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Lsi09G001100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G001100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTumor necrosis factor receptor family protein
Genome locationchr09:1047368..1048991
RNA-Seq ExpressionLsi09G001100
SyntenyLsi09G001100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145885.1 uncharacterized protein LOC101211684 [Cucumis sativus]4.7e-2782.05Show/hide
Query:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKSP
        +S  W +  ESGV+GLNSKTHMKLLLKWMRGRKMLNLFCH VGSNKKFLLCTPDDP+AE+LK+SSEAG QRKK+AKSP
Subjt:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKSP

XP_008437479.1 PREDICTED: uncharacterized protein LOC103482888 [Cucumis melo]1.1e-2578.21Show/hide
Query:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKSP
        +S  W +  ESGV+GLNSKTHMKLLLKWMRGR+MLNLFCH VGSNKKFLLCTPDDP+AE+LK+ SE+G QRKK+AKSP
Subjt:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKSP

XP_022958708.1 uncharacterized protein LOC111459852 [Cucurbita moschata]2.0e-2275.32Show/hide
Query:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKS
        +S  W +  ESGV GLNSKTHMKLLLKWMRGRKML LFC+QVGSNKKFLL TPDDP+AE+LKS+SE  VQR+KK K+
Subjt:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKS

XP_023534502.1 uncharacterized protein LOC111796041 [Cucurbita pepo subsp. pepo]2.0e-2275.32Show/hide
Query:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKS
        +S  W +  ESGV GLNSKTHMKLLLKWMRGRKML LFC+QVGSNKKFLL TPDDP+AE+LKS+SE  VQR+KK K+
Subjt:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKS

XP_038876162.1 uncharacterized protein LOC120068455 [Benincasa hispida]3.2e-2882.5Show/hide
Query:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKSPME
        +S  W +  ESGV+GLNSKTHMKLLLKWMRGRKMLNLFC+QVGSNKKFLLCTPDDP+AEQLKSSSE+GVQRKK+AKSP++
Subjt:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKSPME

TrEMBL top hitse value%identityAlignment
A0A0A0KK52 Uncharacterized protein2.3e-2782.05Show/hide
Query:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKSP
        +S  W +  ESGV+GLNSKTHMKLLLKWMRGRKMLNLFCH VGSNKKFLLCTPDDP+AE+LK+SSEAG QRKK+AKSP
Subjt:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKSP

A0A1S3ATS9 uncharacterized protein LOC1034828885.5e-2678.21Show/hide
Query:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKSP
        +S  W +  ESGV+GLNSKTHMKLLLKWMRGR+MLNLFCH VGSNKKFLLCTPDDP+AE+LK+ SE+G QRKK+AKSP
Subjt:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKSP

A0A6J1E538 uncharacterized protein LOC1110261272.8e-2274.68Show/hide
Query:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCT-PDDPQAEQLKSSSEAGVQRKKKAKSP
        +S  W +  E GVSGLNSKTHMKL+LKWMRGRKML L C+QVGSNKKFLL T PDDPQA+QLKSSSE GVQR+K+ K P
Subjt:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCT-PDDPQAEQLKSSSEAGVQRKKKAKSP

A0A6J1H3U5 uncharacterized protein LOC1114598529.8e-2375.32Show/hide
Query:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKS
        +S  W +  ESGV GLNSKTHMKLLLKWMRGRKML LFC+QVGSNKKFLL TPDDP+AE+LKS+SE  VQR+KK K+
Subjt:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKS

A0A6J1K817 uncharacterized protein LOC1114914953.7e-2274.03Show/hide
Query:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKS
        +S  W +  ESGV GLNSKTHMKLLLKWMRGRKML LFC+QVGSNKKFLL TP+DP+AE+LKS+SE  VQR+KK K+
Subjt:  MSGTW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73940.1 unknown protein3.9e-1660Show/hide
Query:  TW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFL-LCTPDDPQAEQLKSSSEAGVQRKKKAKS
        TW +  E+GVSGLNSKTHMKLLLKWMRG+KML L C+QVGS+KKF     P+DP  EQ  +  E   Q  KK +S
Subjt:  TW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFL-LCTPDDPQAEQLKSSSEAGVQRKKKAKS

AT5G49410.1 unknown protein1.8e-0853.06Show/hide
Query:  TW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCT
        TW +V E G+ GL SK HMK++L+WMR R+ L L C+ VG +K+FL  T
Subjt:  TW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCT

AT5G49410.2 unknown protein1.8e-0853.06Show/hide
Query:  TW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCT
        TW +V E G+ GL SK HMK++L+WMR R+ L L C+ VG +K+FL  T
Subjt:  TW-QVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAAGCCAATGATGACTAAATCCATCATGTCTGGGACTTGGCAAGTCCCTGAATCTGGCGTCAGTGGATTGAACAGCAAAACGCACATGAAGCTACTGCTGAAATG
GATGAGGGGAAGGAAGATGCTCAACCTTTTCTGCCACCAAGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGATGATCCTCAGGCAGAACAGTTGAAGAGTTCTT
CAGAAGCGGGAGTCCAGAGGAAGAAGAAAGCAAAGTCACCGATGGAGTTTTGGTCTTCTGGGTCTAAGCTTAAATTTGATGCAGAAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATAAAGCCAATGATGACTAAATCCATCATGTCTGGGACTTGGCAAGTCCCTGAATCTGGCGTCAGTGGATTGAACAGCAAAACGCACATGAAGCTACTGCTGAAATG
GATGAGGGGAAGGAAGATGCTCAACCTTTTCTGCCACCAAGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGATGATCCTCAGGCAGAACAGTTGAAGAGTTCTT
CAGAAGCGGGAGTCCAGAGGAAGAAGAAAGCAAAGTCACCGATGGAGTTTTGGTCTTCTGGGTCTAAGCTTAAATTTGATGCAGAAGCATAA
Protein sequenceShow/hide protein sequence
MIKPMMTKSIMSGTWQVPESGVSGLNSKTHMKLLLKWMRGRKMLNLFCHQVGSNKKFLLCTPDDPQAEQLKSSSEAGVQRKKKAKSPMEFWSSGSKLKFDAEA