CuGenDBv2

Gene ID	Lsi09G000210
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	protein DEFECTIVE IN MERISTEM SILENCING 3
Genome location	chr09:179635..184713
RNA-Seq Expression	Lsi09G000210
Synteny	Lsi09G000210
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7016820.1 Protein DEFECTIVE IN MERISTEM SILENCING 3, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.1e-183

83.63

Show/hide

Query:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKY-HSSGTSVAENEVH
        MQVDQSD    VRND  NG F HAEYIFN+SKKL+EDLQTFGMKIKQHEDNIKFLKTQK+KLDESILDLQ          VILGKY HSSGT VAENE+H
Subjt:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKY-HSSGTSVAENEVH

Query:  SHPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGY--------GTYEGVKVLETYDKEGCINKSLG
        SHPQ+DEETM+QIM+QEKSAA IICKLS HH IQAYN+MLTKDVLGIVARLGKVDDDNLS      +G          TYEGVK LE YDKEGCINKS G
Subjt:  SHPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGY--------GTYEGVKVLETYDKEGCINKSLG

Query:  LHGLGASIGRNLDGRPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRADMLQALPCIS
        +HGLGASIGRNLDGRPY GDFIANDPQRRLDL+KPRLPNGECPPGFLGFAVNMI+IDS H+FCLAANGYGLRETLFYSLFSRLQVYKTRADMLQALPCIS
Subjt:  LHGLGASIGRNLDGRPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRADMLQALPCIS

Query:  DGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTESSSYAAQ
        DGALSLDGG+IKATGVFCLGNQEDVQLRFPKASMKSSLPENYIES RQIKELKWKKEKM+EDI+RE ALLDN+K+NFDRKKAEFLKFL ESSSYAAQ
Subjt:  DGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTESSSYAAQ

XP_004145932.1 protein DEFECTIVE IN MERISTEM SILENCING 3 [Cucumis sativus]

1.1e-188

86.21

Show/hide

Query:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS
        MQVDQSDK L VRNDM NGS+PHAEYIFNYSKKLEEDL  FGMKIKQHEDNIKFLKTQKNKLDESILDLQ          VILGKYHSSGT V ENEVHS
Subjt:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS

Query:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGY--------GTYEGVKVLETYDKEGCINKSLGL
        H  NDEET EQIM+QEKSAASIICKL+ HHGIQAYNLMLTKDVLGIVARLG+VDDDNLS      +G          TYEGVKVLETYDKEG INKSLGL
Subjt:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGY--------GTYEGVKVLETYDKEGCINKSLGL

Query:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD
        HGLGASIGRNLDG          RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTR D
Subjt:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD

Query:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES
        MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPK SMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTK NFDRKKAEFLKFLTES
Subjt:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES

Query:  SSYAAQ
        SSYAAQ
Subjt:  SSYAAQ

XP_008437605.1 PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3 [Cucumis melo]

5.5e-188

86.21

Show/hide

Query:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS
        +QVDQSDK         NGS+PHAEYIFNYSKKLEEDL  FGMKIKQHEDNIKFLKTQKNKLDESILDLQ          VILGKYHSSGT V ENEVHS
Subjt:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS

Query:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGY--------GTYEGVKVLETYDKEGCINKSLGL
        H QNDEETMEQIMRQEKSAASIICKLSTHHG+QAYNLMLTKDVLGIVARLGKVDDDNLS      +G          TYEGVKVLETYDKEGCINKSLGL
Subjt:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGY--------GTYEGVKVLETYDKEGCINKSLGL

Query:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD
        HGLGASIGRNLDG          RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD
Subjt:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD

Query:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES
        MLQALPCISDGA+SLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKM+EDIRREQALLDNTKVNFDRKKAEFLKFLTES
Subjt:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES

Query:  SSYAAQ
        SSYAAQ
Subjt:  SSYAAQ

XP_022158037.1 protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1 [Momordica charantia]

1.4e-183

83.05

Show/hide

Query:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTS-VAENEVH
        MQVDQ DK L VRNDM NG FPHAEYI NYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNK DESILDLQ          V+LGKYHSSGT+ VAENEVH
Subjt:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTS-VAENEVH

