LHFSWPQVSCVSGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNI----IKGMSRKASDIQ--PISCD--FESHISTHSELL------S

Query:  PN--RPSDSL----------------SEELSNSTVLQPYTPEMPLSLRDTVE-------------------TYSWSQENNAHFDHLDSIFAALPPSFTSM
        PN  RP +S                 SE  S  +    Y P + +  R T E                    Y   Q        L+ I  +LPPSFT++
Subjt:  PN--RPSDSL----------------SEELSNSTVLQPYTPEMPLSLRDTVE-------------------TYSWSQENNAHFDHLDSIFAALPPSFTSM

Query:  LSNC-SDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ
        LS C  D   D  A Q++  ++ DLKSQI+K MEDSSFQ
Subjt:  LSNC-SDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGATTTGAAGGCACGGCGCAGAGCAAAGAGCAAGCGGAAATGTCATTTGGTGCCATTAGAGACCAGTGGGAAATTCAATTCTCTCGCTTCGTTTGGCATCCAAG
TAGCAGCTCCACCAGCACCAACCTCCGTCCTCTCCTTCCCTATGCCCGAAATCGCCTGCCTCGAGGCACATGGATCTCTTCGTCTTCCACTGTTTTCCTACAACTCCTCC
ACCATTGCTCCACCTCTGACATGATTCTTGTCGTACGCTTACGAGATAACATCCTTGAAGAGCACTTCCTTTCCAAGCTGCATTTCTCATGGCCTCAGGTGTCCTGTGTC
TCTGGTTTCCCAGCCAGAGGCACCAGAACTATTTTTGGAAGTTACAGAGATTCAGTTGACGAGGCAAGTCGTTATATCCAAAAGTTTGCCCTAAGATTTTCAACATCCAA
CGAAACTGATACGTTTGTGAACATTATCAAGGGAATGTCAAGGAAAGCAAGTGATATACAGCCAATAAGCTGCGACTTCGAGTCTCATATTTCAACACACTCTGAGTTAT
TATCGCCAAATAGACCGTCTGATAGCCTTTCTGAAGAATTGAGCAATTCTACCGTCCTCCAGCCTTACACCCCTGAAATGCCTTTGAGCTTACGAGATACTGTAGAGACA
TATTCATGGTCTCAGGAAAATAATGCACATTTTGACCACTTAGATAGCATCTTTGCAGCCTTGCCTCCCAGTTTTACTTCTATGCTATCAAACTGTTCAGATGTCAAAAG
AGATCAAACTGCAACTCAGTCATCTGCTGCAAAGGATGTTGATCTAAAGTCTCAAATCATGAAATGTATGGAGGACTCTTCCTTTCAAGGTACGGCTATATCAACACTTA
AATTAAACTTGCAAATCTTTCCATGGCCTGCACTTTAG
mRNA sequenceShow/hide mRNA sequence
TTGAAGAGCGGGAGAACTAGAAGGATCGCTGAGAGAGGGAAGAATGGCGGGATTTGAAGGCACGGCGCAGAGCAAAGAGCAAGCGGAAATGTCATTTGGTGCCATTAGAG
ACCAGTGGGAAATTCAATTCTCTCGCTTCGTTTGGCATCCAAGTAGCAGCTCCACCAGCACCAACCTCCGTCCTCTCCTTCCCTATGCCCGAAATCGCCTGCCTCGAGGC
ACATGGATCTCTTCGTCTTCCACTGTTTTCCTACAACTCCTCCACCATTGCTCCACCTCTGACATGATTCTTGTCGTACGCTTACGAGATAACATCCTTGAAGAGCACTT
CCTTTCCAAGCTGCATTTCTCATGGCCTCAGGTGTCCTGTGTCTCTGGTTTCCCAGCCAGAGGCACCAGAACTATTTTTGGAAGTTACAGAGATTCAGTTGACGAGGCAA
GTCGTTATATCCAAAAGTTTGCCCTAAGATTTTCAACATCCAACGAAACTGATACGTTTGTGAACATTATCAAGGGAATGTCAAGGAAAGCAAGTGATATACAGCCAATA
AGCTGCGACTTCGAGTCTCATATTTCAACACACTCTGAGTTATTATCGCCAAATAGACCGTCTGATAGCCTTTCTGAAGAATTGAGCAATTCTACCGTCCTCCAGCCTTA
CACCCCTGAAATGCCTTTGAGCTTACGAGATACTGTAGAGACATATTCATGGTCTCAGGAAAATAATGCACATTTTGACCACTTAGATAGCATCTTTGCAGCCTTGCCTC
CCAGTTTTACTTCTATGCTATCAAACTGTTCAGATGTCAAAAGAGATCAAACTGCAACTCAGTCATCTGCTGCAAAGGATGTTGATCTAAAGTCTCAAATCATGAAATGT
ATGGAGGACTCTTCCTTTCAAGGTACGGCTATATCAACACTTAAATTAAACTTGCAAATCTTTCCATGGCCTGCACTTTAG
Protein sequenceShow/hide protein sequence
MAGFEGTAQSKEQAEMSFGAIRDQWEIQFSRFVWHPSSSSTSTNLRPLLPYARNRLPRGTWISSSSTVFLQLLHHCSTSDMILVVRLRDNILEEHFLSKLHFSWPQVSCV
SGFPARGTRTIFGSYRDSVDEASRYIQKFALRFSTSNETDTFVNIIKGMSRKASDIQPISCDFESHISTHSELLSPNRPSDSLSEELSNSTVLQPYTPEMPLSLRDTVET
YSWSQENNAHFDHLDSIFAALPPSFTSMLSNCSDVKRDQTATQSSAAKDVDLKSQIMKCMEDSSFQGTAISTLKLNLQIFPWPAL