; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G016720 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G016720
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA-binding protein 48
Genome locationchr08:24466664..24479522
RNA-Seq ExpressionLsi08G016720
SyntenyLsi08G016720
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR020101 - Cytochrome b-c1 complex subunit 8, plants
IPR036642 - Cytochrome b-c1 complex subunit 8 superfamily
IPR039599 - RNA-binding protein 48


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022961644.1 RNA-binding protein 48 isoform X3 [Cucurbita moschata]1.8e-6566.36Show/hide
Query:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE
        +RYLIVRNVPALGCGD+LLKLFSSYGNLEE                            PM    C        F +   V   L  N    RFAKRKLDE
Subjt:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE

Query:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQFQHV
        FVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLARL+SGRPRGSAV+S T K TNPS SHYTLEQK+SLEKRNYGD AL SNPHVSQITRVSSDQF ++
Subjt:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQFQHV

Query:  LQYGYKEFHPTDCTIALKGQ
        LQYGYKE +PT CTI LKG+
Subjt:  LQYGYKEFHPTDCTIALKGQ

XP_022997623.1 RNA-binding protein 48 isoform X3 [Cucurbita maxima]1.3e-6667.27Show/hide
Query:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE
        +RYLIVRNVPALGCGD+LLKLFSSYGNLEE                            PM    C        F +   V   L  N    RFAKRKLDE
Subjt:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE

Query:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQFQHV
        FVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLARLDSGRPRGSAV+S T K TNPS SHYTLEQKNSLEKRNYGD AL SNPHVSQITRVSSDQF ++
Subjt:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQFQHV

Query:  LQYGYKEFHPTDCTIALKGQ
        LQYGYKE +PT CTI LKG+
Subjt:  LQYGYKEFHPTDCTIALKGQ

XP_038884635.1 RNA-binding protein 48 isoform X1 [Benincasa hispida]9.1e-5768.53Show/hide
Query:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SC-SFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLD
        +RYL+VRNVPALGCGDDLLKLFSSYGNLEE                            PM    C  F  ++F             H   + RFAKRKLD
Subjt:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SC-SFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLD

Query:  EFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQ
        EFVFLGNRLQVSYAPEFESLLDT+EKLEVRRREVLARLDSGRPRGSAVSSTTAK TNPSRSHYTLEQKNSLE RNYGDT LISNPHVSQITRVSSDQ
Subjt:  EFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQ

XP_038884635.1 RNA-binding protein 48 isoform X1 [Benincasa hispida]3.3e-1497.87Show/hide
Query:  KDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
        +DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
Subjt:  KDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI

XP_038884635.1 RNA-binding protein 48 isoform X1 [Benincasa hispida]9.1e-5768.53Show/hide
Query:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SC-SFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLD
        +RYL+VRNVPALGCGDDLLKLFSSYGNLEE                            PM    C  F  ++F             H   + RFAKRKLD
Subjt:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SC-SFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLD

Query:  EFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQ
        EFVFLGNRLQVSYAPEFESLLDT+EKLEVRRREVLARLDSGRPRGSAVSSTTAK TNPSRSHYTLEQKNSLE RNYGDT LISNPHVSQITRVSSDQ
Subjt:  EFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQ

XP_038884636.1 RNA-binding protein 48 isoform X2 [Benincasa hispida]8.5e-6369.38Show/hide
Query:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SC-SFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLD
        +RYL+VRNVPALGCGDDLLKLFSSYGNLEE                            PM    C  F  ++F             H   + RFAKRKLD
Subjt:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SC-SFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLD

Query:  EFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQFQH
        EFVFLGNRLQVSYAPEFESLLDT+EKLEVRRREVLARLDSGRPRGSAVSSTTAK TNPSRSHYTLEQKNSLE RNYGDT LISNPHVSQITRVSSDQF  
Subjt:  EFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQFQH

Query:  VLQYGYKEF
        VLQYGYKEF
Subjt:  VLQYGYKEF

TrEMBL top hitse value%identityAlignment
A0A0A0LQL2 RNA-binding protein 485.7e-5769.39Show/hide
Query:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE
        +RYLIVRNVPALGCGDDL KLFSSYGNLEE                            PM    C        F +   V   L  N    RFAKRKLDE
Subjt:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE

Query:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQ
        FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRG+AVSSTTAKLTN SRSHYTL+QKNSLEKRNYGD ALISNPHVSQITRVSSDQ
Subjt:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQ

A0A0A0LQL2 RNA-binding protein 481.6e-1497.87Show/hide
Query:  KDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
        +DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
Subjt:  KDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI

A0A0A0LQL2 RNA-binding protein 481.1e-5567.35Show/hide
Query:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE
        +RYLIVRNVPALGCGD+LLKLFSSYGNLEE                            PM    C        F +   V   L  N    RFAKRKLDE
Subjt:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE

Query:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQ
        FVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLARLDSGRPRGSAV+S T K TNPS SHYTLEQKNSLEKRNYGD AL SNPHVSQITRVSSDQ
Subjt:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQ

A0A6J1HEN0 RNA-binding protein 488.8e-6666.36Show/hide
Query:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE
        +RYLIVRNVPALGCGD+LLKLFSSYGNLEE                            PM    C        F +   V   L  N    RFAKRKLDE
Subjt:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE

Query:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQFQHV
        FVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLARL+SGRPRGSAV+S T K TNPS SHYTLEQK+SLEKRNYGD AL SNPHVSQITRVSSDQF ++
Subjt:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQFQHV

Query:  LQYGYKEFHPTDCTIALKGQ
        LQYGYKE +PT CTI LKG+
Subjt:  LQYGYKEFHPTDCTIALKGQ

A0A6J1K7Z4 RNA-binding protein 481.1e-5567.35Show/hide
Query:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE
        +RYLIVRNVPALGCGD+LLKLFSSYGNLEE                            PM    C        F +   V   L  N    RFAKRKLDE
Subjt:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE

Query:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQ
        FVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLARLDSGRPRGSAV+S T K TNPS SHYTLEQKNSLEKRNYGD AL SNPHVSQITRVSSDQ
Subjt:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQ

A0A6J1K7Z4 RNA-binding protein 482.5e-1287.23Show/hide
Query:  KDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI
        +DYFASESMNQTVHLVREKLDKIQS SEHL+AGP SK+SR+DNRRRI
Subjt:  KDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI

A0A6J1KEG7 RNA-binding protein 486.1e-6767.27Show/hide
Query:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE
        +RYLIVRNVPALGCGD+LLKLFSSYGNLEE                            PM    C        F +   V   L  N    RFAKRKLDE
Subjt:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE

Query:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQFQHV
        FVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLARLDSGRPRGSAV+S T K TNPS SHYTLEQKNSLEKRNYGD AL SNPHVSQITRVSSDQF ++
Subjt:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQFQHV

Query:  LQYGYKEFHPTDCTIALKGQ
        LQYGYKE +PT CTI LKG+
Subjt:  LQYGYKEFHPTDCTIALKGQ

SwissProt top hitse value%identityAlignment
A4FVJ7 RNA-binding protein 481.1e-0728.87Show/hide
Query:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPGSCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDEF
        +RYL+V+ VPA+G   +L++LF+ YG +EEY                    L  +   P        LI F                 + R AKR  DE 
Subjt:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPGSCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDEF

Query:  VFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSD
         F G +L V YAPE+E++ +TK+KL+ RRR V           +  S   AKL +  ++    E  +S + R      +  NP  ++   V+SD
Subjt:  VFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSD

P46269 Cytochrome b-c1 complex subunit 84.3e-2571.43Show/hide
Query:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDFTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSH
        MGKQPV++KAV+YA+SPFQQKIM GLW D  GKIHHK+SENWISA LL+ P+VGTY+Y Q + E EKL H
Subjt:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDFTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSH

Q5R4U2 RNA-binding protein 483.1e-0730.83Show/hide
Query:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPGSCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDEF
        ++YL+++ VPA+G   +L++ F+ YG +E+Y           N ++            P        LI F              N  + R AKRK+DE 
Subjt:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPGSCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDEF

Query:  VFLGNRLQVSYAPEFESLLDTKEKLEVRRREVL
         F G  L V YAPEFE++ +T++KL+VR+  V+
Subjt:  VFLGNRLQVSYAPEFESLLDTKEKLEVRRREVL

Q9FLB7 Cytochrome b-c1 complex subunit 8-2, mitochondrial2.3e-2675.71Show/hide
Query:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDFTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSH
        MGKQPV++KAV+YALSPFQQKIMTGLW D   KIHHK+SENWIS  LL+ PVVGTY+YAQ +KE EKL H
Subjt:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDFTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSH

Q9SG91 Cytochrome b-c1 complex subunit 8-1, mitochondrial3.5e-2778.57Show/hide
Query:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDFTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSH
        MGKQPV++KAV+YALSPFQQKIMTGLW D   KIHHK+SENWISA LL+TPVVGTY YAQ +KE EKL H
Subjt:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDFTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSH

Arabidopsis top hitse value%identityAlignment
AT2G27790.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-2339.39Show/hide
Query:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE
        +RY+IVRNVPALGCGDDL++LF +YG +EE                            PM    C+     +  K  +I            RFAKRKLDE
Subjt:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE

Query:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNP--SRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQ
          FLGNRLQ+SYAPE+E++ DTK+KLE RR+EVLARL+   P+    +S   KL  P  +++     Q+  +E + +   A         +TRVSSDQ
Subjt:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNP--SRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQ

AT2G27790.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-0354.05Show/hide
Query:  KDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASK
        ++YFAS SMNQTV  VREKL+KI+ S    +  P+S+
Subjt:  KDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASK

AT2G27790.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-2339.39Show/hide
Query:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE
        +RY+IVRNVPALGCGDDL++LF +YG +EE                            PM    C+     +  K  +I            RFAKRKLDE
Subjt:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE

Query:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNP--SRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQ
          FLGNRLQ+SYAPE+E++ DTK+KLE RR+EVLARL+   P+    +S   KL  P  +++     Q+  +E + +   A         +TRVSSDQ
Subjt:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNP--SRSHYTLEQKNSLEKRNYGDTALISNPHVSQITRVSSDQ

AT2G27790.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-0354.05Show/hide
Query:  KDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASK
        ++YFAS SMNQTV  VREKL+KI+ S    +  P+S+
Subjt:  KDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASK

AT3G10860.1 Cytochrome b-c1 complex, subunit 8 protein2.5e-2878.57Show/hide
Query:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDFTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSH
        MGKQPV++KAV+YALSPFQQKIMTGLW D   KIHHK+SENWISA LL+TPVVGTY YAQ +KE EKL H
Subjt:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDFTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSH

AT5G05370.1 Cytochrome b-c1 complex, subunit 8 protein1.6e-2775.71Show/hide
Query:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDFTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSH
        MGKQPV++KAV+YALSPFQQKIMTGLW D   KIHHK+SENWIS  LL+ PVVGTY+YAQ +KE EKL H
Subjt:  MGKQPVRMKAVIYALSPFQQKIMTGLWNDFTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSH

AT5G27300.1 pentatricopeptide (PPR) repeat-containing protein1.1e-2041.77Show/hide
Query:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE
        +RY+IVRNVPALGCGDDL++LF +YG +EE                            PM    C+     +  K  +I                RKLDE
Subjt:  NRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPG-SCSFVLIFFCFKECVIVPLSLNHNNLTFRFAKRKLDE

