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Lsi09G000620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G000620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWD repeat-containing protein 91-like protein
Genome locationchr09:484364..488041
RNA-Seq ExpressionLsi09G000620
SyntenyLsi09G000620
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33782.1 hypothetical protein [Cucumis melo subsp. melo]1.4e-1347.1Show/hide
Query:  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIAC-----------------LKLLRPCPSIALIGGW---------------------FWNHLDMI
        M   ELK  FD LK++AE QEQRVRYYETRAQNVAIAC                 L LL   P + ++ G+                       N LD+I
Subjt:  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIAC-----------------LKLLRPCPSIALIGGW---------------------FWNHLDMI

Query:  LKKQIEISQQILN----DDDEAGDSSSSD--GLELSFQ
         KKQIEIS QILN    +DDEAGD+ SSD  GLELSFQ
Subjt:  LKKQIEISQQILN----DDDEAGDSSSSD--GLELSFQ

KAA0042578.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa]1.0e-1144.93Show/hide
Query:  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIAC-----------------LKLLRPCPSIALIGGW---------------------FWNHLDMI
        M F+ELK KFD LK +AE QEQRVRYYETRAQNV IAC                 L LL     + ++ G+                       N LD+I
Subjt:  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIAC-----------------LKLLRPCPSIALIGGW---------------------FWNHLDMI

Query:  LKKQIEISQQILN----DDDEAGDSSSSDG--LELSFQ
         K+Q EISQQILN    DD E GDS SSD   LELSF+
Subjt:  LKKQIEISQQILN----DDDEAGDSSSSDG--LELSFQ

KAA0042580.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa]1.2e-1246.62Show/hide
Query:  LKGKFDELKVVAENQEQRVRYYETRAQNVAIAC-----------------LKLLRPCPSIALIGGW---------------------FWNHLDMILKKQI
        LK  FD LK++AE QEQRVRYYETRAQNVAIAC                 L LL   P + ++ G+                       N LD+I K+QI
Subjt:  LKGKFDELKVVAENQEQRVRYYETRAQNVAIAC-----------------LKLLRPCPSIALIGGW---------------------FWNHLDMILKKQI

Query:  EISQQILN----DDDEAGDSSSSD--GLELSFQ
        EIS QILN    +DDEAGD+ SSD  GLELSFQ
Subjt:  EISQQILN----DDDEAGDSSSSD--GLELSFQ

XP_008437551.1 PREDICTED: uncharacterized protein LOC103482931 [Cucumis melo]1.4e-1347.1Show/hide
Query:  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIAC-----------------LKLLRPCPSIALIGGW---------------------FWNHLDMI
        M   ELK  FD LK++AE QEQRVRYYETRAQNVAIAC                 L LL   P + ++ G+                       N LD+I
Subjt:  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIAC-----------------LKLLRPCPSIALIGGW---------------------FWNHLDMI

Query:  LKKQIEISQQILN----DDDEAGDSSSSD--GLELSFQ
         KKQIEIS QILN    +DDEAGD+ SSD  GLELSFQ
Subjt:  LKKQIEISQQILN----DDDEAGDSSSSD--GLELSFQ

XP_011654636.1 uncharacterized protein LOC105435427 [Cucumis sativus]7.6e-1246.38Show/hide
Query:  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIACL--------KLLRPCPSIALIG--GWFW----------------------------NHLDMI
        M F ELK KFD LK +AE QEQRVRYYETRAQN+AIA L         +     S++L+      W                            N LD+I
Subjt:  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIACL--------KLLRPCPSIALIG--GWFW----------------------------NHLDMI

Query:  LKKQIEISQQILN----DDDEAGDSSSSDG--LELSFQ
         KKQIEIS QILN    +DDEAGDS SSD   LELSFQ
Subjt:  LKKQIEISQQILN----DDDEAGDSSSSDG--LELSFQ

TrEMBL top hitse value%identityAlignment
A0A0A0KM15 Uncharacterized protein3.7e-1246.38Show/hide
Query:  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIACL--------KLLRPCPSIALIG--GWFW----------------------------NHLDMI
        M F ELK KFD LK +AE QEQRVRYYETRAQN+AIA L         +     S++L+      W                            N LD+I
Subjt:  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIACL--------KLLRPCPSIALIG--GWFW----------------------------NHLDMI

Query:  LKKQIEISQQILN----DDDEAGDSSSSDG--LELSFQ
         KKQIEIS QILN    +DDEAGDS SSD   LELSFQ
Subjt:  LKKQIEISQQILN----DDDEAGDSSSSDG--LELSFQ

A0A1S3ATY9 uncharacterized protein LOC1034829316.7e-1447.1Show/hide
Query:  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIAC-----------------LKLLRPCPSIALIGGW---------------------FWNHLDMI
        M   ELK  FD LK++AE QEQRVRYYETRAQNVAIAC                 L LL   P + ++ G+                       N LD+I
Subjt:  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIAC-----------------LKLLRPCPSIALIGGW---------------------FWNHLDMI

Query:  LKKQIEISQQILN----DDDEAGDSSSSD--GLELSFQ
         KKQIEIS QILN    +DDEAGD+ SSD  GLELSFQ
Subjt:  LKKQIEISQQILN----DDDEAGDSSSSD--GLELSFQ

A0A5A7TGW8 WD repeat-containing protein 91-like protein5.7e-1346.62Show/hide
Query:  LKGKFDELKVVAENQEQRVRYYETRAQNVAIAC-----------------LKLLRPCPSIALIGGW---------------------FWNHLDMILKKQI
        LK  FD LK++AE QEQRVRYYETRAQNVAIAC                 L LL   P + ++ G+                       N LD+I K+QI
Subjt:  LKGKFDELKVVAENQEQRVRYYETRAQNVAIAC-----------------LKLLRPCPSIALIGGW---------------------FWNHLDMILKKQI

Query:  EISQQILN----DDDEAGDSSSSD--GLELSFQ
        EIS QILN    +DDEAGD+ SSD  GLELSFQ
Subjt:  EISQQILN----DDDEAGDSSSSD--GLELSFQ

A0A5D3C430 WD repeat-containing protein 91-like protein4.8e-1244.93Show/hide
Query:  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIAC-----------------LKLLRPCPSIALIGGW---------------------FWNHLDMI
        M F+ELK KFD LK +AE QEQRVRYYETRAQNV IAC                 L LL     + ++ G+                       N LD+I
Subjt:  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIAC-----------------LKLLRPCPSIALIGGW---------------------FWNHLDMI

Query:  LKKQIEISQQILN----DDDEAGDSSSSDG--LELSFQ
         K+Q EISQQILN    DD E GDS SSD   LELSF+
Subjt:  LKKQIEISQQILN----DDDEAGDSSSSDG--LELSFQ

E5GBE1 Uncharacterized protein6.7e-1447.1Show/hide
Query:  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIAC-----------------LKLLRPCPSIALIGGW---------------------FWNHLDMI
        M   ELK  FD LK++AE QEQRVRYYETRAQNVAIAC                 L LL   P + ++ G+                       N LD+I
Subjt:  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIAC-----------------LKLLRPCPSIALIGGW---------------------FWNHLDMI

Query:  LKKQIEISQQILN----DDDEAGDSSSSD--GLELSFQ
         KKQIEIS QILN    +DDEAGD+ SSD  GLELSFQ
Subjt:  LKKQIEISQQILN----DDDEAGDSSSSD--GLELSFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTGAAGAATTGAAGGGGAAATTTGATGAGCTGAAGGTTGTTGCTGAAAACCAAGAGCAGAGAGTGCGTTACTATGAAACTAGAGCCCAGAATGTAGCTATTGC
CTGTCTCAAACTTCTTCGTCCCTGTCCCTCAATTGCACTAATCGGTGGATGGTTTTGGAACCACTTGGACATGATTTTAAAGAAACAGATTGAAATCTCCCAACAGATTT
TGAATGATGATGATGAGGCTGGAGATTCAAGTTCAAGTGATGGGTTGGAGTTGAGTTTCCAGGGAAAGGATGCTACACTTATTGGATTGGATGCTGGTACCTATGCTTTA
GATGAATTAATCCATAGCCATCTCGACCTCGGAGGTGGTAGTAAAGTTAAAGAGATGACATCAGAGGCCAAAGCATATTTTACTTTTGGATTGGACTCCCATGTAAACCA
GTATGGTGATCTACATTGCAGGCTGATTGCAGAGCCTTCGACGAAAAAGAAATGCGAAGGAAACGCAGAGCAGACTGCAAGACGCGATATACAACCAAAAGAATTTGAAT
CCACAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTTGAAGAATTGAAGGGGAAATTTGATGAGCTGAAGGTTGTTGCTGAAAACCAAGAGCAGAGAGTGCGTTACTATGAAACTAGAGCCCAGAATGTAGCTATTGC
CTGTCTCAAACTTCTTCGTCCCTGTCCCTCAATTGCACTAATCGGTGGATGGTTTTGGAACCACTTGGACATGATTTTAAAGAAACAGATTGAAATCTCCCAACAGATTT
TGAATGATGATGATGAGGCTGGAGATTCAAGTTCAAGTGATGGGTTGGAGTTGAGTTTCCAGGGAAAGGATGCTACACTTATTGGATTGGATGCTGGTACCTATGCTTTA
GATGAATTAATCCATAGCCATCTCGACCTCGGAGGTGGTAGTAAAGTTAAAGAGATGACATCAGAGGCCAAAGCATATTTTACTTTTGGATTGGACTCCCATGTAAACCA
GTATGGTGATCTACATTGCAGGCTGATTGCAGAGCCTTCGACGAAAAAGAAATGCGAAGGAAACGCAGAGCAGACTGCAAGACGCGATATACAACCAAAAGAATTTGAAT
CCACAGAGTAA
Protein sequenceShow/hide protein sequence
MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIACLKLLRPCPSIALIGGWFWNHLDMILKKQIEISQQILNDDDEAGDSSSSDGLELSFQGKDATLIGLDAGTYAL
DELIHSHLDLGGGSKVKEMTSEAKAYFTFGLDSHVNQYGDLHCRLIAEPSTKKKCEGNAEQTARRDIQPKEFESTE