Query:  SHPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGY--------GTYEGVKVLETYDKEGCINKSLG
        SHPQ+DEETMEQIMRQE SAA I+CKLSTHH IQAYNLM TKDVLGIVARLGKVDDDNLS      +G          TY+GVK LETYD+EGCINKS G
Subjt:  SHPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGY--------GTYEGVKVLETYDKEGCINKSLG

Query:  LHGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRA
        LHGLGASIGR LDG          RPYAG FIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCL ANGYGLRETLFYSLFSRLQVYKTRA
Subjt:  LHGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRA

Query:  DMLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTE
        DMLQALPCISDGALSLDGG+IKATGVFCLGNQEDVQLRFPKAS+KSSLPENYIESERQIKELKWKKEK++EDI+REQALLDN+K++FDRKKAEFLKFL E
Subjt:  DMLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTE

Query:  SSSYAAQ
        SSSYAAQ
Subjt:  SSSYAAQ

XP_038875900.1 protein DEFECTIVE IN MERISTEM SILENCING 3-like [Benincasa hispida]

2.7e-195

88.67

Show/hide

Query:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS
        MQVDQSDK L VRNDM NGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQ          VILGKYHSSGT VAENEVHS
Subjt:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS

Query:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGY--------GTYEGVKVLETYDKEGCINKSLGL
        HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNL+LTKDVLGIVARLGKVDDDNLS      +G          TYEGVKVLETYDKEGCINKSLGL
Subjt:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGY--------GTYEGVKVLETYDKEGCINKSLGL

Query:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD
        HGLGASIGRNLDG          R YAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINID+THLFCLAANGYGLRETLFYSLFSRLQVYKTRAD
Subjt:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD

Query:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES
        MLQALPCISDGALSLDGGMIKATGVFCLG+QEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTK+NFDRKKAEFLKFLTES
Subjt:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES

Query:  SSYAAQ
        SSYAAQ
Subjt:  SSYAAQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KN76 Uncharacterized protein

5.4e-189

86.21

Show/hide

Query:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS
        MQVDQSDK L VRNDM NGS+PHAEYIFNYSKKLEEDL  FGMKIKQHEDNIKFLKTQKNKLDESILDLQ          VILGKYHSSGT V ENEVHS
Subjt:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS

Query:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGY--------GTYEGVKVLETYDKEGCINKSLGL
        H  NDEET EQIM+QEKSAASIICKL+ HHGIQAYNLMLTKDVLGIVARLG+VDDDNLS      +G          TYEGVKVLETYDKEG INKSLGL
Subjt:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGY--------GTYEGVKVLETYDKEGCINKSLGL

Query:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD
        HGLGASIGRNLDG          RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTR D
Subjt:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD

Query:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES
        MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPK SMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTK NFDRKKAEFLKFLTES
Subjt:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES

Query:  SSYAAQ
        SSYAAQ
Subjt:  SSYAAQ

A0A1S3AV19 protein DEFECTIVE IN MERISTEM SILENCING 3

2.7e-188

86.21

Show/hide

Query:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS
        +QVDQSDK         NGS+PHAEYIFNYSKKLEEDL  FGMKIKQHEDNIKFLKTQKNKLDESILDLQ          VILGKYHSSGT V ENEVHS
Subjt:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS

Query:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGY--------GTYEGVKVLETYDKEGCINKSLGL
        H QNDEETMEQIMRQEKSAASIICKLSTHHG+QAYNLMLTKDVLGIVARLGKVDDDNLS      +G          TYEGVKVLETYDKEGCINKSLGL
Subjt:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGY--------GTYEGVKVLETYDKEGCINKSLGL

Query:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD
        HGLGASIGRNLDG          RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD
Subjt:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD

Query:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES
        MLQALPCISDGA+SLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKM+EDIRREQALLDNTKVNFDRKKAEFLKFLTES
Subjt:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES

Query:  SSYAAQ
        SSYAAQ
Subjt:  SSYAAQ

A0A6J1DW45 protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1

6.8e-184

83.05

Show/hide

Query:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTS-VAENEVH
        MQVDQ DK L VRNDM NG FPHAEYI NYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNK DESILDLQ          V+LGKYHSSGT+ VAENEVH
Subjt:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTS-VAENEVH

Query:  SHPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGY--------GTYEGVKVLETYDKEGCINKSLG
        SHPQ+DEETMEQIMRQE SAA I+CKLSTHH IQAYNLM TKDVLGIVARLGKVDDDNLS      +G          TY+GVK LETYD+EGCINKS G
Subjt:  SHPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGY--------GTYEGVKVLETYDKEGCINKSLG

