; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G016770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G016770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiontype 2 DNA topoisomerase 6 subunit B-like isoform X4
Genome locationchr08:24522669..24527888
RNA-Seq ExpressionLsi08G016770
SyntenyLsi08G016770
Gene Ontology termsGO:0042138 - meiotic DNA double-strand break formation (biological process)
GO:0016853 - isomerase activity (molecular function)
InterPro domainsIPR034566 - Type 2 DNA topoisomerase 6 subunit B-like, plants


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029197.1 Type 2 DNA topoisomerase 6 subunit B-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]9.3e-16572.46Show/hide
Query:  LHALSSSATLSRFRSST--------CLYFYFRYRPWKLHTGVSGIEVPRWRYPCRNVGPVEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS
        L  LSSSATLSRFRSST        C+  +       L   V GI    W      V   +IADI D EISCY+LNLKENV+TRKPI  PSN KH V  S
Subjt:  LHALSSSATLSRFRSST--------CLYFYFRYRPWKLHTGVSGIEVPRWRYPCRNVGPVEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS

Query:  TKETHKLFA------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVC
          E+  +        F K       NIAMEV+ADGQ +PGS NDAVF +  S SSSF ASTLDHLKLGLE YVL+HGSSL CDSCFPNRD+LRSGGGMVC
Subjt:  TKETHKLFA------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVC

Query:  EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK
        EDKHKTTKLVVEAAVV SE SNP+NNCFGAGCSDT+VLCFKDFAPCSISEA L+ALT IDWKRYGL LECAI+QRSHALLKWEH PLSFHIH+VVHCY K
Subjt:  EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK

Query:  A--EATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISA
           EA PL+Q+TRFDKKLIRKAVKLALDDFKNK+AG LLSADTLKIS+FAPDLAK IAGLV YS DMDFK+ECLAILGLQPH SEGEIV E IKKKIISA
Subjt:  A--EATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISA

Query:  IEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        IE NDRR QG KEVAPLLFE GRH+LQFVDDEC + GFD MDL
Subjt:  IEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

XP_023545219.1 type 2 DNA topoisomerase 6 subunit B-like [Cucurbita pepo subsp. pepo]7.9e-16467.44Show/hide
Query:  MEFASLQDLYLHALSSSATLSRFRSSTCLYFYFRYRP------------------------WKLHTGVSGIEVPRWRYPCRNVGPVEIADIFDTEISCYQ
        MEFASLQDL L  +SS+          C       R                           L   V GI    W      +  V   +I D EISCY+
Subjt:  MEFASLQDLYLHALSSSATLSRFRSSTCLYFYFRYRP------------------------WKLHTGVSGIEVPRWRYPCRNVGPVEIADIFDTEISCYQ

Query:  LNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTLDHLKL
        LNLKENV+TRKPI  PSN KHGVKFS  E                     K+      NIAMEV+ADGQ +PGS NDAVF E +S+SSSF ASTLDHLKL
Subjt:  LNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTLDHLKL

Query:  GLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWKRYGLT
        GLE YVL+HGSSL CDSCFPNRD+LRSGGGMVCEDKHKTTKLVVEAAVV SEISNPTNNCFGAGCSDT+VLCFKDFAPCSISEA L+ALT IDWKRYGL 
Subjt:  GLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWKRYGLT

Query:  LECAINQRSHALLKWEHTPLSFHIHVVVHCYHKA--EATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVSYSHDM
        LECAI+QRSHALLKWEH PLSFHIH+VVHCY K   EA PL+Q+TRFDKKLIRKAVKLALDDFKNK+AG LLSADTLKIS+FAPDLAK IAGLV YS DM
Subjt:  LECAINQRSHALLKWEHTPLSFHIHVVVHCYHKA--EATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVSYSHDM

Query:  DFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        DFK+ECLAILGLQPH SEGEIV E IKKKIISAIE NDRR QG KEVAPLLFE GRH+LQFVDDEC + GFD MDL
Subjt:  DFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