Query:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPS
          FLGNRLQ+SYAPE+ES+ DTKEKLE RR+EVLARL+   P  +  +S   KL  P+
Subjt:  FVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPS

AT5G27300.1 pentatricopeptide (PPR) repeat-containing protein2.3e-0550.94Show/hide
Query:  KDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPAS------KKSRMDNRRRI
        ++YFAS SMNQ V  VREKL+KI+ S    +  P+S      K++R+DNRRRI
Subjt:  KDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPAS------KKSRMDNRRRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGCAACCGGTTCGGATGAAGGCTGTGATCTACGCTTTATCGCCGTTCCAGCAGAAGATCATGACAGGGTTATGGAACGACTTTACCGGCAAGATTCACCATAA
GATCTCCGAGAACTGGATCAGCGCCGCCCTTCTAATTACCCCCGTCGTCGGCACCTACACGTACGCACAGCAGTACAAGGAGAATGAAAAGTTGTCTCACAGCTCTGGTT
TCTTAGACTATGAGGTCATTAACTTCATCCTCTTGATTGTTTTCCCAATTCAAAGACGAGTAGTTCGGGGATGCCTCGCTTTACAGACGACCCCCCTGCGGTTCGCGTCT
ATACGGTTTGCGATGAGTCGAGGTTCACTCCGCCTCTGTAATTTCTCCCCCGCTGAATCAAAGATCTATGCGGCTTATATTACATTGTTCATTGTGAAATTCAACAGGTA
TTTGATTGTGAGGAACGTCCCAGCATTGGGTTGTGGAGATGACTTGCTCAAATTGTTCTCCTCCTACGGAAACCTTGAAGAGTATTTCACTTCTCGTGTAAACCGATGGA
TGCAGAAGAATGTGATGAATTCACAGACGTTTATTTTGTCAAATTTCATTTGGTCACCAATGCCAGGTAGTTGCAGCTTTGTTCTGATTTTCTTTTGTTTTAAAGAATGC
GTTATTGTTCCCCTGAGTTTGAACCATAACAATTTAACTTTTAGGTTTGCAAAAAGGAAATTGGATGAGTTTGTTTTCCTTGGTAATCGGCTGCAAGTCTCTTATGCGCC
TGAGTTTGAAAGCTTGCTTGATACAAAGGAAAAGCTAGAAGTTAGGAGACGAGAAGTGTTAGCACGATTGGATTCTGGAAGACCAAGAGGATCTGCAGTTAGTTCAACAA
CCGCAAAGCTTACAAATCCTTCTCGTTCTCATTATACTCTTGAACAGAAGAACTCTCTTGAAAAGAGGAATTATGGAGACACAGCACTCATTTCCAATCCACATGTTTCT
CAAATAACAAGAGTTTCCTCCGACCAGTTCCAGCATGTGCTGCAATATGGGTACAAGGAGTTCCATCCAACAGATTGCACGATTGCTTTGAAAGGCCAATGCAATGTGAT
AGGTTGCAAGCACAAAATTAGGAAGTTAGATCTCTTTATTTGTTATGTCAAATTTGCTCCTCCTCAAAATTCACAGTCGGAGGTATTCATCAATGTAATGATGCCTTGCA
TCTTAAACAGAGAGAGAGAGAATAGTAATCAGGTTCACCTTCATATAGTAATTATGACAGAAACGGAGGAAATAAGTCCTTGCCATTCGTTGTTGTCAGACTTCTTTATT
GTTAGTCGAACTTTATTTTCTTTTGCCCCTTCCCTTGGAGTCAGGGATTTGGTGATATCAAATTGTGCCATGAGATTAGTGGGGTGCATAGCATACATGCATGCATATGT
ACACACACATTTACACATACATGAAGCAAAACCTTGGTGTGGATCAATGGTGCAACTGAATCGTGTGGAGAAAAGAATCTTTTTGGTGACAGGTGAACAAGCCAAAGATG
GAGGACCTTGTGGCTTGGTTCTCGATTTTCTTCCTTCGGTTTTTGAAAAGTACATTCCTTCTTCAGGAAGTTTTATTTCCCTTTTGTTAGCTGTAGAGCTGCGAAGTCTT
TGGTTATCTTTAGTGAATTTTGTTTGTCCTATTGATTTTTTAGATGATGTACATGTCTTAATGATGTTGGTTGGCCCATTGTCACTAGGTTGGGTCAAGGATTACTTCGC
ATCTGAATCTATGAATCAAACTGTGCATCTCGTCAGGGAAAAGCTTGATAAGATTCAATCAAGCAGCGAACATCTGCAAGCTGGACCCGCGAGCAAGAAGTCACGTATGG
ACAATAGGAGAAGAATCTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAGTTTTTATATTTTCTTGAAGAAAAAAAATATACGTTTTTAATTTTGATTGATTCATACAATTTTCTCAAAACGTGATTTTTCTTTTTTAAAAAAAGAAAAAGAA
AATCGCATCAGACGGGATACAATTTGTCAAGCGTCCGATGGGGTGAAAATCCAACGGTGAGTGTTAGTATTGAAATACGCAGTTAGTAAAAGAGCCTAGCTTAGATTTGG
GAACAGGAGCCAACCCCTTTCGATCGAGAAGCCGCCATCTTCATCATATTCACCTGAGGCATTCGATAGCCGCGTTTTGAAAAATAATTAGGATTGCCATGGGGAAGCAA
CCGGTTCGGATGAAGGCTGTGATCTACGCTTTATCGCCGTTCCAGCAGAAGATCATGACAGGGTTATGGAACGACTTTACCGGCAAGATTCACCATAAGATCTCCGAGAA
CTGGATCAGCGCCGCCCTTCTAATTACCCCCGTCGTCGGCACCTACACGTACGCACAGCAGTACAAGGAGAATGAAAAGTTGTCTCACAGCTCTGGTTTCTTAGACTATG
AGGTCATTAACTTCATCCTCTTGATTGTTTTCCCAATTCAAAGACGAGTAGTTCGGGGATGCCTCGCTTTACAGACGACCCCCCTGCGGTTCGCGTCTATACGGTTTGCG
ATGAGTCGAGGTTCACTCCGCCTCTGTAATTTCTCCCCCGCTGAATCAAAGATCTATGCGGCTTATATTACATTGTTCATTGTGAAATTCAACAGGTATTTGATTGTGAG
GAACGTCCCAGCATTGGGTTGTGGAGATGACTTGCTCAAATTGTTCTCCTCCTACGGAAACCTTGAAGAGTATTTCACTTCTCGTGTAAACCGATGGATGCAGAAGAATG
TGATGAATTCACAGACGTTTATTTTGTCAAATTTCATTTGGTCACCAATGCCAGGTAGTTGCAGCTTTGTTCTGATTTTCTTTTGTTTTAAAGAATGCGTTATTGTTCCC
CTGAGTTTGAACCATAACAATTTAACTTTTAGGTTTGCAAAAAGGAAATTGGATGAGTTTGTTTTCCTTGGTAATCGGCTGCAAGTCTCTTATGCGCCTGAGTTTGAAAG
CTTGCTTGATACAAAGGAAAAGCTAGAAGTTAGGAGACGAGAAGTGTTAGCACGATTGGATTCTGGAAGACCAAGAGGATCTGCAGTTAGTTCAACAACCGCAAAGCTTA
CAAATCCTTCTCGTTCTCATTATACTCTTGAACAGAAGAACTCTCTTGAAAAGAGGAATTATGGAGACACAGCACTCATTTCCAATCCACATGTTTCTCAAATAACAAGA