Query:  LHGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRA
        LHGLGASIGR LDG          RPYAG FIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCL ANGYGLRETLFYSLFSRLQVYKTRA
Subjt:  LHGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRA

Query:  DMLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTE
        DMLQALPCISDGALSLDGG+IKATGVFCLGNQEDVQLRFPKAS+KSSLPENYIESERQIKELKWKKEK++EDI+REQALLDN+K++FDRKKAEFLKFL E
Subjt:  DMLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTE

Query:  SSSYAAQ
        SSSYAAQ
Subjt:  SSSYAAQ

A0A6J1H2Y5 protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1

4.9e-182

82.02

Show/hide

Query:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS
        MQVDQSDK L +  DM NG F HAEYIFN+SKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQ          VILGKYHSSGT VAENEVHS
Subjt:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS

Query:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDN----LSSY----DKVKIGYGTYEGVKVLETYDKEGCINKSLGL
        HPQ++EETMEQIMRQE SAA IIC+L+THHGIQAYN+ LTKDVLGIVARLGK+DDDN    LS Y      + I   TY+GVK+LETYDKEGCINKS GL
Subjt:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDN----LSSY----DKVKIGYGTYEGVKVLETYDKEGCINKSLGL

Query:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD
        HGLGASIGRNLDG          RPYAGDFI NDPQRRLDLLKPRLPNGECPPGF+GFAVNMINIDSTHLFC AANGYGLRETLFYSLFSRLQVYKTR D
Subjt:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD

Query:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES
        MLQALPCISDGALSLDGG+IKA G+FCLGNQEDVQLRFPKASMKSSLPE+YIESERQ+KELKWKKEKM+EDI+REQALL+N+K+NFDRKKAEFLKFL ES
Subjt:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES

Query:  SSYAAQ
        SSYAAQ
Subjt:  SSYAAQ

A0A6J1K029 protein DEFECTIVE IN MERISTEM SILENCING 3-like isoform X1

2.2e-182

82.27

Show/hide

Query:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS
        MQVDQSDK L +  DM NG F HAEYIFN+SKKLEEDLQTFGMKIKQHEDNIKFL TQK KLDESILDLQ       F  VILGKYHSSGT VAENEVHS
Subjt:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS

Query:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDN----LSSY----DKVKIGYGTYEGVKVLETYDKEGCINKSLGL
        HPQ++EETMEQIM+QEKSAA IIC+L+THHGIQAYN+ LTKDVLGIVARLGKVDDDN    LS Y      + I   TY+GVK+LETYDKEGCINKS GL
Subjt:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDN----LSSY----DKVKIGYGTYEGVKVLETYDKEGCINKSLGL

Query:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD
        HGLGASIGRNLDG          RPYAGDFI NDPQRRLDLLKPRLPNGECPPGF+GFAVNMINIDSTHLFC AANGYGLRETLFYSLFSRLQVYKTRAD
Subjt:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD

Query:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES
        MLQALPCISDGALSLDGG+IKA G+FCLGNQEDVQLRFPKASMKSSLPE+YIESERQ+KELKWKKEKM+EDI+REQALL+N+K+NFDRKKAEFLKFL ES
Subjt:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES

Query:  SSYAAQ
        SSYAAQ
Subjt:  SSYAAQ

SwissProt top hits

e value

%identity

Alignment

F4KFS5 Structural maintenance of chromosomes flexible hinge domain-containing protein GMI1

5.8e-23

32.17

Show/hide

Query:  EETMEQI-MRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGYGTYEGVKVLETYDKEGCINKSLGLHGLGASIGRNLD
        E  M+QI  +   +AAS+ C L           +  K + G+VA LG V   +LS      +G  T   + V ++       ++        AS+GR++ 
Subjt:  EETMEQI-MRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGYGTYEGVKVLETYDKEGCINKSLGLHGLGASIGRNLD

Query:  G----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRADMLQALPCISDG-
                   RP+    + NDPQ+RL +  P LPNG+  PGF G+AVNMI++ S  L   +++GYGLRETLFY +F  LQVY+T   +  ALP I+ G 
Subjt:  G----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRADMLQALPCISDG-