XP_038885430.1 type 2 DNA topoisomerase 6 subunit B-like isoform X1 [Benincasa hispida]1.4e-17369.65Show/hide
Query:  MEFASLQDLYLHALSS--------------SATLSRFRSS---------------TCLYFYFRYRPWKLHTGVSGIEVPRWRYPCRNVGPVEIADIFDTE
        MEFASLQ+LYLH +SS              S  L R  +S               +C+  +       L   V GI    W      V   EI DI DTE
Subjt:  MEFASLQDLYLHALSS--------------SATLSRFRSS---------------TCLYFYFRYRPWKLHTGVSGIEVPRWRYPCRNVGPVEIADIFDTE

Query:  ISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTL
        ISCYQLNLKENV+TRKPIW PSN KHGVKFS  E                    H++   +  NIAMEVVADGQ IPGS NDAVF ENLSSSSSFTASTL
Subjt:  ISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTL

Query:  DHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWK
        DHLKLGLEDYVL+HGSS TCDSCFPNRDDLRSGGGMVCE+KHK TKLVVEAAVVISEISNPTNNCFG GCSDT+VLCFKDF PCSI+EAFL+ALT IDWK
Subjt:  DHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWK

Query:  RYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVS
        RYGLTLECAINQ SHALLKW   P SFHIH+VVHCYHK  AEATP+VQQTR+DKKLIRKAV+LALDDFKNKY GFLLSADTLKIS+FAPDLAK +AGLV 
Subjt:  RYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVS

Query:  YSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        YS+DMDFK ECL+ILGLQ H SEG IVEETIKK IISAIEGNDRRPQ +KEVAPLLFEDGR    FVDDECYK GFD MDL
Subjt:  YSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

XP_038885431.1 type 2 DNA topoisomerase 6 subunit B-like isoform X2 [Benincasa hispida]4.2e-17369.23Show/hide
Query:  MEFASLQDLYLHALSS--------------SATLSRFRSS---------------TCLYFYFRYRPWKLHTGVSGIEVPRWRYPCRNVGPVEIADIFDTE
        MEFASLQ+LYLH +SS              S  L R  +S               +C+  +       L   V GI    W      +  V+  DI DTE
Subjt:  MEFASLQDLYLHALSS--------------SATLSRFRSS---------------TCLYFYFRYRPWKLHTGVSGIEVPRWRYPCRNVGPVEIADIFDTE

Query:  ISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTL
        ISCYQLNLKENV+TRKPIW PSN KHGVKFS  E                    H++   +  NIAMEVVADGQ IPGS NDAVF ENLSSSSSFTASTL
Subjt:  ISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTL

Query:  DHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWK
        DHLKLGLEDYVL+HGSS TCDSCFPNRDDLRSGGGMVCE+KHK TKLVVEAAVVISEISNPTNNCFG GCSDT+VLCFKDF PCSI+EAFL+ALT IDWK
Subjt:  DHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWK

Query:  RYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVS
        RYGLTLECAINQ SHALLKW   P SFHIH+VVHCYHK  AEATP+VQQTR+DKKLIRKAV+LALDDFKNKY GFLLSADTLKIS+FAPDLAK +AGLV 
Subjt:  RYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVS

Query:  YSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        YS+DMDFK ECL+ILGLQ H SEG IVEETIKK IISAIEGNDRRPQ +KEVAPLLFEDGR    FVDDECYK GFD MDL
Subjt:  YSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

XP_038885432.1 type 2 DNA topoisomerase 6 subunit B-like isoform X3 [Benincasa hispida]1.5e-17571.1Show/hide
Query:  MEFASLQDLYLHALSS--------------SATLSRFRSS---------------TCLYFYFRYRPWKLHTGVSGIEVPRWRYPCRNVGPVEIADIFDTE
        MEFASLQ+LYLH +SS              S  L R  +S               +C+  +       L   V GI    W      V   EI DI DTE
Subjt:  MEFASLQDLYLHALSS--------------SATLSRFRSS---------------TCLYFYFRYRPWKLHTGVSGIEVPRWRYPCRNVGPVEIADIFDTE

Query:  ISCYQLNLKENVSTRKPIWQPSNSKHGVKFS--------TKETHKLFA-----FHKNIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTLDHLKLGL
        ISCYQLNLKENV+TRKPIW PSN KHGVKFS        ++    L A     FH+NIAMEVVADGQ IPGS NDAVF ENLSSSSSFTASTLDHLKLGL
Subjt:  ISCYQLNLKENVSTRKPIWQPSNSKHGVKFS--------TKETHKLFA-----FHKNIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTLDHLKLGL

Query:  EDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWKRYGLTLE
        EDYVL+HGSS TCDSCFPNRDDLRSGGGMVCE+KHK TKLVVEAAVVISEISNPTNNCFG GCSDT+VLCFKDF PCSI+EAFL+ALT IDWKRYGLTLE
Subjt:  EDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWKRYGLTLE

Query:  CAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVSYSHDMDF
        CAINQ SHALLKW   P SFHIH+VVHCYHK  AEATP+VQQTR+DKKLIRKAV+LALDDFKNKY GFLLSADTLKIS+FAPDLAK +AGLV YS+DMDF
Subjt:  CAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVSYSHDMDF

Query:  KKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        K ECL+ILGLQ H SEG IVEETIKK IISAIEGNDRRPQ +KEVAPLLFEDGR    FVDDECYK GFD MDL
Subjt:  KKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

TrEMBL top hitse value%identityAlignment
A0A1S4DVN5 type 2 DNA topoisomerase 6 subunit B-like isoform X46.7e-16166.32Show/hide
Query:  MEFASLQDLYLHALSS--------------SATLSRFRSS---------------TCLYFYFRYRPWKLHTGVSGIEVPRWRYPCRNVGPVEIADIFDTE
        MEFASLQDLYLH +SS              S  L R  +S               +C+  +       L   V GI    W      +  V   +I DTE
Subjt:  MEFASLQDLYLHALSS--------------SATLSRFRSS---------------TCLYFYFRYRPWKLHTGVSGIEVPRWRYPCRNVGPVEIADIFDTE

Query:  ISCYQLNLKENVSTRKPIWQPSNSKHGVKFS--------TKETHKLFA-----FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTL
        ISCYQLNLKENV+TRKP+W PSN KH VKFS        ++    L A     FH+       NIAMEVVADGQ   GS NDAVF ENL S SSFTASTL
Subjt:  ISCYQLNLKENVSTRKPIWQPSNSKHGVKFS--------TKETHKLFA-----FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTL

Query:  DHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWK
        D LKLG EDYVL HGSS TC+SCFPNRD+L+SGGGMVCEDKHK TKLVVEAAVVISEISNPT NCFGAGCSDT+VL FKDF PC+ISEAFL+ALT IDWK
Subjt:  DHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWK

Query:  RYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVS
        R+GLTLECAINQR HALLKWE TPLSFHIH+VVH Y K  A ATPLVQQTR DKKLI KAV+LAL+DFKNK+AGFLLS D LKISRFAPDLAK IAGLV 
Subjt:  RYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVS

Query:  YSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        YS+DMDFK+ECLAILGLQPH SEGE+VEETIKKKIIS IE ND+RPQGIKEVA LLF  GR KLQ +D+ECY   FD MDL
Subjt:  YSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

A0A6J1HCF2 type 2 DNA topoisomerase 6 subunit B-like isoform X61.6e-16274.08Show/hide
Query:  VSGIEVPRWRYPCRNVGPVEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVAD
        V GI    W      +  V   +I D EISCY+LNLKENV+TRKPI  PSN KHGVKFS  E                     K+      NIAMEV+AD
Subjt:  VSGIEVPRWRYPCRNVGPVEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVAD

Query:  GQYIPGSHNDAVFRENLSSSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSD
        GQ +PGS NDAVF E  S SSSF ASTLDHLKLGLE YVL+HGSSL CDSCFPNRD+LRSGGGMVCEDKHKTTKLVVEAAVV SEI NPTNNCFGAGCSD
Subjt:  GQYIPGSHNDAVFRENLSSSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSD

Query:  TEVLCFKDFAPCSISEAFLEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKA--EATPLVQQTRFDKKLIRKAVKLALDDFKNKY
        T+VLCFKDFAPCSISEA L+ALT IDWKRYGL LECAI+QRSHALLKWEH PLSFHIH+VVHCY K   EA PL+Q+TRFDKKLIRKAVKLALDDFKNK+
Subjt:  TEVLCFKDFAPCSISEAFLEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKA--EATPLVQQTRFDKKLIRKAVKLALDDFKNKY

Query:  AGFLLSADTLKISRFAPDLAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECY
        AG LLSADTLKIS+FAPDLAK IAGLV YS DMDFK+ECLAILGLQPH SEGEIV E IKKKIISAIE NDRR QG +EVAPLLFE GRH+LQ+VDDEC 
Subjt:  AGFLLSADTLKISRFAPDLAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECY

Query:  KGGFDSMDL
        + GFD MDL
Subjt:  KGGFDSMDL

A0A6J1HCT4 type 2 DNA topoisomerase 6 subunit B-like isoform X51.1e-15870.3Show/hide
Query:  VSGIEVPRWRYPCRNVGPVEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVAD
        V GI    W      +  V   +I D EISCY+LNLKENV+TRKPI  PSN KHGVKFS  E                     K+      NIAMEV+AD
Subjt:  VSGIEVPRWRYPCRNVGPVEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVAD

Query:  GQYIPGSHNDAVFRENLSSSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSD
        GQ +PGS NDAVF E  S SSSF ASTLDHLKLGLE YVL+HGSSL CDSCFPNRD+LRSGGGMVCEDKHKTTKLVVEAAVV SEI NPTNNCFGAGCSD
Subjt:  GQYIPGSHNDAVFRENLSSSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSD

Query:  TEVLCFKDFAPCSISEAFLEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKA--EATPLVQQTRFDKKLIRKAVKLALDDFKNKY
        T+VLCFKDFAPCSISEA L+ALT IDWKRYGL LECAI+QRSHALLKWEH PLSFHIH+VVHCY K   EA PL+Q+TRFDKKLIRKAVKLALDDFKNK+
Subjt:  TEVLCFKDFAPCSISEAFLEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKA--EATPLVQQTRFDKKLIRKAVKLALDDFKNKY

Query:  AGFLLSADTLK----------------------ISRFAPDLAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIK
        AG LLSADTLK                      IS+FAPDLAK IAGLV YS DMDFK+ECLAILGLQPH SEGEIV E IKKKIISAIE NDRR QG +
Subjt:  AGFLLSADTLK----------------------ISRFAPDLAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIK

Query:  EVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        EVAPLLFE GRH+LQ+VDDEC + GFD MDL
Subjt:  EVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

A0A6J1HEH3 type 2 DNA topoisomerase 6 subunit B-like isoform X21.1e-15870.3Show/hide
Query:  VSGIEVPRWRYPCRNVGPVEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVAD
        V GI    W      +  V   +I D EISCY+LNLKENV+TRKPI  PSN KHGVKFS  E                     K+      NIAMEV+AD
Subjt:  VSGIEVPRWRYPCRNVGPVEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVAD

Query:  GQYIPGSHNDAVFRENLSSSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSD
        GQ +PGS NDAVF E  S SSSF ASTLDHLKLGLE YVL+HGSSL CDSCFPNRD+LRSGGGMVCEDKHKTTKLVVEAAVV SEI NPTNNCFGAGCSD
Subjt:  GQYIPGSHNDAVFRENLSSSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSD

Query:  TEVLCFKDFAPCSISEAFLEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKA--EATPLVQQTRFDKKLIRKAVKLALDDFKNKY
        T+VLCFKDFAPCSISEA L+ALT IDWKRYGL LECAI+QRSHALLKWEH PLSFHIH+VVHCY K   EA PL+Q+TRFDKKLIRKAVKLALDDFKNK+
Subjt:  TEVLCFKDFAPCSISEAFLEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKA--EATPLVQQTRFDKKLIRKAVKLALDDFKNKY

Query:  AGFLLSADTLK----------------------ISRFAPDLAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIK
        AG LLSADTLK                      IS+FAPDLAK IAGLV YS DMDFK+ECLAILGLQPH SEGEIV E IKKKIISAIE NDRR QG +
Subjt:  AGFLLSADTLK----------------------ISRFAPDLAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIK

Query:  EVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        EVAPLLFE GRH+LQ+VDDEC + GFD MDL
Subjt:  EVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

A0A6J1K810 type 2 DNA topoisomerase 6 subunit B-like isoform X51.5e-16066.39Show/hide
Query:  MEFASLQDLYLHALSSSATLSRFRSSTCLYFYFRYRP------------------------WKLHTGVSGIEVPRWRYPCRNVGPVEIADIFDTEISCYQ
        MEFASLQDL L  +SS+          C       R                           L   V GI    W      +  V   +I D EISCYQ
Subjt:  MEFASLQDLYLHALSSSATLSRFRSSTCLYFYFRYRP------------------------WKLHTGVSGIEVPRWRYPCRNVGPVEIADIFDTEISCYQ

