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Lsi09G001090 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G001090
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTumor necrosis factor receptor family protein
Genome locationchr09:1037590..1038363
RNA-Seq ExpressionLsi09G001090
SyntenyLsi09G001090
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035535.1 hypothetical protein SDJN02_02332 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-2893.06Show/hide
Query:  IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        IQ I NADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQ+ASLVAQDLYGVVKQHGPLTVSNAW KAQ
Subjt:  IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
XP_004145885.1 uncharacterized protein LOC101211684 [Cucumis sativus]1.0e-2890.28Show/hide
Query:  IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        IQRIGNADGGGG AGLVF+TFAR+FSRKRAENLRKINPKLTPQ+ASLVAQDLYGVV+QHGPLT+SNAW KAQ
Subjt:  IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
XP_022159821.1 uncharacterized protein LOC111026127 [Momordica charantia]2.7e-2992.96Show/hide
Query:  QRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        QRIG+ADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQ+ASLVAQDLYGVVKQHGPL++SNAW KAQ
Subjt:  QRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
XP_022996189.1 uncharacterized protein LOC111491495 [Cucurbita maxima]1.0e-2893.06Show/hide
Query:  IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        IQ I NADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQ+ASLVAQDLYGVVKQHGPLTVSNAW KAQ
Subjt:  IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
XP_038876162.1 uncharacterized protein LOC120068455 [Benincasa hispida]6.3e-3197.22Show/hide
Query:  IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQ+ASLVAQDLYGVVKQHGPLTVSNAW KAQ
Subjt:  IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
TrEMBL top hitse value%identityAlignment
A0A0A0KK52 Uncharacterized protein4.9e-2990.28Show/hide
Query:  IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        IQRIGNADGGGG AGLVF+TFAR+FSRKRAENLRKINPKLTPQ+ASLVAQDLYGVV+QHGPLT+SNAW KAQ
Subjt:  IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
A0A1S3ATS9 uncharacterized protein LOC1034828885.4e-2887.5Show/hide
Query:  IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        IQRIGN DGGGG  GLVF+TFAR+FSRKRAENLRKINPKLTPQ+ASLVAQDLYGV++QHGPLTVSNAW KAQ
Subjt:  IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
A0A6J1E538 uncharacterized protein LOC1110261271.3e-2992.96Show/hide
Query:  QRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        QRIG+ADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQ+ASLVAQDLYGVVKQHGPL++SNAW KAQ
Subjt:  QRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
A0A6J1H3U5 uncharacterized protein LOC1114598521.4e-2891.67Show/hide
Query:  IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        IQ I NADGGGGSAGLVFSTF RYFSR RAENLRKINPKLTPQ+ASLVAQDLYGVVKQHGPLTVSNAW KAQ
Subjt:  IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
A0A6J1K817 uncharacterized protein LOC1114914954.9e-2993.06Show/hide
Query:  IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        IQ I NADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQ+ASLVAQDLYGVVKQHGPLTVSNAW KAQ
Subjt:  IQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73940.1 unknown protein7.8e-1144.87Show/hide
Query:  ADGGGG-----SAGLVF-------STFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        A GGGG      A  +F       S   RY SR+RA N+RKINPK+  Q+A  ++  LY + K HGPL+V N W +AQ
Subjt:  ADGGGG-----SAGLVF-------STFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGATCTCGACTCTCTCAGAATCTCGGAGTCTTGGCGGCAGCGGCAAACCAGTGCGACGGCGCGTAGTAGTAGTCAAAGACGAACATATCCAAAGAATTGGAAATGC
AGATGGAGGTGGAGGTTCTGCTGGCCTTGTGTTCAGCACATTTGCGAGGTATTTCTCGAGGAAGCGGGCAGAGAATCTTAGGAAGATCAATCCCAAGTTGACTCCTCAGG
ACGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTTGTCAAGCAGCACGGCCCTCTCACCGTTTCCAATGCTTGGACTAAAGCTCAGACATTCAACCACGAGTTGCTTGAT
CTAGGCTATGTTAACTCAGCGGCCACATTAGCTAAAGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGATCTCGACTCTCTCAGAATCTCGGAGTCTTGGCGGCAGCGGCAAACCAGTGCGACGGCGCGTAGTAGTAGTCAAAGACGAACATATCCAAAGAATTGGAAATGC
AGATGGAGGTGGAGGTTCTGCTGGCCTTGTGTTCAGCACATTTGCGAGGTATTTCTCGAGGAAGCGGGCAGAGAATCTTAGGAAGATCAATCCCAAGTTGACTCCTCAGG
ACGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTTGTCAAGCAGCACGGCCCTCTCACCGTTTCCAATGCTTGGACTAAAGCTCAGACATTCAACCACGAGTTGCTTGAT
CTAGGCTATGTTAACTCAGCGGCCACATTAGCTAAAGCCTGA
Protein sequenceShow/hide protein sequence
MTISTLSESRSLGGSGKPVRRRVVVVKDEHIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQTFNHELLD
LGYVNSAATLAKA