Query:  ALSLDGGMIKATGVFCLG--------------NQED--VQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDN
        A+SLDG + +  G    G               QE   VQL   +   K    E   E  R ++ L  K +K  E  +   A+ D+
Subjt:  ALSLDGGMIKATGVFCLG--------------NQED--VQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDN

Q94A79 Protein DEFECTIVE IN MERISTEM SILENCING 3

1.9e-106

52.87

Show/hide

Query:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS
        M +DQS  P+A     + G   HAE+    SK+LE DL+  G KIKQHEDN+KFLK+QKNK+DE+I+DLQ          V + K +SS T  +EN  +S
Subjt:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS

Query:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGYGT--------YEGVKVLETYDKEGCINKSLGL
             E+   QI+R E SAA ++  + T HG QA  LMLTK V+G+VA+LGKV+D+NLS      +G  +        YE V  LE YD  G I+ + GL
Subjt:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGYGT--------YEGVKVLETYDKEGCINKSLGL

Query:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD
        H LG+SIGR +            RPY G  IA+D QRRLDLLKP+LPNGECPPGFLGFAVNMI ID  +L C+ + GYGLRETLFY+LFSRLQVYKTRAD
Subjt:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD

Query:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES
        M+ ALPCISDGA+SLDGG+I+ TG+F LGN+++V +RF K +   ++ +NY E+E+++KELKWKKEK +EDI+REQ L ++   NF +KK EF++ L +S
Subjt:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES

Query:  S
        S
Subjt:  S

Arabidopsis top hits

e value

%identity

Alignment

AT3G49250.1 defective in meristem silencing 3

1.3e-107

52.87

Show/hide

Query:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS
        M +DQS  P+A     + G   HAE+    SK+LE DL+  G KIKQHEDN+KFLK+QKNK+DE+I+DLQ          V + K +SS T  +EN  +S
Subjt:  MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHS

Query:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGYGT--------YEGVKVLETYDKEGCINKSLGL
             E+   QI+R E SAA ++  + T HG QA  LMLTK V+G+VA+LGKV+D+NLS      +G  +        YE V  LE YD  G I+ + GL
Subjt:  HPQNDEETMEQIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGYGT--------YEGVKVLETYDKEGCINKSLGL

Query:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD
        H LG+SIGR +            RPY G  IA+D QRRLDLLKP+LPNGECPPGFLGFAVNMI ID  +L C+ + GYGLRETLFY+LFSRLQVYKTRAD
Subjt:  HGLGASIGRNLDG----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRAD

Query:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES
        M+ ALPCISDGA+SLDGG+I+ TG+F LGN+++V +RF K +   ++ +NY E+E+++KELKWKKEK +EDI+REQ L ++   NF +KK EF++ L +S
Subjt:  MLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTES

Query:  S
        S
Subjt:  S

AT5G24280.1 gamma-irradiation and mitomycin c induced 1

4.1e-24

32.17

Show/hide

Query:  EETMEQI-MRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGYGTYEGVKVLETYDKEGCINKSLGLHGLGASIGRNLD
        E  M+QI  +   +AAS+ C L           +  K + G+VA LG V   +LS      +G  T   + V ++       ++        AS+GR++ 
Subjt:  EETMEQI-MRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGYGTYEGVKVLETYDKEGCINKSLGLHGLGASIGRNLD

Query:  G----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRADMLQALPCISDG-
                   RP+    + NDPQ+RL +  P LPNG+  PGF G+AVNMI++ S  L   +++GYGLRETLFY +F  LQVY+T   +  ALP I+ G 
Subjt:  G----------RPYAGDFIANDPQRRLDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRADMLQALPCISDG-

Query:  ALSLDGGMIKATGVFCLG--------------NQED--VQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDN
        A+SLDG + +  G    G               QE   VQL   +   K    E   E  R ++ L  K +K  E  +   A+ D+
Subjt:  ALSLDGGMIKATGVFCLG--------------NQED--VQLRFPKASMKSSLPENYIESERQIKELKWKKEKMVEDIRREQALLDN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCAAGTCGATCAGAGCGACAAGCCGTTAGCTGTGAGAAATGATATGCACAATGGGAGCTTCCCACATGCCGAATACATCTTCAACTACTCCAAGAAACTTGAAGAGGA
TCTACAGACGTTTGGAATGAAAATAAAGCAGCACGAGGACAACATTAAATTTCTCAAAACTCAGAAAAACAAATTAGATGAATCCATCCTCGACTTGCAAGGTATTTTTT
CTATAATTAATTTTCTTTCAGTTATTCTAGGCAAGTATCATTCTTCTGGCACATCTGTGGCCGAAAACGAGGTTCATTCCCATCCTCAAAACGATGAGGAAACGATGGAA
CAGATTATGCGGCAGGAGAAGTCTGCTGCTAGCATTATATGTAAATTGAGCACACATCATGGTATTCAGGCTTACAACCTCATGTTGACCAAGGATGTACTGGGTATTGT
TGCTCGGCTTGGGAAAGTTGATGATGATAATCTTAGCAGTTATGATAAAGTTAAAATTGGATATGGAACATACGAGGGAGTTAAGGTGCTAGAAACATATGACAAGGAAG
GTTGCATAAACAAAAGTCTTGGCCTTCATGGTCTTGGTGCTTCAATTGGGAGGAACTTGGATGGCCGACCATATGCTGGTGACTTTATTGCCAATGACCCGCAAAGGAGG
CTTGACCTTCTAAAGCCAAGATTACCTAACGGGGAGTGTCCACCTGGCTTTCTTGGCTTTGCTGTTAACATGATCAATATTGATAGCACACACTTGTTTTGTCTCGCAGC
CAATGGATATGGTCTCAGGGAGACCCTGTTCTATTCTCTCTTTTCTCGTCTTCAAGTATATAAAACCAGAGCAGACATGCTACAAGCTCTCCCTTGCATTAGTGATGGTG
CACTTTCTTTAGATGGAGGAATGATTAAAGCTACTGGTGTTTTTTGCTTGGGCAATCAGGAAGATGTTCAGTTGAGATTCCCAAAGGCCTCCATGAAATCAAGCCTACCT
GAAAATTACATTGAATCTGAGAGGCAGATTAAAGAACTCAAGTGGAAAAAGGAAAAGATGGTTGAAGATATAAGGAGAGAACAAGCATTGCTGGACAATACTAAGGTCAA
TTTTGACAGGAAAAAGGCAGAGTTTCTAAAGTTCCTGACTGAAAGCTCATCATACGCAGCTCAGATTTTGACTCTCCTCTTCTGCTTCTTCTTCCTGTTCTTAAACCACT
ACATTTCTGCTTCTGTTGAGTAA