Query:  LNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTLDHLKL
        LNLKENV+TRKPI  PSN KHGVKFS  E                     K+      NIAMEV+ADGQ +PGS NDAVF E  S SSSF ASTLDHLK 
Subjt:  LNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTLDHLKL

Query:  GLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWKRYGLT
        GLE YVL+HGSSL CDSCFPNRD+LRSGGGMVCEDKHKTTKLVVEAAVV +EISNPTNNCF AGCS+T+VLCFKDFAPCSISEA L+ALT IDWKRYGL 
Subjt:  GLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWKRYGLT

Query:  LECAINQRSHALLKWEHTPLSFHIHVVVHCY--HKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVSYSHDM
        LECAI+QRSHALLKWEH PLSFHIH+VVHCY  H  EA PL+Q+TRFDKKLIRKAVKLALDDFKNK+AG LLSADTLKIS+FAPDLAK IAGLV YS DM
Subjt:  LECAINQRSHALLKWEHTPLSFHIHVVVHCY--HKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVSYSHDM

Query:  DFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        DFK+ECLAILGLQPH SEGEIV E IK KIISAIE NDRR QG KEVAPLLFE GRH+LQFVDDEC + G D MDL
Subjt:  DFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

SwissProt top hitse value%identityAlignment
Q5Q0E6 Type 2 DNA topoisomerase 6 subunit B-like1.3e-6537.92Show/hide
Query:  DTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS-TKETHKLFA------------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTA
        D E+  Y +NL E ++ ++   QPS +K+G KFS T+ +  +F             F K       N+ ++++      PG+    VF  N   +  FTA
Subjt:  DTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS-TKETHKLFA------------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTA

Query:  STLDHLKLGLEDYVLKHGSSL--TCDSCFPNRDDLRSGGGMVC-EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEAL
        S L+ LK GLEDYVL+H + L   CD CF +R+ L+ G G VC EDKHK     +E  +VIS++   T +C  +    TEVL F +F P  +    L AL
Subjt:  STLDHLKLGLEDYVLKHGSSL--TCDSCFPNRDDLRSGGGMVC-EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEAL

Query:  TSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIA
          IDWK+YGL L    +Q  H  L+W++ P    I + +H YH     P  Q+      L++K +K ALD+ K K+ GFLLS+ + KI  + PDLA+ IA
Subjt:  TSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIA

Query:  GLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        GL+  S D+DF+ +CL++LG Q    E + VE  I++KI++ I  N+R+PQ  +E AP LF DG  +  F +DE  +G + S  L
Subjt:  GLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

Arabidopsis top hitse value%identityAlignment
AT1G60460.1 unknown protein1.1e-6538.24Show/hide
Query:  DTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS-TKETHKLFA------------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTA
        D E+  Y +NL E ++ ++   QPS +K+G KFS T+ +  +F             F K       N+ ++++      PG+    VF  N   +  FTA
Subjt:  DTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS-TKETHKLFA------------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTA

Query:  STLDHLKLGLEDYVLKHGSSL--TCDSCFPNRDDLRSGGGMVC-EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEAL
        S L+ LK GLEDYVL+H + L   CD CF +R+ L+ G G VC EDKHK     +E  +VIS++   T +C  +    TEVL F +F P  +    L AL
Subjt:  STLDHLKLGLEDYVLKHGSSL--TCDSCFPNRDDLRSGGGMVC-EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEAL

Query:  TSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIA
          IDWK+YGL L    +Q  H  L+W++ P    I + +H YH     P  Q+      L++K +K ALD+ K K+ GFLLS+ + KI  + PDLA+ IA
Subjt:  TSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIA

Query:  GLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDE
        GL+  S D+DF+ +CL++LG Q    E + VE  I++KI++ I  N+R+PQ  +E AP LF DG  +  F +DE
Subjt:  GLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDE

AT1G60460.2 unknown protein9.5e-6737.92Show/hide
Query:  DTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS-TKETHKLFA------------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTA
        D E+  Y +NL E ++ ++   QPS +K+G KFS T+ +  +F             F K       N+ ++++      PG+    VF  N   +  FTA
Subjt:  DTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS-TKETHKLFA------------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTA

Query:  STLDHLKLGLEDYVLKHGSSL--TCDSCFPNRDDLRSGGGMVC-EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEAL
        S L+ LK GLEDYVL+H + L   CD CF +R+ L+ G G VC EDKHK     +E  +VIS++   T +C  +    TEVL F +F P  +    L AL
Subjt:  STLDHLKLGLEDYVLKHGSSL--TCDSCFPNRDDLRSGGGMVC-EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEAL

Query:  TSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIA
          IDWK+YGL L    +Q  H  L+W++ P    I + +H YH     P  Q+      L++K +K ALD+ K K+ GFLLS+ + KI  + PDLA+ IA
Subjt:  TSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIA

Query:  GLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        GL+  S D+DF+ +CL++LG Q    E + VE  I++KI++ I  N+R+PQ  +E AP LF DG  +  F +DE  +G + S  L
Subjt:  GLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

AT1G60460.3 unknown protein9.5e-6737.92Show/hide
Query:  DTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS-TKETHKLFA------------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTA
        D E+  Y +NL E ++ ++   QPS +K+G KFS T+ +  +F             F K       N+ ++++      PG+    VF  N   +  FTA
Subjt:  DTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS-TKETHKLFA------------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTA

Query:  STLDHLKLGLEDYVLKHGSSL--TCDSCFPNRDDLRSGGGMVC-EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEAL
        S L+ LK GLEDYVL+H + L   CD CF +R+ L+ G G VC EDKHK     +E  +VIS++   T +C  +    TEVL F +F P  +    L AL
Subjt:  STLDHLKLGLEDYVLKHGSSL--TCDSCFPNRDDLRSGGGMVC-EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEAL

Query:  TSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIA
          IDWK+YGL L    +Q  H  L+W++ P    I + +H YH     P  Q+      L++K +K ALD+ K K+ GFLLS+ + KI  + PDLA+ IA
Subjt:  TSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIA

Query:  GLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        GL+  S D+DF+ +CL++LG Q    E + VE  I++KI++ I  N+R+PQ  +E AP LF DG  +  F +DE  +G + S  L
Subjt:  GLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTATTTACGGGAGCGCGGGAGTAGTTCTCTCAAAGCTGCAATCATGGAATTTGCTTCTCTTCAAGATCTCTACCTACATGCTCTCAGTTCTTCTGCAACGCTCTC
CCGCTTCCGATCCTCCACTTGTTTGTATTTCTATTTCAGATACCGGCCTTGGAAGCTGCATACAGGAGTTTCAGGAATTGAAGTGCCCCGTTGGAGGTATCCTTGCCGAA
ACGTGGGCCCTGTGGAGATTGCAGATATTTTTGATACTGAGATAAGTTGCTATCAGTTGAATCTGAAAGAGAATGTCAGTACCAGGAAGCCAATTTGGCAACCTTCAAAC
AGTAAGCATGGTGTGAAATTCAGCACGAAAGAAACTCATAAGCTTTTTGCATTTCACAAGAATATTGCAATGGAAGTTGTGGCCGACGGCCAGTATATCCCAGGGTCACA
TAATGATGCTGTTTTCCGGGAAAACTTGTCCTCTAGTTCCTCTTTTACAGCCTCAACCCTTGATCATTTGAAATTGGGCCTTGAGGATTATGTATTAAAGCATGGATCTA
GTTTGACGTGTGACTCTTGTTTCCCTAACAGGGATGATCTGAGGAGTGGGGGTGGAATGGTTTGTGAAGACAAGCATAAAACTACCAAACTGGTAGTGGAGGCAGCGGTT
GTGATTAGTGAAATATCAAATCCGACCAATAATTGCTTTGGAGCAGGATGCTCTGATACAGAGGTTCTCTGTTTTAAAGATTTTGCACCTTGTTCGATCTCTGAGGCATT
TCTAGAGGCATTAACAAGCATTGACTGGAAACGTTATGGTTTGACTTTGGAATGTGCTATCAATCAAAGAAGCCATGCATTACTAAAGTGGGAACACACGCCCTTATCTT
TTCATATTCATGTTGTTGTACACTGCTATCATAAGGCCGAAGCCACGCCACTGGTGCAGCAGACTCGGTTTGATAAAAAACTCATAAGAAAAGCAGTTAAACTTGCACTG
GACGACTTCAAGAATAAATATGCGGGATTTCTTCTCAGTGCCGATACCCTCAAGATCAGTAGGTTTGCCCCTGATCTTGCCAAAGTGATTGCTGGCCTAGTTTCATACTC
CCATGACATGGATTTCAAAAAAGAATGCCTTGCAATTCTTGGCTTGCAACCTCATCTATCAGAAGGTGAAATTGTTGAAGAAACTATAAAGAAAAAGATTATTTCAGCGA
TAGAGGGGAATGATAGAAGGCCACAAGGTATTAAAGAAGTTGCCCCTCTTCTGTTTGAAGATGGTCGCCACAAATTACAGTTTGTGGACGATGAATGTTACAAAGGTGGT
TTTGATTCAATGGATTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTATTTACGGGAGCGCGGGAGTAGTTCTCTCAAAGCTGCAATCATGGAATTTGCTTCTCTTCAAGATCTCTACCTACATGCTCTCAGTTCTTCTGCAACGCTCTC
CCGCTTCCGATCCTCCACTTGTTTGTATTTCTATTTCAGATACCGGCCTTGGAAGCTGCATACAGGAGTTTCAGGAATTGAAGTGCCCCGTTGGAGGTATCCTTGCCGAA
ACGTGGGCCCTGTGGAGATTGCAGATATTTTTGATACTGAGATAAGTTGCTATCAGTTGAATCTGAAAGAGAATGTCAGTACCAGGAAGCCAATTTGGCAACCTTCAAAC
AGTAAGCATGGTGTGAAATTCAGCACGAAAGAAACTCATAAGCTTTTTGCATTTCACAAGAATATTGCAATGGAAGTTGTGGCCGACGGCCAGTATATCCCAGGGTCACA
TAATGATGCTGTTTTCCGGGAAAACTTGTCCTCTAGTTCCTCTTTTACAGCCTCAACCCTTGATCATTTGAAATTGGGCCTTGAGGATTATGTATTAAAGCATGGATCTA
GTTTGACGTGTGACTCTTGTTTCCCTAACAGGGATGATCTGAGGAGTGGGGGTGGAATGGTTTGTGAAGACAAGCATAAAACTACCAAACTGGTAGTGGAGGCAGCGGTT
GTGATTAGTGAAATATCAAATCCGACCAATAATTGCTTTGGAGCAGGATGCTCTGATACAGAGGTTCTCTGTTTTAAAGATTTTGCACCTTGTTCGATCTCTGAGGCATT
TCTAGAGGCATTAACAAGCATTGACTGGAAACGTTATGGTTTGACTTTGGAATGTGCTATCAATCAAAGAAGCCATGCATTACTAAAGTGGGAACACACGCCCTTATCTT
TTCATATTCATGTTGTTGTACACTGCTATCATAAGGCCGAAGCCACGCCACTGGTGCAGCAGACTCGGTTTGATAAAAAACTCATAAGAAAAGCAGTTAAACTTGCACTG
GACGACTTCAAGAATAAATATGCGGGATTTCTTCTCAGTGCCGATACCCTCAAGATCAGTAGGTTTGCCCCTGATCTTGCCAAAGTGATTGCTGGCCTAGTTTCATACTC
CCATGACATGGATTTCAAAAAAGAATGCCTTGCAATTCTTGGCTTGCAACCTCATCTATCAGAAGGTGAAATTGTTGAAGAAACTATAAAGAAAAAGATTATTTCAGCGA
TAGAGGGGAATGATAGAAGGCCACAAGGTATTAAAGAAGTTGCCCCTCTTCTGTTTGAAGATGGTCGCCACAAATTACAGTTTGTGGACGATGAATGTTACAAAGGTGGT
TTTGATTCAATGGATTTGTAAGTTCGTATTGAATAAAAGTGAAACATCATAATTTTGAAGG
Protein sequenceShow/hide protein sequence
MFYLRERGSSSLKAAIMEFASLQDLYLHALSSSATLSRFRSSTCLYFYFRYRPWKLHTGVSGIEVPRWRYPCRNVGPVEIADIFDTEISCYQLNLKENVSTRKPIWQPSN
SKHGVKFSTKETHKLFAFHKNIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAV
VISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLAL
DDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGG
FDSMDL