; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G000700 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G000700
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA-binding protein pno1-like
Genome locationchr09:590124..590798
RNA-Seq ExpressionLsi09G000700
SyntenyLsi09G000700
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR036612 - K Homology domain, type 1 superfamily
IPR039912 - Pre-rRNA-processing protein PNO1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042585.1 RNA-binding protein pno1-like [Cucumis melo var. makuwa]7.5e-11596.88Show/hide
Query:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVP+SMEVE VSSKT TEVGT+PPKPQF+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_004145908.1 RNA-binding protein pno1 [Cucumis sativus]8.9e-11697.32Show/hide
Query:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVP+SMEVE VSSKT TE+GTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPD+S
Subjt:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_008437547.1 PREDICTED: RNA-binding protein pno1-like [Cucumis melo]7.5e-11596.88Show/hide
Query:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVP+SMEVE VSSKT TEVGT+PPKPQF+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_022958607.1 RNA-binding protein pno1-like [Cucurbita moschata]1.6e-11295.54Show/hide
Query:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPISMEVE V SK+ TEVG LPPKP F+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_038874451.1 RNA-binding protein pno1-like [Benincasa hispida]5.2e-11698.21Show/hide
Query:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPISMEVE VSSKTATEVGTLPPKP+FDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

TrEMBL top hitse value%identityAlignment
A0A0A0KQC5 KH domain-containing protein4.3e-11697.32Show/hide
Query:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVP+SMEVE VSSKT TE+GTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPD+S
Subjt:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A1S3AUA6 RNA-binding protein pno1-like3.7e-11596.88Show/hide
Query:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVP+SMEVE VSSKT TEVGT+PPKPQF+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A5D3C450 RNA-binding protein pno1-like3.7e-11596.88Show/hide
Query:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVP+SMEVE VSSKT TEVGT+PPKPQF+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1H2A3 RNA-binding protein pno1-like7.6e-11395.54Show/hide
Query:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPISMEVE V SK+ TEVG LPPKP F+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1K1S8 RNA-binding protein pno1-like1.0e-11295.54Show/hide
Query:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPISMEVE V SK+ TEVG LPPKP F+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

SwissProt top hitse value%identityAlignment
A7RP64 RNA-binding protein pno14.4e-6560.2Show/hide
Query:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVIDAIALLRVD
        +P F P+K  ++  G+ + RK+ VP HRY+PLK+ WM+I+TP+ + +K+ IR NL +R VE++   +T DI  +QK+ADFV AF+LGF+V DA+AL+R+D
Subjt:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVIDAIALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        +L++ESFEI DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+A+TKIHILGSF NIKIAR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q29IG6 RNA-binding protein pno13.3e-6566.85Show/hide
Query:  QFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRG
        + RKVSVPPHRYS LK+ WM+I+TP+ + MK+ IR N+KAR+VEL+   +TPDI+NLQK ADFV AF+ GF+V DA+ALLR+++L+VE+FEIKDVKTLRG
Subjt:  QFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRG

Query:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        +H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LR+V +RL+ER
Subjt:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Q5F414 RNA-binding protein PNO12.2e-6458.1Show/hide
Query:  SSKTATEVGTLPPK-PQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFML
        ++++A   G  P K P F PL    +  G+ + RKV VP +RY+PLK+ WM+I+TPI + +++ IR NLK R VE+KT ++T D+S L K+ADFV AF+L
Subjt:  SSKTATEVGTLPPK-PQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFML

Query:  GFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLR
        GF V DA+AL+R+D+L++ESFE+ DVK L+G+HLSRAIGR++GK GKTKF IEN T+TRIV+AD+KIHILGSF NIK+AR ++C+LILGSP  KVY  +R
Subjt:  GFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLR

Query:  AVTARLAERF
        AV +R AERF
Subjt:  AVTARLAERF

Q6VBQ6 RNA-binding protein PNO11.4e-6359.69Show/hide
Query:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVIDAIALLRVD
        +P F P+   ++  G  + RKV+VP HRY+PLK+ W++I+TPI + +++ +R NLK R VE+KT  +T DI+ L K+ADF+ AF+LGF V DA+AL+R+D
Subjt:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVIDAIALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        EL++ESF++ DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+ADTKIHILGSF NIK+AR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q9VR89 RNA-binding protein pno13.0e-6665.24Show/hide
Query:  PHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFE
        P +    R + RKVSVPPHRYS LK+ WM+I+TP+ + MK+ IR N+KAR+VEL+   +TPDI+NLQ+ ADFV AF+ GF+V DA+ALLR+++L+VESFE
Subjt:  PHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFE

Query:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        IKDVKTLRG+H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LRAV +RL+ER
Subjt:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Arabidopsis top hitse value%identityAlignment
AT3G13230.1 RNA-binding KH domain-containing protein1.7e-9683.72Show/hide
Query:  MEVEVVSSKTATEVGT--LPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSAD
        MEVE     TATE GT  LPPKP F PLK HEM+DG+VQFRK++VPP+RYSPLKKAW++IYTPIYDQMK+DIRMNLKARKVELKTRADTPDISNLQKSAD
Subjt:  MEVEVVSSKTATEVGT--LPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSAD

Query:  FVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAG
        FVHAFMLGFD+ DAI+LLR+DELYVESFEIKDVKTL+GEHLSRAIGRLSGK GKTKFAIEN+TKTRIVIADT+IHILG+F+NIK+AR SLCSLI+GSPAG
Subjt:  FVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAG

Query:  KVYSKLRAVTARLAE
        KVYSKLR+V+ARL E
Subjt:  KVYSKLRAVTARLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTACTGAAGTCCCCATTTCCATGGAAGTGGAGGTAGTTTCAAGTAAAACGGCAACTGAAGTTGGCACCTTGCCACCAAAACCACAGTTTGACCCTCTAAAGCC
TCATGAGATGAATGATGGCCGAGTTCAGTTCCGAAAGGTATCTGTTCCTCCACATCGATATTCCCCTCTCAAGAAAGCATGGATGGAGATCTACACCCCGATATATGATC
AGATGAAAATCGACATCCGTATGAACCTCAAGGCTCGTAAAGTTGAACTGAAAACAAGAGCAGACACACCTGACATCAGTAACTTGCAAAAGAGTGCAGATTTTGTTCAC
GCCTTCATGCTCGGTTTTGATGTAATTGATGCCATTGCACTCTTACGAGTGGATGAACTCTATGTAGAATCCTTTGAGATCAAAGATGTTAAGACGCTTCGAGGCGAGCA
TTTGTCCCGTGCTATAGGCAGATTGTCTGGTAAAGCTGGTAAAACGAAGTTCGCCATTGAAAATGCTACAAAGACAAGGATAGTTATTGCAGACACCAAGATCCACATAT
TAGGATCCTTCGCCAACATCAAGATTGCTAGAGATTCTCTTTGCAGCCTCATTTTAGGTTCTCCAGCTGGAAAAGTTTATTCAAAACTAAGAGCAGTTACAGCCAGATTG
GCAGAAAGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCTACTGAAGTCCCCATTTCCATGGAAGTGGAGGTAGTTTCAAGTAAAACGGCAACTGAAGTTGGCACCTTGCCACCAAAACCACAGTTTGACCCTCTAAAGCC
TCATGAGATGAATGATGGCCGAGTTCAGTTCCGAAAGGTATCTGTTCCTCCACATCGATATTCCCCTCTCAAGAAAGCATGGATGGAGATCTACACCCCGATATATGATC
AGATGAAAATCGACATCCGTATGAACCTCAAGGCTCGTAAAGTTGAACTGAAAACAAGAGCAGACACACCTGACATCAGTAACTTGCAAAAGAGTGCAGATTTTGTTCAC
GCCTTCATGCTCGGTTTTGATGTAATTGATGCCATTGCACTCTTACGAGTGGATGAACTCTATGTAGAATCCTTTGAGATCAAAGATGTTAAGACGCTTCGAGGCGAGCA
TTTGTCCCGTGCTATAGGCAGATTGTCTGGTAAAGCTGGTAAAACGAAGTTCGCCATTGAAAATGCTACAAAGACAAGGATAGTTATTGCAGACACCAAGATCCACATAT
TAGGATCCTTCGCCAACATCAAGATTGCTAGAGATTCTCTTTGCAGCCTCATTTTAGGTTCTCCAGCTGGAAAAGTTTATTCAAAACTAAGAGCAGTTACAGCCAGATTG
GCAGAAAGGTTTTGA
Protein sequenceShow/hide protein sequence
MQSTEVPISMEVEVVSSKTATEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVH
AFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARL
AERF