mRNA sequence

Show/hide mRNA sequence

GAGAAAAAAAAAAAGAAAAGAAAGAGAGAGAGAGAAAAAAAAAAAGGAAAAGAAAAGAGGGAAAGAGAAAGAGAGGAAGCATCAAATCGAATTGGGCATTTGACCTTGGA
CTACTGCAGAACCAGACCTCCACAGAGCGAAGCCAGGAGGTGGAGACTGGACGCCGGAGGCCGGAGGCCGGAATTTCTCAATTCTCCTCTCATCTCATCTCATCTCATCA
GCCGGCCATGTTTCACCCAAACAATATGCAGGCATCTCTCTTCCCCTTACTATATCTCTTTACTTTCTCACAAACTCTGAGGAAATTTTTCTGTCTGCAACTCCGGCGAT
TCTGTACTCGTAGACCTACAATTTCATTGTTTCTGTTAAAAAGCTTGTTGGGTTTGAGTTTTGGAGAAATTGGAGTGGAGAGCTTGTTGGCTGGCTATTCGGATACCGAC
CTCGCCTGCCCAAGATTCTACGCAGTATATGCAAGTCGATCAGAGCGACAAGCCGTTAGCTGTGAGAAATGATATGCACAATGGGAGCTTCCCACATGCCGAATACATCT
TCAACTACTCCAAGAAACTTGAAGAGGATCTACAGACGTTTGGAATGAAAATAAAGCAGCACGAGGACAACATTAAATTTCTCAAAACTCAGAAAAACAAATTAGATGAA
TCCATCCTCGACTTGCAAGGTATTTTTTCTATAATTAATTTTCTTTCAGTTATTCTAGGCAAGTATCATTCTTCTGGCACATCTGTGGCCGAAAACGAGGTTCATTCCCA
TCCTCAAAACGATGAGGAAACGATGGAACAGATTATGCGGCAGGAGAAGTCTGCTGCTAGCATTATATGTAAATTGAGCACACATCATGGTATTCAGGCTTACAACCTCA
TGTTGACCAAGGATGTACTGGGTATTGTTGCTCGGCTTGGGAAAGTTGATGATGATAATCTTAGCAGTTATGATAAAGTTAAAATTGGATATGGAACATACGAGGGAGTT
AAGGTGCTAGAAACATATGACAAGGAAGGTTGCATAAACAAAAGTCTTGGCCTTCATGGTCTTGGTGCTTCAATTGGGAGGAACTTGGATGGCCGACCATATGCTGGTGA
CTTTATTGCCAATGACCCGCAAAGGAGGCTTGACCTTCTAAAGCCAAGATTACCTAACGGGGAGTGTCCACCTGGCTTTCTTGGCTTTGCTGTTAACATGATCAATATTG
ATAGCACACACTTGTTTTGTCTCGCAGCCAATGGATATGGTCTCAGGGAGACCCTGTTCTATTCTCTCTTTTCTCGTCTTCAAGTATATAAAACCAGAGCAGACATGCTA
CAAGCTCTCCCTTGCATTAGTGATGGTGCACTTTCTTTAGATGGAGGAATGATTAAAGCTACTGGTGTTTTTTGCTTGGGCAATCAGGAAGATGTTCAGTTGAGATTCCC
AAAGGCCTCCATGAAATCAAGCCTACCTGAAAATTACATTGAATCTGAGAGGCAGATTAAAGAACTCAAGTGGAAAAAGGAAAAGATGGTTGAAGATATAAGGAGAGAAC
AAGCATTGCTGGACAATACTAAGGTCAATTTTGACAGGAAAAAGGCAGAGTTTCTAAAGTTCCTGACTGAAAGCTCATCATACGCAGCTCAGATTTTGACTCTCCTCTTC
TGCTTCTTCTTCCTGTTCTTAAACCACTACATTTCTGCTTCTGTTGAGTAAAGCAACAACTCTCAGCCAAGCCAGAGAGGTTGACACCACGATGAAATTTGCAGTAGAGA
ACCAAGTCTTCCACTGAACAACTTGGGGGAGGAACTTTCAGCTGCAATATTTAAATCTGCGAAAATGTATAAGCTTCTTATTGCATTTTTGAGGTAAATATCTTATGGTT
TAGCTGAAAATTTTCAAAGGAATGGAATAGGGAGTGGCATGGCATCTGTAGTTCCTCTCTGGAATAGGCATTTTTTTAGTGCTTGCTATCTAAATTTGTTGAGACTTATG
TTCTTGACAGAGGAGACAATGGTTCTCTTGCCTTGCAGTAATCTAGATGGGATGGCGGTTTGTATTGGTCACCTTTTTCTTAAAACTAAAAAAAAAAGGTTAAAAGTATG
CTCTCTCTCTTAGTAACTTTTTATTTATTTATTCTAAAATTTACAAATATTCTAATTGTTTTTAGAACCACTTAAATTGTGGAGTTTGTTTTTCTTCTTTAATTATGGTT
TAAAATAATGATTTTGAATGATGGACTTTGAGGTGAGCTTTAGGGACTAAAGAATGTGGGGAAAAGTATAATGCGTGTTTACATTATAAACTTACCTTCATAAATATTTA
TGGTTTTTATCATAAATTTTATTCTTGA

Protein sequence

Show/hide protein sequence

MQVDQSDKPLAVRNDMHNGSFPHAEYIFNYSKKLEEDLQTFGMKIKQHEDNIKFLKTQKNKLDESILDLQGIFSIINFLSVILGKYHSSGTSVAENEVHSHPQNDEETME
QIMRQEKSAASIICKLSTHHGIQAYNLMLTKDVLGIVARLGKVDDDNLSSYDKVKIGYGTYEGVKVLETYDKEGCINKSLGLHGLGASIGRNLDGRPYAGDFIANDPQRR
LDLLKPRLPNGECPPGFLGFAVNMINIDSTHLFCLAANGYGLRETLFYSLFSRLQVYKTRADMLQALPCISDGALSLDGGMIKATGVFCLGNQEDVQLRFPKASMKSSLP
ENYIESERQIKELKWKKEKMVEDIRREQALLDNTKVNFDRKKAEFLKFLTESSSYAAQILTLLFCFFFLFLNHYISASVE

Lsi09G000210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome