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Lsi08G016810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G016810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAMSH-like ubiquitin thioesterase 2
Genome locationchr08:24557436..24558338
RNA-Seq ExpressionLsi08G016810
SyntenyLsi08G016810
Gene Ontology termsGO:0070536 - protein K63-linked deubiquitination (biological process)
GO:0008237 - metallopeptidase activity (molecular function)
GO:0061578 - Lys63-specific deubiquitinase activity (molecular function)
GO:0070122 - isopeptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KJB31159.1 hypothetical protein B456_005G182100 [Gossypium raimondii]1.4e-0969.39Show/hide
Query:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRSSPPLTFIPW
        N +KD ETCGVLGA+L+KGTFYVTTLIIPKQE+TSNSV       F+P+
Subjt:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRSSPPLTFIPW

MBA0738757.1 hypothetical protein [Gossypium gossypioides]3.7e-1080.95Show/hide
Query:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRSSP
        N +KD ETCGVLGA+L+KGTFYVTTLIIPKQESTSNSV + P
Subjt:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRSSP

XP_022733827.1 AMSH-like ubiquitin thioesterase 2 isoform X1 [Durio zibethinus]1.4e-0982.5Show/hide
Query:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS
        N EKD ETCGVLGA+L+KGTFYVTTLIIPKQESTSNS ++
Subjt:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS

XP_022733829.1 AMSH-like ubiquitin thioesterase 2 isoform X3 [Durio zibethinus]1.4e-0982.5Show/hide
Query:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS
        N EKD ETCGVLGA+L+KGTFYVTTLIIPKQESTSNS ++
Subjt:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS

XP_022733830.1 AMSH-like ubiquitin thioesterase 2 isoform X4 [Durio zibethinus]1.4e-0982.5Show/hide
Query:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS
        N EKD ETCGVLGA+L+KGTFYVTTLIIPKQESTSNS ++
Subjt:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS

TrEMBL top hitse value%identityAlignment
A0A0D2RH58 Uncharacterized protein6.9e-1069.39Show/hide
Query:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRSSPPLTFIPW
        N +KD ETCGVLGA+L+KGTFYVTTLIIPKQE+TSNSV       F+P+
Subjt:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRSSPPLTFIPW

A0A6P5Y031 AMSH-like ubiquitin thioesterase 2 isoform X36.9e-1082.5Show/hide
Query:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS
        N EKD ETCGVLGA+L+KGTFYVTTLIIPKQESTSNS ++
Subjt:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS

A0A6P5Y046 AMSH-like ubiquitin thioesterase 2 isoform X16.9e-1082.5Show/hide
Query:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS
        N EKD ETCGVLGA+L+KGTFYVTTLIIPKQESTSNS ++
Subjt:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS

A0A6P5Y095 AMSH-like ubiquitin thioesterase 2 isoform X46.9e-1082.5Show/hide
Query:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS
        N EKD ETCGVLGA+L+KGTFYVTTLIIPKQESTSNS ++
Subjt:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS

A0A7J9BRH2 Uncharacterized protein1.8e-1080.95Show/hide
Query:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRSSP
        N +KD ETCGVLGA+L+KGTFYVTTLIIPKQESTSNSV + P
Subjt:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRSSP

SwissProt top hitse value%identityAlignment
Q54Q40 Probable ubiquitin thioesterase DG10399.3e-0444.74Show/hide
Query:  SNPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNS
        +N ++  ETCG+L   L    F +TT+IIPKQE T+++
Subjt:  SNPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNS

Q5PNU3 AMSH-like ubiquitin thioesterase 31.5e-0658.54Show/hide
Query:  SNPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS
        SN E++ ETCGVL   L    F++TTLIIPKQESTS+S ++
Subjt:  SNPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS

Q6NKP9 AMSH-like ubiquitin thioesterase 23.0e-1072.5Show/hide
Query:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS
        N EKD ETCG L A+L++G FYVTTLIIPKQESTSNS ++
Subjt:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS

Q8VYB5 AMSH-like ubiquitin thioesterase 12.6e-0654.76Show/hide
Query:  SNPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRSS
        SN +K+ ETCG+L   L    FY+T LIIPKQESTS+S +++
Subjt:  SNPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRSS

Arabidopsis top hitse value%identityAlignment
AT1G10600.1 associated molecule with the SH3 domain of STAM 22.1e-1172.5Show/hide
Query:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS
        N EKD ETCG L A+L++G FYVTTLIIPKQESTSNS ++
Subjt:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS

AT1G10600.3 associated molecule with the SH3 domain of STAM 22.1e-1172.5Show/hide
Query:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS
        N EKD ETCG L A+L++G FYVTTLIIPKQESTSNS ++
Subjt:  NPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS

AT1G48790.1 associated molecule with the SH3 domain of STAM 11.8e-0754.76Show/hide
Query:  SNPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRSS
        SN +K+ ETCG+L   L    FY+T LIIPKQESTS+S +++
Subjt:  SNPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRSS

AT4G16144.1 associated molecule with the SH3 domain of STAM 31.1e-0758.54Show/hide
Query:  SNPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS
        SN E++ ETCGVL   L    F++TTLIIPKQESTS+S ++
Subjt:  SNPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTAACCCGGAGAAAGATCCCGAGACCTGTGGAGTTCTTGGAGCCTATCTAGATAAAGGAACCTTCTATGTGACTACGCTTATCATACCAAAACAGGAATCGACTTCCAA
TTCTGTTAGATCATCGCCTCCCTTAACCTTTATTCCTTGGTTTATTTTGAAGATCGCCCTCTAA
mRNA sequenceShow/hide mRNA sequence
AGTAACCCGGAGAAAGATCCCGAGACCTGTGGAGTTCTTGGAGCCTATCTAGATAAAGGAACCTTCTATGTGACTACGCTTATCATACCAAAACAGGAATCGACTTCCAA
TTCTGTTAGATCATCGCCTCCCTTAACCTTTATTCCTTGGTTTATTTTGAAGATCGCCCTCTAA
Protein sequenceShow/hide protein sequence
SNPEKDPETCGVLGAYLDKGTFYVTTLIIPKQESTSNSVRSSPPLTFIPWFILKIAL