GTTTCCTCCGACCAGTTCCAGCATGTGCTGCAATATGGGTACAAGGAGTTCCATCCAACAGATTGCACGATTGCTTTGAAAGGCCAATGCAATGTGATAGGTTGCAAGCA
CAAAATTAGGAAGTTAGATCTCTTTATTTGTTATGTCAAATTTGCTCCTCCTCAAAATTCACAGTCGGAGGTATTCATCAATGTAATGATGCCTTGCATCTTAAACAGAG
AGAGAGAGAATAGTAATCAGGTTCACCTTCATATAGTAATTATGACAGAAACGGAGGAAATAAGTCCTTGCCATTCGTTGTTGTCAGACTTCTTTATTGTTAGTCGAACT
TTATTTTCTTTTGCCCCTTCCCTTGGAGTCAGGGATTTGGTGATATCAAATTGTGCCATGAGATTAGTGGGGTGCATAGCATACATGCATGCATATGTACACACACATTT
ACACATACATGAAGCAAAACCTTGGTGTGGATCAATGGTGCAACTGAATCGTGTGGAGAAAAGAATCTTTTTGGTGACAGGTGAACAAGCCAAAGATGGAGGACCTTGTG
GCTTGGTTCTCGATTTTCTTCCTTCGGTTTTTGAAAAGTACATTCCTTCTTCAGGAAGTTTTATTTCCCTTTTGTTAGCTGTAGAGCTGCGAAGTCTTTGGTTATCTTTA
GTGAATTTTGTTTGTCCTATTGATTTTTTAGATGATGTACATGTCTTAATGATGTTGGTTGGCCCATTGTCACTAGGTTGGGTCAAGGATTACTTCGCATCTGAATCTAT
GAATCAAACTGTGCATCTCGTCAGGGAAAAGCTTGATAAGATTCAATCAAGCAGCGAACATCTGCAAGCTGGACCCGCGAGCAAGAAGTCACGTATGGACAATAGGAGAA
GAATCTAATGCTTGCCGACCTTTATAGAGACGGTTAATAGGTGTCTCAACGTTGTATCAAAAGCTATTTTGACACATCGCATATACGCAGATTTGCAGTGTACATATTGA
ATTGTTTGATGTTTTATTTCAAAGGTGTAAATGGAATAGTGCATGCACCAAAGTTCTTTATTGTCATCACTATTAAGTTGCGCTATCATCATTTCTTATCTCACATGAGG
ATCATGATTGTAGATTTATGGTTTACATTTGCAATTTCTTCTTTTTTGCCATGGTTAACGATAATATTATATTAGGTATTAAACCAAAA
Protein sequenceShow/hide protein sequence
MGKQPVRMKAVIYALSPFQQKIMTGLWNDFTGKIHHKISENWISAALLITPVVGTYTYAQQYKENEKLSHSSGFLDYEVINFILLIVFPIQRRVVRGCLALQTTPLRFAS
IRFAMSRGSLRLCNFSPAESKIYAAYITLFIVKFNRYLIVRNVPALGCGDDLLKLFSSYGNLEEYFTSRVNRWMQKNVMNSQTFILSNFIWSPMPGSCSFVLIFFCFKEC
VIVPLSLNHNNLTFRFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLEQKNSLEKRNYGDTALISNPHVS
QITRVSSDQFQHVLQYGYKEFHPTDCTIALKGQCNVIGCKHKIRKLDLFICYVKFAPPQNSQSEVFINVMMPCILNRERENSNQVHLHIVIMTETEEISPCHSLLSDFFI
VSRTLFSFAPSLGVRDLVISNCAMRLVGCIAYMHAYVHTHLHIHEAKPWCGSMVQLNRVEKRIFLVTGEQAKDGGPCGLVLDFLPSVFEKYIPSSGSFISLLLAVELRSL
WLSLVNFVCPIDFLDDVHVLMMLVGPLSLGWVKDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI